RNA–Protein interactions for RNA: ENST00000588905.5

GCDH-208, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-208ENST00000588905 DEFB103AP81534 67 aa17.44■□□□□ 0.38
GCDH-208ENST00000588905 MRPS6P82932 125 aaKnown RBP17.44■□□□□ 0.38
GCDH-208ENST00000588905 IER5Q5VY09 327 aa17.44■□□□□ 0.38
GCDH-208ENST00000588905 NME8Q8N427 588 aa17.44■□□□□ 0.38
GCDH-208ENST00000588905 RDM1Q8NG50 284 aa17.44■□□□□ 0.38
GCDH-208ENST00000588905 HAS1Q92839 578 aa17.44■□□□□ 0.38
GCDH-208ENST00000588905 FAM20AQ96MK3 541 aa17.44■□□□□ 0.38
GCDH-208ENST00000588905 CDY2AQ9Y6F7 541 aa17.44■□□□□ 0.38
GCDH-208ENST00000588905 MICAL3Q7RTP6 2002 aa17.43■□□□□ 0.38
GCDH-208ENST00000588905 CHMP2AO43633 222 aa17.43■□□□□ 0.38
GCDH-208ENST00000588905 TLL1O43897 1013 aa17.43■□□□□ 0.38
GCDH-208ENST00000588905 PPP2R2DQ66LE6 453 aa17.43■□□□□ 0.38
GCDH-208ENST00000588905 MIER3Q7Z3K6 550 aa17.43■□□□□ 0.38
GCDH-208ENST00000588905 APBB2Q92870 758 aa17.43■□□□□ 0.38
GCDH-208ENST00000588905 FAM167AQ96KS9 214 aa17.43■□□□□ 0.38
GCDH-208ENST00000588905 ZBED2Q9BTP6 218 aa17.43■□□□□ 0.38
GCDH-208ENST00000588905 IFIH1Q9BYX4 1025 aaKnown RBP17.43■□□□□ 0.38
GCDH-208ENST00000588905 FOXP1Q9H334 677 aaPredicted RBP17.43■□□□□ 0.38
GCDH-208ENST00000588905 NRBP2Q9NSY0 501 aa17.43■□□□□ 0.38
GCDH-208ENST00000588905 IGSF9BQ9UPX0 1349 aa17.43■□□□□ 0.38
GCDH-208ENST00000588905 ZBTB42B2RXF5 422 aa17.42■□□□□ 0.38
GCDH-208ENST00000588905 TBX3O15119 743 aa17.42■□□□□ 0.38
GCDH-208ENST00000588905 ZNF862O60290 1169 aa17.42■□□□□ 0.38
GCDH-208ENST00000588905 GJB5O95377 273 aa17.42■□□□□ 0.38
GCDH-208ENST00000588905 AMHP03971 560 aa17.42■□□□□ 0.38
GCDH-208ENST00000588905 CA3P07451 260 aa17.42■□□□□ 0.38
GCDH-208ENST00000588905 GHRP10912 638 aa17.42■□□□□ 0.38
GCDH-208ENST00000588905 GJB2P29033 226 aa17.42■□□□□ 0.38
GCDH-208ENST00000588905 MKRN4PQ13434 485 aaPredicted RBP17.42■□□□□ 0.38
GCDH-208ENST00000588905 LPIN1Q14693 890 aa17.42■□□□□ 0.38
GCDH-208ENST00000588905 FBXO47Q5MNV8 452 aa17.42■□□□□ 0.38
GCDH-208ENST00000588905 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.42■□□□□ 0.38
GCDH-208ENST00000588905 TRMT1LQ7Z2T5 733 aaKnown RBP17.42■□□□□ 0.38
GCDH-208ENST00000588905 POTEDQ86YR6 584 aa17.42■□□□□ 0.38
GCDH-208ENST00000588905 VAV3Q9UKW4 847 aa17.42■□□□□ 0.38
GCDH-208ENST00000588905 CEP131Q9UPN4 1083 aa17.42■□□□□ 0.38
GCDH-208ENST00000588905 SIP14410 1827 aa17.42■□□□□ 0.38
GCDH-208ENST00000588905 BRWD1Q9NSI6 2320 aa17.42■□□□□ 0.38
GCDH-208ENST00000588905 M0QZ92 97 aa17.41■□□□□ 0.38
GCDH-208ENST00000588905 EML1O00423 815 aa17.41■□□□□ 0.38
GCDH-208ENST00000588905 CUL4AQ13619 759 aa17.41■□□□□ 0.38
GCDH-208ENST00000588905 TMCO2Q7Z6W1 182 aaPredicted RBP17.41■□□□□ 0.38
GCDH-208ENST00000588905 KIAA0319LQ8IZA0 1049 aa17.41■□□□□ 0.38
GCDH-208ENST00000588905 RAD9AQ99638 391 aa17.41■□□□□ 0.38
GCDH-208ENST00000588905 TRPV2Q9Y5S1 764 aa17.41■□□□□ 0.38
GCDH-208ENST00000588905 SQORQ9Y6N5 450 aa17.41■□□□□ 0.38
GCDH-208ENST00000588905 EPOPA6NHQ4 379 aa17.4■□□□□ 0.38
GCDH-208ENST00000588905 MAGEB2O15479 319 aa17.4■□□□□ 0.38
GCDH-208ENST00000588905 MARCH6O60337 910 aa17.4■□□□□ 0.38
GCDH-208ENST00000588905 C22orf31O95567 290 aa17.4■□□□□ 0.38
GCDH-208ENST00000588905 OATP04181 439 aa17.4■□□□□ 0.38
GCDH-208ENST00000588905 ATP2B1P20020 1258 aa17.4■□□□□ 0.38
GCDH-208ENST00000588905 U2AF2P26368 475 aaKnown RBP eCLIP17.4■□□□□ 0.383e-8■□□□□ 10.2
GCDH-208ENST00000588905 PRKCEQ02156 737 aa17.4■□□□□ 0.38
GCDH-208ENST00000588905 TMEM62Q0P6H9 643 aa17.4■□□□□ 0.38
GCDH-208ENST00000588905 PPP2R5CQ13362 524 aa17.4■□□□□ 0.38
GCDH-208ENST00000588905 UGCGQ16739 394 aa17.4■□□□□ 0.38
GCDH-208ENST00000588905 TSHZ1Q6ZSZ6 1077 aa17.4■□□□□ 0.38
GCDH-208ENST00000588905 SPRED2Q7Z698 418 aa17.4■□□□□ 0.38
GCDH-208ENST00000588905 NOSTRINQ8IVI9 506 aa17.4■□□□□ 0.38
GCDH-208ENST00000588905 MYOCDQ8IZQ8 938 aa17.4■□□□□ 0.38
GCDH-208ENST00000588905 PPM1EQ8WY54 764 aa17.4■□□□□ 0.38
GCDH-208ENST00000588905 GAS2L1Q99501 681 aaPredicted RBP17.4■□□□□ 0.38
GCDH-208ENST00000588905 CELF4Q9BZC1 486 aaKnown RBP17.4■□□□□ 0.38
GCDH-208ENST00000588905 SMC3Q9UQE7 1217 aa17.4■□□□□ 0.38
GCDH-208ENST00000588905 KIF3AQ9Y496 699 aa17.4■□□□□ 0.38
GCDH-208ENST00000588905 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.4■□□□□ 0.38
GCDH-208ENST00000588905 BDP1A6H8Y1 2624 aa17.4■□□□□ 0.38
GCDH-208ENST00000588905 KDM3AQ9Y4C1 1321 aa17.4■□□□□ 0.38
GCDH-208ENST00000588905 BAG4O95429 457 aaKnown RBP17.39■□□□□ 0.37
GCDH-208ENST00000588905 FAM117BQ6P1L5 589 aa17.39■□□□□ 0.37
GCDH-208ENST00000588905 MTMR9Q96QG7 549 aa17.39■□□□□ 0.37
GCDH-208ENST00000588905 AGO3Q9H9G7 860 aaKnown RBP17.39■□□□□ 0.37
GCDH-208ENST00000588905 ATG2AQ2TAZ0 1938 aa17.39■□□□□ 0.37
GCDH-208ENST00000588905 XIRP2A4UGR9 3374 aa17.38■□□□□ 0.37
GCDH-208ENST00000588905 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.38■□□□□ 0.37
GCDH-208ENST00000588905 NEMFO60524 1076 aa17.38■□□□□ 0.37
GCDH-208ENST00000588905 STBD1O95210 358 aa17.38■□□□□ 0.37
GCDH-208ENST00000588905 TAP1Q03518 808 aa17.38■□□□□ 0.37
GCDH-208ENST00000588905 SPIRE1Q08AE8 756 aa17.38■□□□□ 0.37
GCDH-208ENST00000588905 GNL2Q13823 731 aaKnown RBP17.38■□□□□ 0.37
GCDH-208ENST00000588905 CALCRLQ16602 461 aa17.38■□□□□ 0.37
GCDH-208ENST00000588905 XKR3Q5GH77 459 aa17.38■□□□□ 0.37
GCDH-208ENST00000588905 TJAP1Q5JTD0 557 aa17.38■□□□□ 0.37
GCDH-208ENST00000588905 SLFN12Q8IYM2 578 aa17.38■□□□□ 0.37
GCDH-208ENST00000588905 METTL13Q8N6R0 699 aa17.38■□□□□ 0.37
GCDH-208ENST00000588905 TOP1MTQ969P6 601 aa17.38■□□□□ 0.37
GCDH-208ENST00000588905 TMEM60Q9H2L4 133 aa17.38■□□□□ 0.37
GCDH-208ENST00000588905 INSL6Q9Y581 213 aa17.38■□□□□ 0.37
GCDH-208ENST00000588905 LCHNA4D1U4 455 aa17.37■□□□□ 0.37
GCDH-208ENST00000588905 RFXAPO00287 272 aa17.37■□□□□ 0.37
GCDH-208ENST00000588905 ENPP3O14638 875 aa17.37■□□□□ 0.37
GCDH-208ENST00000588905 TMOD1P28289 359 aa17.37■□□□□ 0.37
GCDH-208ENST00000588905 CD52P31358 61 aa17.37■□□□□ 0.37
GCDH-208ENST00000588905 MCM7P33993 719 aa17.37■□□□□ 0.37
GCDH-208ENST00000588905 TOB1P50616 345 aaPredicted RBP17.37■□□□□ 0.37
GCDH-208ENST00000588905 PSMC5P62195 406 aa17.37■□□□□ 0.37
GCDH-208ENST00000588905 ZNF174Q15697 407 aa17.37■□□□□ 0.37
GCDH-208ENST00000588905 CCDC85BQ15834 202 aaPredicted RBP17.37■□□□□ 0.37
GCDH-208ENST00000588905 NLRC5Q86WI3 1866 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms