RNA–Protein interactions for RNA: ENST00000589161.1

CIRBP-221, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-221ENST00000589161 ZNF862O60290 1169 aa21.65■■□□□ 1.06
CIRBP-221ENST00000589161 MARCH6O60337 910 aa21.65■■□□□ 1.06
CIRBP-221ENST00000589161 IGFBP4P22692 258 aa21.65■■□□□ 1.06
CIRBP-221ENST00000589161 PRKCEQ02156 737 aa21.65■■□□□ 1.06
CIRBP-221ENST00000589161 ADGRE1Q14246 886 aa21.65■■□□□ 1.06
CIRBP-221ENST00000589161 RABEP1Q15276 862 aa21.65■■□□□ 1.06
CIRBP-221ENST00000589161 EARS2Q5JPH6 523 aaKnown RBP21.65■■□□□ 1.06
CIRBP-221ENST00000589161 KRT40Q6A162 431 aa21.65■■□□□ 1.06
CIRBP-221ENST00000589161 FAM43BQ6ZT52 329 aaPredicted RBP21.65■■□□□ 1.06
CIRBP-221ENST00000589161 METTL13Q8N6R0 699 aa21.65■■□□□ 1.06
CIRBP-221ENST00000589161 TNFRSF25Q93038 417 aa21.65■■□□□ 1.06
CIRBP-221ENST00000589161 LCHNA4D1U4 455 aa21.64■■□□□ 1.05
CIRBP-221ENST00000589161 BTBD18B2RXH4 712 aa21.64■■□□□ 1.05
CIRBP-221ENST00000589161 RBAK-RBAKDNI3L0D1 243 aa21.64■■□□□ 1.05
CIRBP-221ENST00000589161 BAG4O95429 457 aaKnown RBP21.64■■□□□ 1.05
CIRBP-221ENST00000589161 TMOD1P28289 359 aa21.64■■□□□ 1.05
CIRBP-221ENST00000589161 CD52P31358 61 aa21.64■■□□□ 1.05
CIRBP-221ENST00000589161 HTRA4P83105 476 aaPredicted RBP21.64■■□□□ 1.05
CIRBP-221ENST00000589161 PPP2R5CQ13362 524 aa21.64■■□□□ 1.05
CIRBP-221ENST00000589161 SAFBQ15424 915 aaKnown RBP eCLIP21.64■■□□□ 1.05
CIRBP-221ENST00000589161 DIS3L2Q8IYB7 885 aaKnown RBP21.64■■□□□ 1.05
CIRBP-221ENST00000589161 ARNTL2Q8WYA1 636 aa21.64■■□□□ 1.05
CIRBP-221ENST00000589161 FTHL17Q9BXU8 183 aa21.64■■□□□ 1.05
CIRBP-221ENST00000589161 AGO3Q9H9G7 860 aaKnown RBP21.64■■□□□ 1.05
CIRBP-221ENST00000589161 CERS4Q9HA82 394 aa21.64■■□□□ 1.05
CIRBP-221ENST00000589161 CDH23Q9H251 3354 aa21.63■■□□□ 1.05
CIRBP-221ENST00000589161 ENPP3O14638 875 aa21.63■■□□□ 1.05
CIRBP-221ENST00000589161 ARHGEF15O94989 841 aa21.63■■□□□ 1.05
CIRBP-221ENST00000589161 UPP2O95045 317 aa21.63■■□□□ 1.05
CIRBP-221ENST00000589161 FOSBP53539 338 aa21.63■■□□□ 1.05
CIRBP-221ENST00000589161 HMGN5P82970 282 aaKnown RBP21.63■■□□□ 1.05
CIRBP-221ENST00000589161 PAK2Q13177 524 aa21.63■■□□□ 1.05
CIRBP-221ENST00000589161 UGCGQ16739 394 aa21.63■■□□□ 1.05
CIRBP-221ENST00000589161 XKR3Q5GH77 459 aa21.63■■□□□ 1.05
CIRBP-221ENST00000589161 SLFN12Q8IYM2 578 aa21.63■■□□□ 1.05
CIRBP-221ENST00000589161 ZNF710Q8N1W2 664 aa21.63■■□□□ 1.05
CIRBP-221ENST00000589161 YME1L1Q96TA2 773 aa21.63■■□□□ 1.05
CIRBP-221ENST00000589161 PADI3Q9ULW8 664 aa21.63■■□□□ 1.05
CIRBP-221ENST00000589161 LINC01553A4QN01 128 aa21.62■■□□□ 1.05
CIRBP-221ENST00000589161 FAM205CA6NFA0 338 aa21.62■■□□□ 1.05
CIRBP-221ENST00000589161 ODR4Q5SWX8 454 aa21.62■■□□□ 1.05
CIRBP-221ENST00000589161 EFCAB12Q6NXP0 572 aa21.62■■□□□ 1.05
CIRBP-221ENST00000589161 HAS1Q92839 578 aa21.62■■□□□ 1.05
CIRBP-221ENST00000589161 C8orf76Q96K31 380 aa21.62■■□□□ 1.05
CIRBP-221ENST00000589161 TGS1Q96RS0 853 aaKnown RBP21.62■■□□□ 1.05
CIRBP-221ENST00000589161 NIFKQ9BYG3 293 aaKnown RBP21.62■■□□□ 1.05
CIRBP-221ENST00000589161 VAV3Q9UKW4 847 aa21.62■■□□□ 1.05
CIRBP-221ENST00000589161 GINS2Q9Y248 185 aa21.62■■□□□ 1.05
CIRBP-221ENST00000589161 CHD9Q3L8U1 2897 aa21.62■■□□□ 1.05
CIRBP-221ENST00000589161 ST18O60284 1047 aa21.61■■□□□ 1.05
CIRBP-221ENST00000589161 DKC1O60832 514 aaKnown RBP eCLIP21.61■■□□□ 1.05
CIRBP-221ENST00000589161 CRYBB1P53674 252 aaPredicted RBP21.61■■□□□ 1.05
CIRBP-221ENST00000589161 ERVK-21P61565 698 aa21.61■■□□□ 1.05
CIRBP-221ENST00000589161 PSMC5P62195 406 aa21.61■■□□□ 1.05
CIRBP-221ENST00000589161 POTEDQ86YR6 584 aa21.61■■□□□ 1.05
CIRBP-221ENST00000589161 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.61■■□□□ 1.05
CIRBP-221ENST00000589161 SP7Q8TDD2 431 aaPredicted RBP21.61■■□□□ 1.05
CIRBP-221ENST00000589161 MAP7D2Q96T17 732 aa21.61■■□□□ 1.05
CIRBP-221ENST00000589161 MYH9P35579 1960 aaKnown RBP21.6■■□□□ 1.05
CIRBP-221ENST00000589161 RFXAPO00287 272 aa21.6■■□□□ 1.05
CIRBP-221ENST00000589161 EML1O00423 815 aa21.6■■□□□ 1.05
CIRBP-221ENST00000589161 GTPBP6O43824 516 aaPredicted RBP21.6■■□□□ 1.05
CIRBP-221ENST00000589161 POU3F3P20264 500 aaPredicted RBP21.6■■□□□ 1.05
CIRBP-221ENST00000589161 TBC1D8BQ0IIM8 1120 aa21.6■■□□□ 1.05
CIRBP-221ENST00000589161 TARBP2Q15633 366 aaKnown RBP21.6■■□□□ 1.05
CIRBP-221ENST00000589161 FAM184AQ8NB25 1140 aa21.6■■□□□ 1.05
CIRBP-221ENST00000589161 CDHR5Q9HBB8 845 aa21.6■■□□□ 1.05
CIRBP-221ENST00000589161 SEPT9Q9UHD8 586 aaPredicted RBP21.6■■□□□ 1.05
CIRBP-221ENST00000589161 MICAL3Q7RTP6 2002 aa21.6■■□□□ 1.05
CIRBP-221ENST00000589161 MYO9BQ13459 2157 aa21.6■■□□□ 1.05
CIRBP-221ENST00000589161 PTPRSQ13332 1948 aa21.59■■□□□ 1.05
CIRBP-221ENST00000589161 EPOPA6NHQ4 379 aa21.59■■□□□ 1.05
CIRBP-221ENST00000589161 DDX11L8A8MPP1 907 aa21.59■■□□□ 1.05
CIRBP-221ENST00000589161 GPR182O15218 404 aa21.59■■□□□ 1.05
CIRBP-221ENST00000589161 RPS6KA5O75582 802 aa21.59■■□□□ 1.05
CIRBP-221ENST00000589161 STBD1O95210 358 aa21.59■■□□□ 1.05
CIRBP-221ENST00000589161 VTNP04004 478 aa21.59■■□□□ 1.05
CIRBP-221ENST00000589161 P4HBP07237 508 aaKnown RBP21.59■■□□□ 1.05
CIRBP-221ENST00000589161 QARSP47897 775 aaKnown RBP21.59■■□□□ 1.05
CIRBP-221ENST00000589161 CLCN3P51790 818 aa21.59■■□□□ 1.05
CIRBP-221ENST00000589161 NFX1Q12986 1120 aaKnown RBP21.59■■□□□ 1.05
CIRBP-221ENST00000589161 EPHA7Q15375 998 aa21.59■■□□□ 1.05
CIRBP-221ENST00000589161 KIZQ2M2Z5 673 aa21.59■■□□□ 1.05
CIRBP-221ENST00000589161 LINC01465Q8N7H1 131 aa21.59■■□□□ 1.05
CIRBP-221ENST00000589161 BANK1Q8NDB2 785 aa21.59■■□□□ 1.05
CIRBP-221ENST00000589161 PPM1EQ8WY54 764 aa21.59■■□□□ 1.05
CIRBP-221ENST00000589161 SUGCTQ9HAC7 445 aa21.59■■□□□ 1.05
CIRBP-221ENST00000589161 AKT3Q9Y243 479 aa21.59■■□□□ 1.05
CIRBP-221ENST00000589161 GPR32O75388 356 aa21.58■■□□□ 1.05
CIRBP-221ENST00000589161 GUCY1B3Q02153 619 aa21.58■■□□□ 1.05
CIRBP-221ENST00000589161 CALCRLQ16602 461 aa21.58■■□□□ 1.05
CIRBP-221ENST00000589161 TMEM266Q2M3C6 531 aa21.58■■□□□ 1.05
CIRBP-221ENST00000589161 MTERF2Q49AM1 385 aa21.58■■□□□ 1.05
CIRBP-221ENST00000589161 RTN4RL1Q86UN2 441 aaPredicted RBP21.58■■□□□ 1.05
CIRBP-221ENST00000589161 LRRC71Q8N4P6 559 aa21.58■■□□□ 1.05
CIRBP-221ENST00000589161 FBXO18Q8NFZ0 1043 aa21.58■■□□□ 1.05
CIRBP-221ENST00000589161 SAMD11Q96NU1 681 aa21.58■■□□□ 1.05
CIRBP-221ENST00000589161 TSPYL2Q9H2G4 693 aaPredicted RBP21.58■■□□□ 1.05
CIRBP-221ENST00000589161 NOC2LQ9Y3T9 749 aaKnown RBP21.58■■□□□ 1.05
CIRBP-221ENST00000589161 DNM2P50570 870 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms