RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 CDC25AP30304 524 aa16.19■□□□□ 0.18
CCDC43-203ENST00000588210 KRT9P35527 623 aa16.19■□□□□ 0.18
CCDC43-203ENST00000588210 ADCY7P51828 1080 aa16.19■□□□□ 0.18
CCDC43-203ENST00000588210 PDE4DQ08499 809 aa16.19■□□□□ 0.18
CCDC43-203ENST00000588210 WHAMMP3Q1A5X7 153 aa16.19■□□□□ 0.18
CCDC43-203ENST00000588210 LONRF2Q1L5Z9 754 aa16.19■□□□□ 0.18
CCDC43-203ENST00000588210 IRF2BP1Q8IU81 584 aa16.19■□□□□ 0.18
CCDC43-203ENST00000588210 KATNBL1Q9H079 304 aa16.19■□□□□ 0.18
CCDC43-203ENST00000588210 THAP9Q9H5L6 903 aa16.19■□□□□ 0.18
CCDC43-203ENST00000588210 ANKZF1Q9H8Y5 726 aa16.19■□□□□ 0.18
CCDC43-203ENST00000588210 PCDHA6Q9UN73 950 aa16.19■□□□□ 0.18
CCDC43-203ENST00000588210 PCDHA8Q9Y5H6 950 aa16.19■□□□□ 0.18
CCDC43-203ENST00000588210 KLRC4O43908 158 aa16.18■□□□□ 0.18
CCDC43-203ENST00000588210 SGPL1O95470 568 aa16.18■□□□□ 0.18
CCDC43-203ENST00000588210 GNA11P29992 359 aa16.18■□□□□ 0.18
CCDC43-203ENST00000588210 PRPHP41219 470 aa16.18■□□□□ 0.18
CCDC43-203ENST00000588210 GJA8P48165 433 aa16.18■□□□□ 0.18
CCDC43-203ENST00000588210 UBXN1Q04323 297 aa16.18■□□□□ 0.18
CCDC43-203ENST00000588210 SMC1AQ14683 1233 aaKnown RBP16.18■□□□□ 0.18
CCDC43-203ENST00000588210 DEFB118Q96PH6 123 aa16.18■□□□□ 0.18
CCDC43-203ENST00000588210 MAGEF1Q9HAY2 307 aa16.18■□□□□ 0.18
CCDC43-203ENST00000588210 C6orf50Q9HD87 102 aa16.18■□□□□ 0.18
CCDC43-203ENST00000588210 VTA1Q9NP79 307 aa16.18■□□□□ 0.18
CCDC43-203ENST00000588210 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.18■□□□□ 0.18
CCDC43-203ENST00000588210 DDX20Q9UHI6 824 aaKnown RBP16.18■□□□□ 0.18
CCDC43-203ENST00000588210 MCM3APO60318 1980 aa16.18■□□□□ 0.18
CCDC43-203ENST00000588210 RHOBTB3O94955 611 aa16.18■□□□□ 0.18
CCDC43-203ENST00000588210 AKR1A1P14550 325 aa16.18■□□□□ 0.18
CCDC43-203ENST00000588210 EIF2AK2P19525 551 aaKnown RBP16.18■□□□□ 0.18
CCDC43-203ENST00000588210 STIM1Q13586 685 aa16.18■□□□□ 0.18
CCDC43-203ENST00000588210 RASGRP4Q8TDF6 673 aa16.18■□□□□ 0.18
CCDC43-203ENST00000588210 U2AF1L4Q8WU68 220 aaKnown RBP16.18■□□□□ 0.18
CCDC43-203ENST00000588210 PDCD2LQ9BRP1 358 aa16.18■□□□□ 0.18
CCDC43-203ENST00000588210 KBTBD4Q9NVX7 518 aa16.18■□□□□ 0.18
CCDC43-203ENST00000588210 PUF60Q9UHX1 559 aaKnown RBP16.18■□□□□ 0.18
CCDC43-203ENST00000588210 FAM184BQ9ULE4 1060 aa16.18■□□□□ 0.18
CCDC43-203ENST00000588210 TRIM49BA6NDI0 452 aa16.17■□□□□ 0.18
CCDC43-203ENST00000588210 SPDYE3A6NKU9 549 aa16.17■□□□□ 0.18
CCDC43-203ENST00000588210 MAP2K7O14733 419 aa16.17■□□□□ 0.18
CCDC43-203ENST00000588210 NR3C2P08235 984 aa16.17■□□□□ 0.18
CCDC43-203ENST00000588210 PGM5Q15124 567 aa16.17■□□□□ 0.18
CCDC43-203ENST00000588210 STXBP2Q15833 593 aa16.17■□□□□ 0.18
CCDC43-203ENST00000588210 UBE2SQ16763 222 aa16.17■□□□□ 0.18
CCDC43-203ENST00000588210 ZNF507Q8TCN5 953 aa16.17■□□□□ 0.18
CCDC43-203ENST00000588210 NOC3LQ8WTT2 800 aaKnown RBP16.17■□□□□ 0.18
CCDC43-203ENST00000588210 DNAJC7Q99615 494 aa16.17■□□□□ 0.18
CCDC43-203ENST00000588210 TMEM60Q9H2L4 133 aa16.17■□□□□ 0.18
CCDC43-203ENST00000588210 CUEDC2Q9H467 287 aa16.17■□□□□ 0.18
CCDC43-203ENST00000588210 ZSWIM4Q9H7M6 989 aa16.17■□□□□ 0.18
CCDC43-203ENST00000588210 FRMPD4Q14CM0 1322 aa16.17■□□□□ 0.18
CCDC43-203ENST00000588210 POTEFA5A3E0 1075 aa16.17■□□□□ 0.18
CCDC43-203ENST00000588210 FOSP01100 380 aaPredicted RBP16.17■□□□□ 0.18
CCDC43-203ENST00000588210 LHX8Q68G74 356 aa16.17■□□□□ 0.18
CCDC43-203ENST00000588210 MCTP2Q6DN12 878 aa16.17■□□□□ 0.18
CCDC43-203ENST00000588210 EEPD1Q7L9B9 569 aa16.17■□□□□ 0.18
CCDC43-203ENST00000588210 GIMAP8Q8ND71 665 aaPredicted RBP16.17■□□□□ 0.18
CCDC43-203ENST00000588210 CRISPLD2Q9H0B8 497 aa16.17■□□□□ 0.18
CCDC43-203ENST00000588210 MAPK8IP1Q9UQF2 711 aa16.17■□□□□ 0.18
CCDC43-203ENST00000588210 REXO2Q9Y3B8 237 aaKnown RBP16.17■□□□□ 0.18
CCDC43-203ENST00000588210 PP2D1A8MPX8 630 aa16.16■□□□□ 0.18
CCDC43-203ENST00000588210 PSMA7O14818 248 aa16.16■□□□□ 0.18
CCDC43-203ENST00000588210 NDUFA10O95299 355 aa16.16■□□□□ 0.18
CCDC43-203ENST00000588210 UBA7P41226 1012 aa16.16■□□□□ 0.18
CCDC43-203ENST00000588210 CLK2P49760 499 aaKnown RBP16.16■□□□□ 0.18
CCDC43-203ENST00000588210 AMPD2Q01433 879 aa16.16■□□□□ 0.18
CCDC43-203ENST00000588210 AP3B2Q13367 1082 aa16.16■□□□□ 0.18
CCDC43-203ENST00000588210 TAPT1Q6NXT6 567 aa16.16■□□□□ 0.18
CCDC43-203ENST00000588210 FBXO16Q8IX29 292 aaPredicted RBP16.16■□□□□ 0.18
CCDC43-203ENST00000588210 OR8K1Q8NGG5 319 aa16.16■□□□□ 0.18
CCDC43-203ENST00000588210 EPN1Q9Y6I3 576 aaPredicted RBP16.16■□□□□ 0.18
CCDC43-203ENST00000588210 TTC26A0AVF1 554 aa16.15■□□□□ 0.18
CCDC43-203ENST00000588210 POLR3GO15318 223 aaPredicted RBP16.15■□□□□ 0.18
CCDC43-203ENST00000588210 EIF3JO75822 258 aaKnown RBP16.15■□□□□ 0.18
CCDC43-203ENST00000588210 ABL1P00519 1130 aa16.15■□□□□ 0.18
CCDC43-203ENST00000588210 PMS1P54277 932 aaKnown RBP16.15■□□□□ 0.18
CCDC43-203ENST00000588210 SOX10P56693 466 aa16.15■□□□□ 0.18
CCDC43-203ENST00000588210 INF2Q27J81 1249 aa16.15■□□□□ 0.18
CCDC43-203ENST00000588210 BEND6Q5SZJ8 279 aaPredicted RBP16.15■□□□□ 0.18
CCDC43-203ENST00000588210 IQSEC1Q6DN90 963 aa16.15■□□□□ 0.18
CCDC43-203ENST00000588210 TTI2Q6NXR4 508 aa16.15■□□□□ 0.18
CCDC43-203ENST00000588210 VSIG10LQ86VR7 867 aa16.15■□□□□ 0.18
CCDC43-203ENST00000588210 RASSF8Q8NHQ8 419 aa16.15■□□□□ 0.18
CCDC43-203ENST00000588210 DHTKD1Q96HY7 919 aaPredicted RBP16.15■□□□□ 0.18
CCDC43-203ENST00000588210 AK8Q96MA6 479 aa16.15■□□□□ 0.18
CCDC43-203ENST00000588210 PNKPQ96T60 521 aa16.15■□□□□ 0.18
CCDC43-203ENST00000588210 EHMT1Q9H9B1 1298 aa16.15■□□□□ 0.18
CCDC43-203ENST00000588210 CAPN11Q9UMQ6 739 aa16.15■□□□□ 0.18
CCDC43-203ENST00000588210 RBM47A0AV96 593 aaKnown RBP16.15■□□□□ 0.18
CCDC43-203ENST00000588210 CTAGE15A4D2H0 777 aa16.15■□□□□ 0.18
CCDC43-203ENST00000588210 ERLIN1O75477 346 aa16.15■□□□□ 0.18
CCDC43-203ENST00000588210 STAM2O75886 525 aa16.15■□□□□ 0.18
CCDC43-203ENST00000588210 TFRCP02786 760 aaKnown RBP16.15■□□□□ 0.18
CCDC43-203ENST00000588210 TUBBP07437 444 aa16.15■□□□□ 0.18
CCDC43-203ENST00000588210 CTAGE8P0CG41 777 aa16.15■□□□□ 0.18
CCDC43-203ENST00000588210 RARBP10826 455 aa16.15■□□□□ 0.18
CCDC43-203ENST00000588210 CCND2P30279 289 aa16.15■□□□□ 0.18
CCDC43-203ENST00000588210 XRRA1Q6P2D8 792 aa16.15■□□□□ 0.18
CCDC43-203ENST00000588210 ZNF662Q6ZS27 426 aa16.15■□□□□ 0.18
CCDC43-203ENST00000588210 CTAGE6Q86UF2 777 aa16.15■□□□□ 0.18
CCDC43-203ENST00000588210 CTAGE4Q8IX94 777 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms