RNA–Protein interactions for RNA: ENST00000588656.1

CHUK-203, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

TSL 3

Gene CHUK, Length 675 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-203ENST00000588656 TAP1Q03518 808 aa6.57□□□□□ -1.36
CHUK-203ENST00000588656 PDE4BQ07343 736 aa6.57□□□□□ -1.36
CHUK-203ENST00000588656 PDE4CQ08493 712 aa6.57□□□□□ -1.36
CHUK-203ENST00000588656 GRB10Q13322 594 aa6.57□□□□□ -1.36
CHUK-203ENST00000588656 MKL1Q969V6 931 aa6.57□□□□□ -1.36
CHUK-203ENST00000588656 POM121Q96HA1 1249 aa6.57□□□□□ -1.36
CHUK-203ENST00000588656 ZKSCAN3Q9BRR0 538 aa6.57□□□□□ -1.36
CHUK-203ENST00000588656 TSPAN10Q9H1Z9 355 aaPredicted RBP6.57□□□□□ -1.36
CHUK-203ENST00000588656 CD320Q9NPF0 282 aa6.57□□□□□ -1.36
CHUK-203ENST00000588656 PCDHA11Q9Y5I1 949 aa6.57□□□□□ -1.36
CHUK-203ENST00000588656 RALGAPA2Q2PPJ7 1873 aa6.56□□□□□ -1.36
CHUK-203ENST00000588656 ATP9BO43861 1147 aa6.56□□□□□ -1.36
CHUK-203ENST00000588656 CABYRO75952 493 aa6.56□□□□□ -1.36
CHUK-203ENST00000588656 ITGB7P26010 798 aa6.56□□□□□ -1.36
CHUK-203ENST00000588656 CLDN10P78369 228 aa6.56□□□□□ -1.36
CHUK-203ENST00000588656 ZNF200P98182 395 aaPredicted RBP6.56□□□□□ -1.36
CHUK-203ENST00000588656 COL9A3Q14050 684 aaPredicted RBP6.56□□□□□ -1.36
CHUK-203ENST00000588656 PPP2R5BQ15173 497 aa6.56□□□□□ -1.36
CHUK-203ENST00000588656 HIF1AQ16665 826 aa6.56□□□□□ -1.36
CHUK-203ENST00000588656 DUSP28Q4G0W2 176 aa6.56□□□□□ -1.36
CHUK-203ENST00000588656 SH3PXD2AQ5TCZ1 1133 aa6.56□□□□□ -1.36
CHUK-203ENST00000588656 SYDE2Q5VT97 1194 aa6.56□□□□□ -1.36
CHUK-203ENST00000588656 IQSEC1Q6DN90 963 aa6.56□□□□□ -1.36
CHUK-203ENST00000588656 RCSD1Q6JBY9 416 aa6.56□□□□□ -1.36
CHUK-203ENST00000588656 SEPT14Q6ZU15 432 aa6.56□□□□□ -1.36
CHUK-203ENST00000588656 FAM160B2Q86V87 743 aa6.56□□□□□ -1.36
CHUK-203ENST00000588656 HERC6Q8IVU3 1022 aa6.56□□□□□ -1.36
CHUK-203ENST00000588656 RPUSD2Q8IZ73 545 aaKnown RBP6.56□□□□□ -1.36
CHUK-203ENST00000588656 PI4K2BQ8TCG2 481 aa6.56□□□□□ -1.36
CHUK-203ENST00000588656 CHURC1Q8WUH1 139 aa6.56□□□□□ -1.36
CHUK-203ENST00000588656 TBC1D5Q92609 795 aa6.56□□□□□ -1.36
CHUK-203ENST00000588656 ANKS1AQ92625 1134 aa6.56□□□□□ -1.36
CHUK-203ENST00000588656 GPATCH3Q96I76 525 aa6.56□□□□□ -1.36
CHUK-203ENST00000588656 SUSD3Q96L08 255 aa6.56□□□□□ -1.36
CHUK-203ENST00000588656 ALG1Q9BT22 464 aa6.56□□□□□ -1.36
CHUK-203ENST00000588656 LRFN3Q9BTN0 628 aa6.56□□□□□ -1.36
CHUK-203ENST00000588656 PHACTR1Q9C0D0 580 aa6.56□□□□□ -1.36
CHUK-203ENST00000588656 VTA1Q9NP79 307 aa6.56□□□□□ -1.36
CHUK-203ENST00000588656 RCAN3Q9UKA8 241 aa6.56□□□□□ -1.36
CHUK-203ENST00000588656 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.56□□□□□ -1.36
CHUK-203ENST00000588656 LPXNO60711 386 aa6.55□□□□□ -1.36
CHUK-203ENST00000588656 ALBP02768 609 aa6.55□□□□□ -1.36
CHUK-203ENST00000588656 ICAM1P05362 532 aa6.55□□□□□ -1.36
CHUK-203ENST00000588656 CENPBP07199 599 aaPredicted RBP6.55□□□□□ -1.36
CHUK-203ENST00000588656 HMGB1P09429 215 aaKnown RBP6.55□□□□□ -1.36
CHUK-203ENST00000588656 IQCF3P0C7M6 154 aa6.55□□□□□ -1.36
CHUK-203ENST00000588656 ZNF286BP0CG31 522 aa6.55□□□□□ -1.36
CHUK-203ENST00000588656 GNAT2P19087 354 aa6.55□□□□□ -1.36
CHUK-203ENST00000588656 BRD2P25440 801 aaKnown RBP6.55□□□□□ -1.36
CHUK-203ENST00000588656 RPS6P62753 249 aaKnown RBP6.55□□□□□ -1.36
CHUK-203ENST00000588656 NKX3-2P78367 333 aa6.55□□□□□ -1.36
CHUK-203ENST00000588656 PTGISQ16647 500 aa6.55□□□□□ -1.36
CHUK-203ENST00000588656 LY6KQ17RY6 165 aa6.55□□□□□ -1.36
CHUK-203ENST00000588656 RSPO4Q2I0M5 234 aaPredicted RBP6.55□□□□□ -1.36
CHUK-203ENST00000588656 NKAPLQ5M9Q1 402 aa6.55□□□□□ -1.36
CHUK-203ENST00000588656 ZMYM1Q5SVZ6 1142 aa6.55□□□□□ -1.36
CHUK-203ENST00000588656 GDF6Q6KF10 455 aaPredicted RBP6.55□□□□□ -1.36
CHUK-203ENST00000588656 GIMAP6Q6P9H5 292 aa6.55□□□□□ -1.36
CHUK-203ENST00000588656 C20orf204Q6ZNR8 217 aa6.55□□□□□ -1.36
CHUK-203ENST00000588656 RNF207Q6ZRF8 634 aa6.55□□□□□ -1.36
CHUK-203ENST00000588656 EP400NLQ6ZTU2 488 aa6.55□□□□□ -1.36
CHUK-203ENST00000588656 STAG2Q8N3U4 1231 aa6.55□□□□□ -1.36
CHUK-203ENST00000588656 AFG1LQ8WV93 481 aa6.55□□□□□ -1.36
CHUK-203ENST00000588656 CLEC4DQ8WXI8 215 aa6.55□□□□□ -1.36
CHUK-203ENST00000588656 DHX38Q92620 1227 aaKnown RBP6.55□□□□□ -1.36
CHUK-203ENST00000588656 WNT8BQ93098 351 aa6.55□□□□□ -1.36
CHUK-203ENST00000588656 FAM227BQ96M60 508 aa6.55□□□□□ -1.36
CHUK-203ENST00000588656 UIMC1Q96RL1 719 aa6.55□□□□□ -1.36
CHUK-203ENST00000588656 TMEM47Q9BQJ4 181 aa6.55□□□□□ -1.36
CHUK-203ENST00000588656 MTG1Q9BT17 334 aaPredicted RBP6.55□□□□□ -1.36
CHUK-203ENST00000588656 NACAP1Q9BZK3 213 aa6.55□□□□□ -1.36
CHUK-203ENST00000588656 UBA5Q9GZZ9 404 aa6.55□□□□□ -1.36
CHUK-203ENST00000588656 RANBP17Q9H2T7 1088 aaKnown RBP6.55□□□□□ -1.36
CHUK-203ENST00000588656 ZNF287Q9HBT7 754 aa6.55□□□□□ -1.36
CHUK-203ENST00000588656 C11orf16Q9NQ32 467 aa6.55□□□□□ -1.36
CHUK-203ENST00000588656 KIAA1024Q9UPX6 916 aa6.55□□□□□ -1.36
CHUK-203ENST00000588656 PLXNA4Q9HCM2 1894 aa6.55□□□□□ -1.36
CHUK-203ENST00000588656 TRIOO75962 3097 aa6.55□□□□□ -1.36
CHUK-203ENST00000588656 A0A0D9SFI3 127 aa6.54□□□□□ -1.36
CHUK-203ENST00000588656 C9orf172C9J069 976 aa6.54□□□□□ -1.36
CHUK-203ENST00000588656 ERC2O15083 957 aa6.54□□□□□ -1.36
CHUK-203ENST00000588656 LILRB5O75023 590 aa6.54□□□□□ -1.36
CHUK-203ENST00000588656 ZFYP08048 801 aaPredicted RBP6.54□□□□□ -1.36
CHUK-203ENST00000588656 SLC3A2P08195 630 aaKnown RBP6.54□□□□□ -1.36
CHUK-203ENST00000588656 TXNP10599 105 aaKnown RBP6.54□□□□□ -1.36
CHUK-203ENST00000588656 ACTN1P12814 892 aa6.54□□□□□ -1.36
CHUK-203ENST00000588656 NID1P14543 1247 aa6.54□□□□□ -1.36
CHUK-203ENST00000588656 IL9P15248 144 aa6.54□□□□□ -1.36
CHUK-203ENST00000588656 CDK11BP21127 795 aaKnown RBP6.54□□□□□ -1.36
CHUK-203ENST00000588656 KCNJ6P48051 423 aa6.54□□□□□ -1.36
CHUK-203ENST00000588656 CPT1AP50416 773 aa6.54□□□□□ -1.36
CHUK-203ENST00000588656 WDR5P61964 334 aaKnown RBP6.54□□□□□ -1.36
CHUK-203ENST00000588656 GPNMBQ14956 572 aa6.54□□□□□ -1.36
CHUK-203ENST00000588656 TKFCQ3LXA3 575 aa6.54□□□□□ -1.36
CHUK-203ENST00000588656 C8orf86Q6ZUL3 223 aa6.54□□□□□ -1.36
CHUK-203ENST00000588656 ZNF589Q86UQ0 364 aaPredicted RBP6.54□□□□□ -1.36
CHUK-203ENST00000588656 SIX5Q8N196 739 aa6.54□□□□□ -1.36
CHUK-203ENST00000588656 RETREG2Q8NC44 543 aa6.54□□□□□ -1.36
CHUK-203ENST00000588656 HSH2DQ96JZ2 352 aa6.54□□□□□ -1.36
CHUK-203ENST00000588656 CTAGE1Q96RT6 745 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms