RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 XKR3Q5GH77 459 aa24.71■■□□□ 1.55
ATG4D-209ENST00000588857 KLHL10Q6JEL2 608 aa24.71■■□□□ 1.55
ATG4D-209ENST00000588857 NKRFO15226 690 aaKnown RBP eCLIP24.71■■□□□ 1.55
ATG4D-209ENST00000588857 CD44P16070 742 aaKnown RBP24.71■■□□□ 1.55
ATG4D-209ENST00000588857 HERC4Q5GLZ8 1057 aaPredicted RBP24.71■■□□□ 1.55
ATG4D-209ENST00000588857 ANO5Q75V66 913 aa24.71■■□□□ 1.55
ATG4D-209ENST00000588857 AFAP1L1Q8TED9 768 aa24.71■■□□□ 1.55
ATG4D-209ENST00000588857 SEPT9Q9UHD8 586 aaPredicted RBP24.71■■□□□ 1.55
ATG4D-209ENST00000588857 FRMD3A2A2Y4 597 aa24.7■■□□□ 1.54
ATG4D-209ENST00000588857 IKBKBO14920 756 aa24.7■■□□□ 1.54
ATG4D-209ENST00000588857 SMPD1P17405 629 aa24.7■■□□□ 1.54
ATG4D-209ENST00000588857 GUCY2CP25092 1073 aa24.7■■□□□ 1.54
ATG4D-209ENST00000588857 HOXD10P28358 340 aa24.7■■□□□ 1.54
ATG4D-209ENST00000588857 PPP1R2P41236 205 aa24.7■■□□□ 1.54
ATG4D-209ENST00000588857 PRCPP42785 496 aa24.7■■□□□ 1.54
ATG4D-209ENST00000588857 FLT3LGP49771 235 aa24.7■■□□□ 1.54
ATG4D-209ENST00000588857 PRMT2P55345 433 aa24.7■■□□□ 1.54
ATG4D-209ENST00000588857 TPM4P67936 248 aa24.7■■□□□ 1.54
ATG4D-209ENST00000588857 MYL5Q02045 173 aa24.7■■□□□ 1.54
ATG4D-209ENST00000588857 TNFAIP2Q03169 654 aa24.7■■□□□ 1.54
ATG4D-209ENST00000588857 EHHADHQ08426 723 aa24.7■■□□□ 1.54
ATG4D-209ENST00000588857 STK4Q13043 487 aa24.7■■□□□ 1.54
ATG4D-209ENST00000588857 PRAMEF19Q5SWL8 479 aa24.7■■□□□ 1.54
ATG4D-209ENST00000588857 GJC2Q5T442 439 aaPredicted RBP24.7■■□□□ 1.54
ATG4D-209ENST00000588857 PLA2G4FQ68DD2 849 aa24.7■■□□□ 1.54
ATG4D-209ENST00000588857 ANP32BQ92688 251 aaKnown RBP24.7■■□□□ 1.54
ATG4D-209ENST00000588857 GLG1Q92896 1179 aa24.7■■□□□ 1.54
ATG4D-209ENST00000588857 EMID1Q96A84 441 aaPredicted RBP24.7■■□□□ 1.54
ATG4D-209ENST00000588857 SLC39A2Q9NP94 309 aa24.7■■□□□ 1.54
ATG4D-209ENST00000588857 GABRQQ9UN88 632 aa24.7■■□□□ 1.54
ATG4D-209ENST00000588857 MAPK8IP1Q9UQF2 711 aa24.7■■□□□ 1.54
ATG4D-209ENST00000588857 COL4A3BPQ9Y5P4 624 aa24.7■■□□□ 1.54
ATG4D-209ENST00000588857 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.69■■□□□ 1.54
ATG4D-209ENST00000588857 TMEM150BA6NC51 233 aa24.69■■□□□ 1.54
ATG4D-209ENST00000588857 OATP04181 439 aa24.69■■□□□ 1.54
ATG4D-209ENST00000588857 GAP43P17677 238 aa24.69■■□□□ 1.54
ATG4D-209ENST00000588857 ADSSL1Q8N142 457 aa24.69■■□□□ 1.54
ATG4D-209ENST00000588857 HPS3Q969F9 1004 aa24.69■■□□□ 1.54
ATG4D-209ENST00000588857 CEP170P1Q96L14 293 aa24.69■■□□□ 1.54
ATG4D-209ENST00000588857 PCYT2Q99447 389 aa24.69■■□□□ 1.54
ATG4D-209ENST00000588857 SRRDQ9UH36 339 aa24.69■■□□□ 1.54
ATG4D-209ENST00000588857 ODF2LQ9ULJ1 636 aa24.69■■□□□ 1.54
ATG4D-209ENST00000588857 PTCH2Q9Y6C5 1203 aa24.69■■□□□ 1.54
ATG4D-209ENST00000588857 PSMA7O14818 248 aa24.68■■□□□ 1.54
ATG4D-209ENST00000588857 LGR5O75473 907 aa24.68■■□□□ 1.54
ATG4D-209ENST00000588857 FAM13AO94988 1023 aa24.68■■□□□ 1.54
ATG4D-209ENST00000588857 STBD1O95210 358 aa24.68■■□□□ 1.54
ATG4D-209ENST00000588857 NPEPPSP55786 919 aa24.68■■□□□ 1.54
ATG4D-209ENST00000588857 PRKCZQ05513 592 aa24.68■■□□□ 1.54
ATG4D-209ENST00000588857 FAM26FQ5R3K3 315 aa24.68■■□□□ 1.54
ATG4D-209ENST00000588857 PPTC7Q8NI37 304 aa24.68■■□□□ 1.54
ATG4D-209ENST00000588857 NRBP2Q9NSY0 501 aa24.68■■□□□ 1.54
ATG4D-209ENST00000588857 CTNND2Q9UQB3 1225 aa24.68■■□□□ 1.54
ATG4D-209ENST00000588857 USO1O60763 962 aaKnown RBP24.67■■□□□ 1.54
ATG4D-209ENST00000588857 ZNF865P0CJ78 1059 aaPredicted RBP24.67■■□□□ 1.54
ATG4D-209ENST00000588857 PAK1Q13153 545 aa24.67■■□□□ 1.54
ATG4D-209ENST00000588857 KIAA0895Q8NCT3 520 aa24.67■■□□□ 1.54
ATG4D-209ENST00000588857 SH2D3AQ9BRG2 576 aa24.67■■□□□ 1.54
ATG4D-209ENST00000588857 TIPINQ9BVW5 301 aa24.67■■□□□ 1.54
ATG4D-209ENST00000588857 EMSYQ7Z589 1322 aa24.67■■□□□ 1.54
ATG4D-209ENST00000588857 SYNRGQ9UMZ2 1314 aa24.67■■□□□ 1.54
ATG4D-209ENST00000588857 RSPH10B2B2RC85 870 aa24.67■■□□□ 1.54
ATG4D-209ENST00000588857 IGHA2P01877 340 aa24.67■■□□□ 1.54
ATG4D-209ENST00000588857 RSPH10BP0C881 870 aa24.67■■□□□ 1.54
ATG4D-209ENST00000588857 ATP4AP20648 1035 aa24.67■■□□□ 1.54
ATG4D-209ENST00000588857 COBLL1Q53SF7 1204 aa24.67■■□□□ 1.54
ATG4D-209ENST00000588857 MFSD14CQ5VZR4 134 aa24.67■■□□□ 1.54
ATG4D-209ENST00000588857 PLPPR4Q7Z2D5 763 aa24.67■■□□□ 1.54
ATG4D-209ENST00000588857 TRMT44Q8IYL2 757 aaKnown RBP24.67■■□□□ 1.54
ATG4D-209ENST00000588857 OR6J1Q8NGC5 347 aa24.67■■□□□ 1.54
ATG4D-209ENST00000588857 ENOX1Q8TC92 643 aaKnown RBP24.67■■□□□ 1.54
ATG4D-209ENST00000588857 NELFBQ8WX92 580 aa24.67■■□□□ 1.54
ATG4D-209ENST00000588857 DHTKD1Q96HY7 919 aaPredicted RBP24.67■■□□□ 1.54
ATG4D-209ENST00000588857 FAM167AQ96KS9 214 aa24.67■■□□□ 1.54
ATG4D-209ENST00000588857 SMARCAD1Q9H4L7 1026 aa24.67■■□□□ 1.54
ATG4D-209ENST00000588857 PARVGQ9HBI0 331 aa24.67■■□□□ 1.54
ATG4D-209ENST00000588857 CYP26B1Q9NR63 512 aa24.67■■□□□ 1.54
ATG4D-209ENST00000588857 TBC1D7Q9P0N9 293 aa24.67■■□□□ 1.54
ATG4D-209ENST00000588857 RWDD2AQ9UIY3 292 aa24.67■■□□□ 1.54
ATG4D-209ENST00000588857 HTTP42858 3142 aa24.66■■□□□ 1.54
ATG4D-209ENST00000588857 PTGS1P23219 599 aa24.66■■□□□ 1.54
ATG4D-209ENST00000588857 SLC26A2P50443 739 aa24.66■■□□□ 1.54
ATG4D-209ENST00000588857 SFR1Q86XK3 245 aa24.66■■□□□ 1.54
ATG4D-209ENST00000588857 MYCT1Q8N699 235 aa24.66■■□□□ 1.54
ATG4D-209ENST00000588857 AFG1LQ8WV93 481 aa24.66■■□□□ 1.54
ATG4D-209ENST00000588857 HIP1RO75146 1068 aa24.65■■□□□ 1.54
ATG4D-209ENST00000588857 STX17P56962 302 aa24.65■■□□□ 1.54
ATG4D-209ENST00000588857 PLCB2Q00722 1185 aa24.65■■□□□ 1.54
ATG4D-209ENST00000588857 NCAPHQ15003 741 aa24.65■■□□□ 1.54
ATG4D-209ENST00000588857 MTERF2Q49AM1 385 aa24.65■■□□□ 1.54
ATG4D-209ENST00000588857 ARMC5Q96C12 935 aa24.65■■□□□ 1.54
ATG4D-209ENST00000588857 NIFKQ9BYG3 293 aaKnown RBP24.65■■□□□ 1.54
ATG4D-209ENST00000588857 POLD4Q9HCU8 107 aa24.65■■□□□ 1.54
ATG4D-209ENST00000588857 NRBP1Q9UHY1 535 aa24.65■■□□□ 1.54
ATG4D-209ENST00000588857 FAM184BQ9ULE4 1060 aa24.65■■□□□ 1.54
ATG4D-209ENST00000588857 SFI1A8K8P3 1242 aa24.64■■□□□ 1.54
ATG4D-209ENST00000588857 PPFIA4O75335 1185 aa24.64■■□□□ 1.54
ATG4D-209ENST00000588857 DGAT1O75907 488 aa24.64■■□□□ 1.54
ATG4D-209ENST00000588857 DEKP35659 375 aaKnown RBP24.64■■□□□ 1.54
ATG4D-209ENST00000588857 MAEAQ7L5Y9 396 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms