RNA–Protein interactions for RNA: ENST00000589201.1

LINC00654-202, long intergenic non-protein coding RNA 654, humanhuman

TSL 3 BASIC

Gene LINC00654, Length 579 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-202ENST00000589201 LPIN1Q14693 890 aa22.34■■□□□ 1.17
LINC00654-202ENST00000589201 TMCO2Q7Z6W1 182 aaPredicted RBP22.34■■□□□ 1.17
LINC00654-202ENST00000589201 NOSTRINQ8IVI9 506 aa22.34■■□□□ 1.17
LINC00654-202ENST00000589201 HERC6Q8IVU3 1022 aa22.34■■□□□ 1.17
LINC00654-202ENST00000589201 IFIH1Q9BYX4 1025 aaKnown RBP22.34■■□□□ 1.17
LINC00654-202ENST00000589201 KIF3AQ9Y496 699 aa22.34■■□□□ 1.17
LINC00654-202ENST00000589201 TMEM265A0A087WTH1 108 aa22.33■■□□□ 1.17
LINC00654-202ENST00000589201 EFCAB14O75071 495 aa22.33■■□□□ 1.17
LINC00654-202ENST00000589201 MCM7P33993 719 aa22.33■■□□□ 1.17
LINC00654-202ENST00000589201 SPIRE1Q08AE8 756 aa22.33■■□□□ 1.17
LINC00654-202ENST00000589201 XKR3Q5GH77 459 aa22.33■■□□□ 1.17
LINC00654-202ENST00000589201 FBXO47Q5MNV8 452 aa22.33■■□□□ 1.17
LINC00654-202ENST00000589201 NCAPH2Q6IBW4 605 aa22.33■■□□□ 1.17
LINC00654-202ENST00000589201 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.33■■□□□ 1.17
LINC00654-202ENST00000589201 METTL13Q8N6R0 699 aa22.33■■□□□ 1.17
LINC00654-202ENST00000589201 GUCD1Q96NT3 240 aa22.33■■□□□ 1.17
LINC00654-202ENST00000589201 MTMR9Q96QG7 549 aa22.33■■□□□ 1.17
LINC00654-202ENST00000589201 CELF4Q9BZC1 486 aaKnown RBP22.33■■□□□ 1.17
LINC00654-202ENST00000589201 TMEM60Q9H2L4 133 aa22.33■■□□□ 1.17
LINC00654-202ENST00000589201 NKX2-4Q9H2Z4 354 aa22.33■■□□□ 1.17
LINC00654-202ENST00000589201 ZNF576Q9H609 170 aa22.33■■□□□ 1.17
LINC00654-202ENST00000589201 PCDHA12Q9UN75 941 aa22.33■■□□□ 1.17
LINC00654-202ENST00000589201 PCDHA11Q9Y5I1 949 aa22.33■■□□□ 1.17
LINC00654-202ENST00000589201 TRPV2Q9Y5S1 764 aa22.33■■□□□ 1.17
LINC00654-202ENST00000589201 SIP14410 1827 aa22.33■■□□□ 1.16
LINC00654-202ENST00000589201 PTPRSQ13332 1948 aa22.32■■□□□ 1.16
LINC00654-202ENST00000589201 TMEM150BA6NC51 233 aa22.32■■□□□ 1.16
LINC00654-202ENST00000589201 M0QZ92 97 aa22.32■■□□□ 1.16
LINC00654-202ENST00000589201 MAGEB2O15479 319 aa22.32■■□□□ 1.16
LINC00654-202ENST00000589201 U2AF2P26368 475 aaKnown RBP eCLIP22.32■■□□□ 1.16
LINC00654-202ENST00000589201 TXKP42681 527 aa22.32■■□□□ 1.16
LINC00654-202ENST00000589201 QARSP47897 775 aaKnown RBP22.32■■□□□ 1.16
LINC00654-202ENST00000589201 PSMC5P62195 406 aa22.32■■□□□ 1.16
LINC00654-202ENST00000589201 MKRN4PQ13434 485 aaPredicted RBP22.32■■□□□ 1.16
LINC00654-202ENST00000589201 EPHA7Q15375 998 aa22.32■■□□□ 1.16
LINC00654-202ENST00000589201 ZNF174Q15697 407 aa22.32■■□□□ 1.16
LINC00654-202ENST00000589201 NIFKQ9BYG3 293 aaKnown RBP22.32■■□□□ 1.16
LINC00654-202ENST00000589201 TTC12Q9H892 705 aaPredicted RBP22.32■■□□□ 1.16
LINC00654-202ENST00000589201 AGO3Q9H9G7 860 aaKnown RBP22.32■■□□□ 1.16
LINC00654-202ENST00000589201 SEPT9Q9UHD8 586 aaPredicted RBP22.32■■□□□ 1.16
LINC00654-202ENST00000589201 SMC3Q9UQE7 1217 aa22.32■■□□□ 1.16
LINC00654-202ENST00000589201 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.32■■□□□ 1.16
LINC00654-202ENST00000589201 CHD9Q3L8U1 2897 aa22.31■■□□□ 1.16
LINC00654-202ENST00000589201 DDX11L8A8MPP1 907 aa22.31■■□□□ 1.16
LINC00654-202ENST00000589201 P4HBP07237 508 aaKnown RBP22.31■■□□□ 1.16
LINC00654-202ENST00000589201 TARBP2Q15633 366 aaKnown RBP22.31■■□□□ 1.16
LINC00654-202ENST00000589201 EFCAB12Q6NXP0 572 aa22.31■■□□□ 1.16
LINC00654-202ENST00000589201 APBB2Q92870 758 aa22.31■■□□□ 1.16
LINC00654-202ENST00000589201 SH2D3AQ9BRG2 576 aa22.31■■□□□ 1.16
LINC00654-202ENST00000589201 CDHR5Q9HBB8 845 aa22.31■■□□□ 1.16
LINC00654-202ENST00000589201 RGL1Q9NZL6 768 aa22.31■■□□□ 1.16
LINC00654-202ENST00000589201 WRAP73Q9P2S5 460 aaPredicted RBP22.31■■□□□ 1.16
LINC00654-202ENST00000589201 CLCN3P51790 818 aa22.3■■□□□ 1.16
LINC00654-202ENST00000589201 GRIN2CQ14957 1233 aa22.3■■□□□ 1.16
LINC00654-202ENST00000589201 MTERF2Q49AM1 385 aa22.3■■□□□ 1.16
LINC00654-202ENST00000589201 TTC38Q5R3I4 469 aa22.3■■□□□ 1.16
LINC00654-202ENST00000589201 TSHZ1Q6ZSZ6 1077 aa22.3■■□□□ 1.16
LINC00654-202ENST00000589201 ANO5Q75V66 913 aa22.3■■□□□ 1.16
LINC00654-202ENST00000589201 LRRC71Q8N4P6 559 aa22.3■■□□□ 1.16
LINC00654-202ENST00000589201 CDX2Q99626 313 aaPredicted RBP22.3■■□□□ 1.16
LINC00654-202ENST00000589201 SLC28A3Q9HAS3 691 aa22.3■■□□□ 1.16
LINC00654-202ENST00000589201 GINS2Q9Y248 185 aa22.3■■□□□ 1.16
LINC00654-202ENST00000589201 KDM3AQ9Y4C1 1321 aa22.3■■□□□ 1.16
LINC00654-202ENST00000589201 MICAL3Q7RTP6 2002 aa22.3■■□□□ 1.16
LINC00654-202ENST00000589201 LOXHD1Q8IVV2 1947 aa22.29■■□□□ 1.16
LINC00654-202ENST00000589201 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.29■■□□□ 1.16
LINC00654-202ENST00000589201 VTNP04004 478 aa22.29■■□□□ 1.16
LINC00654-202ENST00000589201 CD52P31358 61 aa22.29■■□□□ 1.16
LINC00654-202ENST00000589201 TBC1D8BQ0IIM8 1120 aa22.29■■□□□ 1.16
LINC00654-202ENST00000589201 CUL4AQ13619 759 aa22.29■■□□□ 1.16
LINC00654-202ENST00000589201 LINC01465Q8N7H1 131 aa22.29■■□□□ 1.16
LINC00654-202ENST00000589201 DYDC2Q96IM9 177 aa22.29■■□□□ 1.16
LINC00654-202ENST00000589201 CEP89Q96ST8 783 aa22.29■■□□□ 1.16
LINC00654-202ENST00000589201 ZBED2Q9BTP6 218 aa22.29■■□□□ 1.16
LINC00654-202ENST00000589201 SUGCTQ9HAC7 445 aa22.29■■□□□ 1.16
LINC00654-202ENST00000589201 SQORQ9Y6N5 450 aa22.29■■□□□ 1.16
LINC00654-202ENST00000589201 COL6A3P12111 3177 aa22.29■■□□□ 1.16
LINC00654-202ENST00000589201 TLL1O43897 1013 aa22.28■■□□□ 1.16
LINC00654-202ENST00000589201 DKC1O60832 514 aaKnown RBP eCLIP22.28■■□□□ 1.16
LINC00654-202ENST00000589201 SLITRK3O94933 977 aa22.28■■□□□ 1.16
LINC00654-202ENST00000589201 GJB5O95377 273 aa22.28■■□□□ 1.16
LINC00654-202ENST00000589201 AMHP03971 560 aa22.28■■□□□ 1.16
LINC00654-202ENST00000589201 CA3P07451 260 aa22.28■■□□□ 1.16
LINC00654-202ENST00000589201 TMOD1P28289 359 aa22.28■■□□□ 1.16
LINC00654-202ENST00000589201 TRAPPC10P48553 1259 aa22.28■■□□□ 1.16
LINC00654-202ENST00000589201 TOB1P50616 345 aaPredicted RBP22.28■■□□□ 1.16
LINC00654-202ENST00000589201 CYP4A11Q02928 519 aa22.28■■□□□ 1.16
LINC00654-202ENST00000589201 CTTNQ14247 550 aaKnown RBP22.28■■□□□ 1.16
LINC00654-202ENST00000589201 NBR1Q14596 966 aa22.28■■□□□ 1.16
LINC00654-202ENST00000589201 PLA2G4FQ68DD2 849 aa22.28■■□□□ 1.16
LINC00654-202ENST00000589201 MCTP1Q6DN14 999 aa22.28■■□□□ 1.16
LINC00654-202ENST00000589201 FAM117BQ6P1L5 589 aa22.28■■□□□ 1.16
LINC00654-202ENST00000589201 MYOCDQ8IZQ8 938 aa22.28■■□□□ 1.16
LINC00654-202ENST00000589201 USP38Q8NB14 1042 aa22.28■■□□□ 1.16
LINC00654-202ENST00000589201 PPP1R16BQ96T49 567 aa22.28■■□□□ 1.16
LINC00654-202ENST00000589201 EIF2AK1Q9BQI3 630 aaKnown RBP22.28■■□□□ 1.16
LINC00654-202ENST00000589201 LXNQ9BS40 222 aa22.28■■□□□ 1.16
LINC00654-202ENST00000589201 NOL7Q9UMY1 257 aaKnown RBP22.28■■□□□ 1.16
LINC00654-202ENST00000589201 H3BQV1 296 aa22.27■■□□□ 1.16
LINC00654-202ENST00000589201 ORC2Q13416 577 aaPredicted RBP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms