RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, human

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN2-208	ENST00000589216	PPP1R16B	Q96T49	567 aa		11.13	□□□□□ -0.63
PTPN2-208	ENST00000589216	SLC9A7	Q96T83	725 aa		11.13	□□□□□ -0.63
PTPN2-208	ENST00000589216	SH2D3A	Q9BRG2	576 aa		11.13	□□□□□ -0.63
PTPN2-208	ENST00000589216	SEMA6B	Q9H3T3	888 aa		11.13	□□□□□ -0.63
PTPN2-208	ENST00000589216	AGO3	Q9H9G7	860 aa	Known RBP	11.13	□□□□□ -0.63
PTPN2-208	ENST00000589216	BRMS1	Q9HCU9	246 aa		11.13	□□□□□ -0.63
PTPN2-208	ENST00000589216	PCDHA2	Q9Y5H9	948 aa		11.13	□□□□□ -0.63
PTPN2-208	ENST00000589216	TMEM265	A0A087WTH1	108 aa		11.12	□□□□□ -0.63
PTPN2-208	ENST00000589216	SMIM35	A0A1B0GVV1	85 aa		11.12	□□□□□ -0.63
PTPN2-208	ENST00000589216	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	11.12	□□□□□ -0.63
PTPN2-208	ENST00000589216	PARN	O95453	639 aa	Known RBP	11.12	□□□□□ -0.63
PTPN2-208	ENST00000589216	SFN	P31947	248 aa		11.12	□□□□□ -0.63
PTPN2-208	ENST00000589216	KCNJ6	P48051	423 aa		11.12	□□□□□ -0.63
PTPN2-208	ENST00000589216	CLCN3	P51790	818 aa		11.12	□□□□□ -0.63
PTPN2-208	ENST00000589216	HMGN5	P82970	282 aa	Known RBP	11.12	□□□□□ -0.63
PTPN2-208	ENST00000589216	PPP2R5C	Q13362	524 aa		11.12	□□□□□ -0.63
PTPN2-208	ENST00000589216	NBR1	Q14596	966 aa		11.12	□□□□□ -0.63
PTPN2-208	ENST00000589216	RAB30	Q15771	203 aa		11.12	□□□□□ -0.63
PTPN2-208	ENST00000589216	ZNF484	Q5JVG2	852 aa		11.12	□□□□□ -0.63
PTPN2-208	ENST00000589216	FBXO47	Q5MNV8	452 aa		11.12	□□□□□ -0.63
PTPN2-208	ENST00000589216	PLA2G4F	Q68DD2	849 aa		11.12	□□□□□ -0.63
PTPN2-208	ENST00000589216	FAM117B	Q6P1L5	589 aa		11.12	□□□□□ -0.63
PTPN2-208	ENST00000589216	LINC01465	Q8N7H1	131 aa		11.12	□□□□□ -0.63
PTPN2-208	ENST00000589216	FBXO18	Q8NFZ0	1043 aa		11.12	□□□□□ -0.63
PTPN2-208	ENST00000589216	TMEM40	Q8WWA1	233 aa		11.12	□□□□□ -0.63
PTPN2-208	ENST00000589216	BBX	Q8WY36	941 aa	Predicted RBP	11.12	□□□□□ -0.63
PTPN2-208	ENST00000589216	CEP89	Q96ST8	783 aa		11.12	□□□□□ -0.63
PTPN2-208	ENST00000589216	CDX2	Q99626	313 aa	Predicted RBP	11.12	□□□□□ -0.63
PTPN2-208	ENST00000589216	IFIH1	Q9BYX4	1025 aa	Known RBP	11.12	□□□□□ -0.63
PTPN2-208	ENST00000589216	TMEM60	Q9H2L4	133 aa		11.12	□□□□□ -0.63
PTPN2-208	ENST00000589216	ZNF576	Q9H609	170 aa		11.12	□□□□□ -0.63
PTPN2-208	ENST00000589216	CDHR5	Q9HBB8	845 aa		11.12	□□□□□ -0.63
PTPN2-208	ENST00000589216	PCDHA11	Q9Y5I1	949 aa		11.12	□□□□□ -0.63
PTPN2-208	ENST00000589216	TRPV2	Q9Y5S1	764 aa		11.12	□□□□□ -0.63
PTPN2-208	ENST00000589216	PRUNE2	Q8WUY3	3088 aa		11.12	□□□□□ -0.63
PTPN2-208	ENST00000589216	TTC3	P53804	2025 aa		11.11	□□□□□ -0.63
PTPN2-208	ENST00000589216	EPOP	A6NHQ4	379 aa		11.11	□□□□□ -0.63
PTPN2-208	ENST00000589216	NEMF	O60524	1076 aa		11.11	□□□□□ -0.63
PTPN2-208	ENST00000589216	VTN	P04004	478 aa		11.11	□□□□□ -0.63
PTPN2-208	ENST00000589216	ATP2B1	P20020	1258 aa		11.11	□□□□□ -0.63
PTPN2-208	ENST00000589216	CD52	P31358	61 aa		11.11	□□□□□ -0.63
PTPN2-208	ENST00000589216	DRP2	Q13474	957 aa		11.11	□□□□□ -0.63
PTPN2-208	ENST00000589216	TARBP2	Q15633	366 aa	Known RBP	11.11	□□□□□ -0.63
PTPN2-208	ENST00000589216	PPP2R2D	Q66LE6	453 aa		11.11	□□□□□ -0.63
PTPN2-208	ENST00000589216	NCAPH2	Q6IBW4	605 aa		11.11	□□□□□ -0.63
PTPN2-208	ENST00000589216	KIAA0319L	Q8IZA0	1049 aa		11.11	□□□□□ -0.63
PTPN2-208	ENST00000589216	LRRC71	Q8N4P6	559 aa		11.11	□□□□□ -0.63
PTPN2-208	ENST00000589216	RDM1	Q8NG50	284 aa		11.11	□□□□□ -0.63
PTPN2-208	ENST00000589216	SEPT8	Q92599	483 aa		11.11	□□□□□ -0.63
PTPN2-208	ENST00000589216	FAM167A	Q96KS9	214 aa		11.11	□□□□□ -0.63
PTPN2-208	ENST00000589216	PRDM12	Q9H4Q4	367 aa		11.11	□□□□□ -0.63
PTPN2-208	ENST00000589216	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.11	□□□□□ -0.63
PTPN2-208	ENST00000589216	MSRA	Q9UJ68	235 aa		11.11	□□□□□ -0.63
PTPN2-208	ENST00000589216	RALGAPA2	Q2PPJ7	1873 aa		11.1	□□□□□ -0.63
PTPN2-208	ENST00000589216	ABHD14A-ACY1	A0A1B0GW23	586 aa		11.1	□□□□□ -0.63
PTPN2-208	ENST00000589216	POTEM	A6NI47	508 aa		11.1	□□□□□ -0.63
PTPN2-208	ENST00000589216	TBX3	O15119	743 aa		11.1	□□□□□ -0.63
PTPN2-208	ENST00000589216	GJB5	O95377	273 aa		11.1	□□□□□ -0.63
PTPN2-208	ENST00000589216	CYP4A11	Q02928	519 aa		11.1	□□□□□ -0.63
PTPN2-208	ENST00000589216	IKBKE	Q14164	716 aa		11.1	□□□□□ -0.63
PTPN2-208	ENST00000589216	KIZ	Q2M2Z5	673 aa		11.1	□□□□□ -0.63
PTPN2-208	ENST00000589216	TMEM266	Q2M3C6	531 aa		11.1	□□□□□ -0.63
PTPN2-208	ENST00000589216	MTERF2	Q49AM1	385 aa		11.1	□□□□□ -0.63
PTPN2-208	ENST00000589216	TSHZ1	Q6ZSZ6	1077 aa		11.1	□□□□□ -0.63
PTPN2-208	ENST00000589216	ANO5	Q75V66	913 aa		11.1	□□□□□ -0.63
PTPN2-208	ENST00000589216	RSPH3	Q86UC2	560 aa		11.1	□□□□□ -0.63
PTPN2-208	ENST00000589216	NOSTRIN	Q8IVI9	506 aa		11.1	□□□□□ -0.63
PTPN2-208	ENST00000589216	MYOCD	Q8IZQ8	938 aa		11.1	□□□□□ -0.63
PTPN2-208	ENST00000589216	ZNF579	Q8NAF0	562 aa	Known RBP	11.1	□□□□□ -0.63
PTPN2-208	ENST00000589216	FAM184A	Q8NB25	1140 aa		11.1	□□□□□ -0.63
PTPN2-208	ENST00000589216	ZNF668	Q96K58	619 aa	Predicted RBP	11.1	□□□□□ -0.63
PTPN2-208	ENST00000589216	FAM20A	Q96MK3	541 aa		11.1	□□□□□ -0.63
PTPN2-208	ENST00000589216	CERS4	Q9HA82	394 aa		11.1	□□□□□ -0.63
PTPN2-208	ENST00000589216	RGL1	Q9NZL6	768 aa		11.1	□□□□□ -0.63
PTPN2-208	ENST00000589216	GINS2	Q9Y248	185 aa		11.1	□□□□□ -0.63
PTPN2-208	ENST00000589216	STXBP5L	Q9Y2K9	1186 aa		11.1	□□□□□ -0.63
PTPN2-208	ENST00000589216	PRRC2B	Q5JSZ5	2229 aa	Known RBP	11.1	□□□□□ -0.63
PTPN2-208	ENST00000589216	KDM3A	Q9Y4C1	1321 aa		11.09	□□□□□ -0.63
PTPN2-208	ENST00000589216	TLL1	O43897	1013 aa		11.09	□□□□□ -0.63
PTPN2-208	ENST00000589216	MGEA5	O60502	916 aa		11.09	□□□□□ -0.63
PTPN2-208	ENST00000589216	GJB2	P29033	226 aa		11.09	□□□□□ -0.63
PTPN2-208	ENST00000589216	MCM7	P33993	719 aa		11.09	□□□□□ -0.63
PTPN2-208	ENST00000589216	TAP1	Q03518	808 aa		11.09	□□□□□ -0.63
PTPN2-208	ENST00000589216	ADGRE1	Q14246	886 aa		11.09	□□□□□ -0.63
PTPN2-208	ENST00000589216	CTTN	Q14247	550 aa	Known RBP	11.09	□□□□□ -0.63
PTPN2-208	ENST00000589216	SAFB	Q15424	915 aa	Known RBP eCLIP	11.09	□□□□□ -0.63
PTPN2-208	ENST00000589216	CALCRL	Q16602	461 aa		11.09	□□□□□ -0.63
PTPN2-208	ENST00000589216	METTL13	Q8N6R0	699 aa		11.09	□□□□□ -0.63
PTPN2-208	ENST00000589216	PHOSPHO2	Q8TCD6	241 aa		11.09	□□□□□ -0.63
PTPN2-208	ENST00000589216	DYDC2	Q96IM9	177 aa		11.09	□□□□□ -0.63
PTPN2-208	ENST00000589216	MTMR9	Q96QG7	549 aa		11.09	□□□□□ -0.63
PTPN2-208	ENST00000589216	OSMR	Q99650	979 aa		11.09	□□□□□ -0.63
PTPN2-208	ENST00000589216	NAP1L4	Q99733	375 aa	Known RBP	11.09	□□□□□ -0.63
PTPN2-208	ENST00000589216	LXN	Q9BS40	222 aa		11.09	□□□□□ -0.63
PTPN2-208	ENST00000589216	CELF4	Q9BZC1	486 aa	Known RBP	11.09	□□□□□ -0.63
PTPN2-208	ENST00000589216	FOXP1	Q9H334	677 aa	Predicted RBP	11.09	□□□□□ -0.63
PTPN2-208	ENST00000589216	TMX1	Q9H3N1	280 aa		11.09	□□□□□ -0.63
PTPN2-208	ENST00000589216	SLC28A3	Q9HAS3	691 aa		11.09	□□□□□ -0.63
PTPN2-208	ENST00000589216	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.09	□□□□□ -0.63
PTPN2-208	ENST00000589216	NOC2L	Q9Y3T9	749 aa	Known RBP	11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms