RNA–Protein interactions for RNA: ENST00000589857.1

ZNF540-208, Transcript of zinc finger protein 540, humanhuman

TSL 4

Gene ZNF540, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-208ENST00000589857 PURBQ96QR8 312 aaKnown RBP11.67□□□□□ -0.54
ZNF540-208ENST00000589857 PTPN18Q99952 460 aa11.67□□□□□ -0.54
ZNF540-208ENST00000589857 NUDT12Q9BQG2 462 aa11.67□□□□□ -0.54
ZNF540-208ENST00000589857 OLFML3Q9NRN5 406 aa11.67□□□□□ -0.54
ZNF540-208ENST00000589857 AGPAT5Q9NUQ2 364 aa11.67□□□□□ -0.54
ZNF540-208ENST00000589857 TYW1Q9NV66 732 aaKnown RBP11.67□□□□□ -0.54
ZNF540-208ENST00000589857 RAB21Q9UL25 225 aa11.67□□□□□ -0.54
ZNF540-208ENST00000589857 FZD1Q9UP38 647 aa11.67□□□□□ -0.54
ZNF540-208ENST00000589857 JRKLQ9Y4A0 524 aa11.67□□□□□ -0.54
ZNF540-208ENST00000589857 PTCH2Q9Y6C5 1203 aa11.67□□□□□ -0.54
ZNF540-208ENST00000589857 MYH8P13535 1937 aa11.66□□□□□ -0.54
ZNF540-208ENST00000589857 ATP8B3O60423 1300 aa11.66□□□□□ -0.54
ZNF540-208ENST00000589857 TARSL2A2RTX5 802 aaKnown RBP11.66□□□□□ -0.54
ZNF540-208ENST00000589857 FANCGO15287 622 aa11.66□□□□□ -0.54
ZNF540-208ENST00000589857 MSH4O15457 936 aa11.66□□□□□ -0.54
ZNF540-208ENST00000589857 FAM13AO94988 1023 aa11.66□□□□□ -0.54
ZNF540-208ENST00000589857 PNMA6AP0CW24 399 aaPredicted RBP11.66□□□□□ -0.54
ZNF540-208ENST00000589857 PRLRP16471 622 aa11.66□□□□□ -0.54
ZNF540-208ENST00000589857 TCP1P17987 556 aaKnown RBP11.66□□□□□ -0.54
ZNF540-208ENST00000589857 KIF11P52732 1056 aa11.66□□□□□ -0.54
ZNF540-208ENST00000589857 HERVK_113P62684 666 aa11.66□□□□□ -0.54
ZNF540-208ENST00000589857 AMPD2Q01433 879 aa11.66□□□□□ -0.54
ZNF540-208ENST00000589857 SNAPC2Q13487 334 aa11.66□□□□□ -0.54
ZNF540-208ENST00000589857 ALCAMQ13740 583 aa11.66□□□□□ -0.54
ZNF540-208ENST00000589857 GIT2Q14161 759 aa11.66□□□□□ -0.54
ZNF540-208ENST00000589857 ECM1Q16610 540 aa11.66□□□□□ -0.54
ZNF540-208ENST00000589857 IFI16Q16666 785 aaKnown RBP11.66□□□□□ -0.54
ZNF540-208ENST00000589857 KNOP1Q1ED39 458 aaKnown RBP11.66□□□□□ -0.54
ZNF540-208ENST00000589857 LRCH2Q5VUJ6 765 aa11.66□□□□□ -0.54
ZNF540-208ENST00000589857 DCAF15Q66K64 600 aa11.66□□□□□ -0.54
ZNF540-208ENST00000589857 RRAGAQ7L523 313 aa11.66□□□□□ -0.54
ZNF540-208ENST00000589857 VPS36Q86VN1 386 aa11.66□□□□□ -0.54
ZNF540-208ENST00000589857 CAGE1Q8TC20 777 aa11.66□□□□□ -0.54
ZNF540-208ENST00000589857 LPAR1Q92633 364 aa11.66□□□□□ -0.54
ZNF540-208ENST00000589857 MS4A4AQ96JQ5 239 aa11.66□□□□□ -0.54
ZNF540-208ENST00000589857 NACC1Q96RE7 527 aa11.66□□□□□ -0.54
ZNF540-208ENST00000589857 EIF2AK1Q9BQI3 630 aaKnown RBP11.66□□□□□ -0.54
ZNF540-208ENST00000589857 PARD6BQ9BYG5 372 aa11.66□□□□□ -0.54
ZNF540-208ENST00000589857 KCTD10Q9H3F6 313 aa11.66□□□□□ -0.54
ZNF540-208ENST00000589857 ZHX3Q9H4I2 956 aa11.66□□□□□ -0.54
ZNF540-208ENST00000589857 FAM207AQ9NSI2 230 aaPredicted RBP11.66□□□□□ -0.54
ZNF540-208ENST00000589857 RNF14Q9UBS8 474 aa11.66□□□□□ -0.54
ZNF540-208ENST00000589857 ARMCX3Q9UH62 379 aaPredicted RBP11.66□□□□□ -0.54
ZNF540-208ENST00000589857 VAV3Q9UKW4 847 aa11.66□□□□□ -0.54
ZNF540-208ENST00000589857 ODF2LQ9ULJ1 636 aa11.66□□□□□ -0.54
ZNF540-208ENST00000589857 REXO2Q9Y3B8 237 aaKnown RBP11.66□□□□□ -0.54
ZNF540-208ENST00000589857 PCDHA2Q9Y5H9 948 aa11.66□□□□□ -0.54
ZNF540-208ENST00000589857 PCDHA13Q9Y5I0 950 aa11.66□□□□□ -0.54
ZNF540-208ENST00000589857 PJA2O43164 708 aa11.65□□□□□ -0.54
ZNF540-208ENST00000589857 GAS7O60861 476 aa11.65□□□□□ -0.54
ZNF540-208ENST00000589857 AFPP02771 609 aaKnown RBP11.65□□□□□ -0.54
ZNF540-208ENST00000589857 MAGEA1P43355 309 aa11.65□□□□□ -0.54
ZNF540-208ENST00000589857 UBXN2AP68543 259 aa11.65□□□□□ -0.54
ZNF540-208ENST00000589857 LACTBP83111 547 aaPredicted RBP11.65□□□□□ -0.54
ZNF540-208ENST00000589857 ITIH3Q06033 890 aa11.65□□□□□ -0.54
ZNF540-208ENST00000589857 LRRC41Q15345 812 aa11.65□□□□□ -0.54
ZNF540-208ENST00000589857 EPHA7Q15375 998 aa11.65□□□□□ -0.54
ZNF540-208ENST00000589857 TDRD12Q587J7 1177 aaKnown RBP11.65□□□□□ -0.54
ZNF540-208ENST00000589857 FAM83BQ5T0W9 1011 aa11.65□□□□□ -0.54
ZNF540-208ENST00000589857 POTEGQ6S5H5 508 aa11.65□□□□□ -0.54
ZNF540-208ENST00000589857 POTEEQ6S8J3 1075 aa11.65□□□□□ -0.54
ZNF540-208ENST00000589857 HDXQ7Z353 690 aa11.65□□□□□ -0.54
ZNF540-208ENST00000589857 ERO1BQ86YB8 467 aa11.65□□□□□ -0.54
ZNF540-208ENST00000589857 SLC17A8Q8NDX2 589 aa11.65□□□□□ -0.54
ZNF540-208ENST00000589857 RAET1EQ8TD07 263 aa11.65□□□□□ -0.54
ZNF540-208ENST00000589857 SCFD1Q8WVM8 642 aa11.65□□□□□ -0.54
ZNF540-208ENST00000589857 SLC5A5Q92911 643 aa11.65□□□□□ -0.54
ZNF540-208ENST00000589857 HPS3Q969F9 1004 aa11.65□□□□□ -0.54
ZNF540-208ENST00000589857 VTI1AQ96AJ9 217 aa11.65□□□□□ -0.54
ZNF540-208ENST00000589857 LENG9Q96B70 501 aa11.65□□□□□ -0.54
ZNF540-208ENST00000589857 OTUD5Q96G74 571 aa11.65□□□□□ -0.54
ZNF540-208ENST00000589857 NOX5Q96PH1 765 aa11.65□□□□□ -0.54
ZNF540-208ENST00000589857 RIT2Q99578 217 aa11.65□□□□□ -0.54
ZNF540-208ENST00000589857 MKNK1Q9BUB5 465 aa11.65□□□□□ -0.54
ZNF540-208ENST00000589857 LSM14BQ9BX40 385 aaKnown RBP11.65□□□□□ -0.54
ZNF540-208ENST00000589857 TEKT3Q9BXF9 490 aa11.65□□□□□ -0.54
ZNF540-208ENST00000589857 IRX2Q9BZI1 471 aaPredicted RBP11.65□□□□□ -0.54
ZNF540-208ENST00000589857 PLCB1Q9NQ66 1216 aa11.65□□□□□ -0.54
ZNF540-208ENST00000589857 TCEAL9Q9UHQ7 104 aa11.65□□□□□ -0.54
ZNF540-208ENST00000589857 PUF60Q9UHX1 559 aaKnown RBP11.65□□□□□ -0.54
ZNF540-208ENST00000589857 CTDP1Q9Y5B0 961 aaPredicted RBP11.65□□□□□ -0.54
ZNF540-208ENST00000589857 GTPBP10A4D1E9 387 aaKnown RBP11.64□□□□□ -0.55
ZNF540-208ENST00000589857 SPDYE5A6NIY4 337 aa11.64□□□□□ -0.55
ZNF540-208ENST00000589857 LRRC53A6NM62 1247 aa11.64□□□□□ -0.55
ZNF540-208ENST00000589857 FAM86B1E9PN63 330 aa11.64□□□□□ -0.55
ZNF540-208ENST00000589857 H0YGN5 161 aa11.64□□□□□ -0.55
ZNF540-208ENST00000589857 RBAK-RBAKDNI3L0D1 243 aa11.64□□□□□ -0.55
ZNF540-208ENST00000589857 WDR46O15213 610 aaKnown RBP11.64□□□□□ -0.55
ZNF540-208ENST00000589857 CFBP00751 764 aa11.64□□□□□ -0.55
ZNF540-208ENST00000589857 FAM86B2P0C5J1 330 aa11.64□□□□□ -0.55
ZNF540-208ENST00000589857 CCDC172P0C7W6 258 aa11.64□□□□□ -0.55
ZNF540-208ENST00000589857 SPATA31C1P0DKV0 1188 aa11.64□□□□□ -0.55
ZNF540-208ENST00000589857 BCRP11274 1271 aa11.64□□□□□ -0.55
ZNF540-208ENST00000589857 XRCC5P13010 732 aaKnown RBP11.64□□□□□ -0.55
ZNF540-208ENST00000589857 NR2F2P24468 414 aa11.64□□□□□ -0.55
ZNF540-208ENST00000589857 GJA5P36382 358 aa11.64□□□□□ -0.55
ZNF540-208ENST00000589857 EIF4A3P38919 411 aaKnown RBP11.64□□□□□ -0.55
ZNF540-208ENST00000589857 CAP2P40123 477 aa11.64□□□□□ -0.55
ZNF540-208ENST00000589857 STAT3P40763 770 aa11.64□□□□□ -0.55
ZNF540-208ENST00000589857 MAP3K10Q02779 954 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms