RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 DENND3A2RUS2 1198 aa19.1■□□□□ 0.65
LINC01842-201ENST00000588275 IRS1P35568 1242 aa19.1■□□□□ 0.65
LINC01842-201ENST00000588275 SARSP49591 514 aaKnown RBP19.1■□□□□ 0.65
LINC01842-201ENST00000588275 METAP2P50579 478 aaKnown RBP eCLIP19.1■□□□□ 0.65
LINC01842-201ENST00000588275 SMAD4Q13485 552 aaKnown RBP19.1■□□□□ 0.65
LINC01842-201ENST00000588275 CAMK1Q14012 370 aa19.1■□□□□ 0.65
LINC01842-201ENST00000588275 KRT32Q14532 448 aa19.1■□□□□ 0.65
LINC01842-201ENST00000588275 SMAD2Q15796 467 aaKnown RBP19.1■□□□□ 0.65
LINC01842-201ENST00000588275 SWSAP1Q6NVH7 229 aa19.1■□□□□ 0.65
LINC01842-201ENST00000588275 ADGRD2Q7Z7M1 963 aa19.1■□□□□ 0.65
LINC01842-201ENST00000588275 TEX2Q8IWB9 1127 aa19.1■□□□□ 0.65
LINC01842-201ENST00000588275 SPPL3Q8TCT6 385 aa19.1■□□□□ 0.65
LINC01842-201ENST00000588275 POF1BQ8WVV4 589 aa19.1■□□□□ 0.65
LINC01842-201ENST00000588275 CDHR5Q9HBB8 845 aa19.1■□□□□ 0.65
LINC01842-201ENST00000588275 FAM217BQ9NTX9 383 aaPredicted RBP19.1■□□□□ 0.65
LINC01842-201ENST00000588275 CD207Q9UJ71 328 aa19.1■□□□□ 0.65
LINC01842-201ENST00000588275 NOC2LQ9Y3T9 749 aaKnown RBP19.1■□□□□ 0.65
LINC01842-201ENST00000588275 PCDHB7Q9Y5E2 793 aa19.1■□□□□ 0.65
LINC01842-201ENST00000588275 PLXNA4Q9HCM2 1894 aa19.09■□□□□ 0.65
LINC01842-201ENST00000588275 COL1A2P08123 1366 aa19.09■□□□□ 0.65
LINC01842-201ENST00000588275 IGKV6D-21A0A0A0MT36 114 aa19.09■□□□□ 0.65
LINC01842-201ENST00000588275 IPO5O00410 1097 aaKnown RBP19.09■□□□□ 0.65
LINC01842-201ENST00000588275 MGEA5O60502 916 aa19.09■□□□□ 0.65
LINC01842-201ENST00000588275 CPA1P15085 419 aa19.09■□□□□ 0.65
LINC01842-201ENST00000588275 ADD1P35611 737 aaKnown RBP19.09■□□□□ 0.65
LINC01842-201ENST00000588275 APOBRQ0VD83 1088 aa19.09■□□□□ 0.65
LINC01842-201ENST00000588275 PFKFB3Q16875 520 aaPredicted RBP19.09■□□□□ 0.65
LINC01842-201ENST00000588275 NAALADL2Q58DX5 795 aa19.09■□□□□ 0.65
LINC01842-201ENST00000588275 NIPA1Q7RTP0 329 aa19.09■□□□□ 0.65
LINC01842-201ENST00000588275 RBM23Q86U06 439 aaKnown RBP19.09■□□□□ 0.65
LINC01842-201ENST00000588275 CRIPAKQ8N1N5 446 aa19.09■□□□□ 0.65
LINC01842-201ENST00000588275 POP1Q99575 1024 aaKnown RBP19.09■□□□□ 0.65
LINC01842-201ENST00000588275 ZNF577Q9BSK1 485 aa19.09■□□□□ 0.65
LINC01842-201ENST00000588275 ERVK-5Q9HDB9 667 aa19.09■□□□□ 0.65
LINC01842-201ENST00000588275 PCDHGC5Q9Y5F6 944 aa19.09■□□□□ 0.65
LINC01842-201ENST00000588275 C5orf42Q9H799 3197 aa19.09■□□□□ 0.65
LINC01842-201ENST00000588275 C19orf67A6NJJ6 358 aa19.08■□□□□ 0.64
LINC01842-201ENST00000588275 TBKBP1A7MCY6 615 aa19.08■□□□□ 0.64
LINC01842-201ENST00000588275 CDC45O75419 566 aa19.08■□□□□ 0.64
LINC01842-201ENST00000588275 HOXD11P31277 338 aaPredicted RBP19.08■□□□□ 0.64
LINC01842-201ENST00000588275 NRIP1P48552 1158 aa19.08■□□□□ 0.64
LINC01842-201ENST00000588275 ADAM15Q13444 863 aa19.08■□□□□ 0.64
LINC01842-201ENST00000588275 KIZQ2M2Z5 673 aa19.08■□□□□ 0.64
LINC01842-201ENST00000588275 ZNF484Q5JVG2 852 aa19.08■□□□□ 0.64
LINC01842-201ENST00000588275 KIAA0319LQ8IZA0 1049 aa19.08■□□□□ 0.64
LINC01842-201ENST00000588275 METTL13Q8N6R0 699 aa19.08■□□□□ 0.64
LINC01842-201ENST00000588275 MICAL1Q8TDZ2 1067 aa19.08■□□□□ 0.64
LINC01842-201ENST00000588275 TMEM40Q8WWA1 233 aa19.08■□□□□ 0.64
LINC01842-201ENST00000588275 OSMRQ99650 979 aa19.08■□□□□ 0.64
LINC01842-201ENST00000588275 ADAM2Q99965 735 aa19.08■□□□□ 0.64
LINC01842-201ENST00000588275 UPF3BQ9BZI7 483 aaKnown RBP19.08■□□□□ 0.64
LINC01842-201ENST00000588275 C6orf50Q9HD87 102 aa19.08■□□□□ 0.64
LINC01842-201ENST00000588275 ST3GAL5Q9UNP4 418 aa19.08■□□□□ 0.64
LINC01842-201ENST00000588275 MYH9P35579 1960 aaKnown RBP19.08■□□□□ 0.64
LINC01842-201ENST00000588275 FNDC1Q4ZHG4 1894 aaPredicted RBP19.07■□□□□ 0.64
LINC01842-201ENST00000588275 IGLV3-22A0A075B6J6 115 aa19.07■□□□□ 0.64
LINC01842-201ENST00000588275 DHX15O43143 795 aaKnown RBP19.07■□□□□ 0.64
LINC01842-201ENST00000588275 VTNP04004 478 aa19.07■□□□□ 0.64
LINC01842-201ENST00000588275 HMGB1P09429 215 aaKnown RBP19.07■□□□□ 0.64
LINC01842-201ENST00000588275 SETQ01105 290 aaPredicted RBP19.07■□□□□ 0.64
LINC01842-201ENST00000588275 TSGA10IPQ3SY00 556 aa19.07■□□□□ 0.64
LINC01842-201ENST00000588275 ODR4Q5SWX8 454 aa19.07■□□□□ 0.64
LINC01842-201ENST00000588275 Q6ZUG5 572 aa19.07■□□□□ 0.64
LINC01842-201ENST00000588275 REXO1Q8N1G1 1221 aaKnown RBP19.07■□□□□ 0.64
LINC01842-201ENST00000588275 CCDC12Q8WUD4 166 aaPredicted RBP19.07■□□□□ 0.64
LINC01842-201ENST00000588275 MUTYHQ9UIF7 546 aa19.07■□□□□ 0.64
LINC01842-201ENST00000588275 SAMM50Q9Y512 469 aa19.07■□□□□ 0.64
LINC01842-201ENST00000588275 PCDHB12Q9Y5F1 795 aa19.07■□□□□ 0.64
LINC01842-201ENST00000588275 MUC6Q6W4X9 2439 aa19.06■□□□□ 0.64
LINC01842-201ENST00000588275 CCDC196A0A1B0GTZ2 297 aa19.06■□□□□ 0.64
LINC01842-201ENST00000588275 ADAMTS3O15072 1205 aa19.06■□□□□ 0.64
LINC01842-201ENST00000588275 GPR182O15218 404 aa19.06■□□□□ 0.64
LINC01842-201ENST00000588275 ATP4AP20648 1035 aa19.06■□□□□ 0.64
LINC01842-201ENST00000588275 RCAN1P53805 252 aa19.06■□□□□ 0.64
LINC01842-201ENST00000588275 PRR16Q569H4 304 aa19.06■□□□□ 0.64
LINC01842-201ENST00000588275 FAM102BQ5T8I3 360 aa19.06■□□□□ 0.64
LINC01842-201ENST00000588275 CENPQQ7L2Z9 268 aaPredicted RBP19.06■□□□□ 0.64
LINC01842-201ENST00000588275 RASGRP4Q8TDF6 673 aa19.06■□□□□ 0.64
LINC01842-201ENST00000588275 BRF1Q92994 677 aa19.06■□□□□ 0.64
LINC01842-201ENST00000588275 JAKMIP1Q96N16 626 aaKnown RBP19.06■□□□□ 0.64
LINC01842-201ENST00000588275 AAASQ9NRG9 546 aa19.06■□□□□ 0.64
LINC01842-201ENST00000588275 C1orf112Q9NSG2 853 aa19.06■□□□□ 0.64
LINC01842-201ENST00000588275 TBC1D22BQ9NU19 505 aa19.06■□□□□ 0.64
LINC01842-201ENST00000588275 HCSTQ9UBK5 93 aa19.06■□□□□ 0.64
LINC01842-201ENST00000588275 BARX2Q9UMQ3 279 aaPredicted RBP19.06■□□□□ 0.64
LINC01842-201ENST00000588275 ZBTB42B2RXF5 422 aa19.05■□□□□ 0.64
LINC01842-201ENST00000588275 C22orf31O95567 290 aa19.05■□□□□ 0.64
LINC01842-201ENST00000588275 PSAPP07602 524 aa19.05■□□□□ 0.64
LINC01842-201ENST00000588275 CYP3A4P08684 503 aa19.05■□□□□ 0.64
LINC01842-201ENST00000588275 AKAP17AQ02040 695 aaKnown RBP19.05■□□□□ 0.64
LINC01842-201ENST00000588275 ZNF746Q6NUN9 644 aaPredicted RBP19.05■□□□□ 0.64
LINC01842-201ENST00000588275 SLC24A5Q71RS6 500 aa19.05■□□□□ 0.64
LINC01842-201ENST00000588275 FAM228AQ86W67 206 aa19.05■□□□□ 0.64
LINC01842-201ENST00000588275 THNSL1Q8IYQ7 743 aa19.05■□□□□ 0.64
LINC01842-201ENST00000588275 EFHBQ8N7U6 833 aa19.05■□□□□ 0.64
LINC01842-201ENST00000588275 BBXQ8WY36 941 aaPredicted RBP19.05■□□□□ 0.64
LINC01842-201ENST00000588275 PHKBQ93100 1093 aa19.05■□□□□ 0.64
LINC01842-201ENST00000588275 ZMYND12Q9H0C1 365 aa19.05■□□□□ 0.64
LINC01842-201ENST00000588275 RGS18Q9NS28 235 aa19.05■□□□□ 0.64
LINC01842-201ENST00000588275 RNF216Q9NWF9 866 aaPredicted RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms