RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 RHOBTB3O94955 611 aa12.57□□□□□ -0.4
VMP1-207ENST00000588131 LGALS2P05162 132 aa12.57□□□□□ -0.4
VMP1-207ENST00000588131 MMP3P08254 477 aa12.57□□□□□ -0.4
VMP1-207ENST00000588131 RSPH10BP0C881 870 aa12.57□□□□□ -0.4
VMP1-207ENST00000588131 AKR1A1P14550 325 aa12.57□□□□□ -0.4
VMP1-207ENST00000588131 IDEP14735 1019 aa12.57□□□□□ -0.4
VMP1-207ENST00000588131 CD44P16070 742 aaKnown RBP12.57□□□□□ -0.4
VMP1-207ENST00000588131 MARK3P27448 753 aa12.57□□□□□ -0.4
VMP1-207ENST00000588131 CACNB2Q08289 660 aaPredicted RBP12.57□□□□□ -0.4
VMP1-207ENST00000588131 EHHADHQ08426 723 aa12.57□□□□□ -0.4
VMP1-207ENST00000588131 COASYQ13057 564 aa12.57□□□□□ -0.4
VMP1-207ENST00000588131 XKR3Q5GH77 459 aa12.57□□□□□ -0.4
VMP1-207ENST00000588131 PLPPR4Q7Z2D5 763 aa12.57□□□□□ -0.4
VMP1-207ENST00000588131 TLK2Q86UE8 772 aa12.57□□□□□ -0.4
VMP1-207ENST00000588131 SMYD4Q8IYR2 804 aaPredicted RBP12.57□□□□□ -0.4
VMP1-207ENST00000588131 RNF214Q8ND24 703 aa12.57□□□□□ -0.4
VMP1-207ENST00000588131 RAET1EQ8TD07 263 aa12.57□□□□□ -0.4
VMP1-207ENST00000588131 GLG1Q92896 1179 aa12.57□□□□□ -0.4
VMP1-207ENST00000588131 AZI2Q9H6S1 392 aa12.57□□□□□ -0.4
VMP1-207ENST00000588131 BMP2KQ9NSY1 1161 aaPredicted RBP12.57□□□□□ -0.4
VMP1-207ENST00000588131 EXOC1Q9NV70 894 aa12.57□□□□□ -0.4
VMP1-207ENST00000588131 PANK4Q9NVE7 773 aa12.57□□□□□ -0.4
VMP1-207ENST00000588131 RMND1Q9NWS8 449 aa12.57□□□□□ -0.4
VMP1-207ENST00000588131 GDAQ9Y2T3 454 aa12.57□□□□□ -0.4
VMP1-207ENST00000588131 MYH9P35579 1960 aaKnown RBP12.57□□□□□ -0.4
VMP1-207ENST00000588131 FRMD3A2A2Y4 597 aa12.56□□□□□ -0.4
VMP1-207ENST00000588131 USO1O60763 962 aaKnown RBP12.56□□□□□ -0.4
VMP1-207ENST00000588131 HMGCRP04035 888 aa12.56□□□□□ -0.4
VMP1-207ENST00000588131 ZNF286BP0CG31 522 aa12.56□□□□□ -0.4
VMP1-207ENST00000588131 HOXD8P13378 290 aaPredicted RBP12.56□□□□□ -0.4
VMP1-207ENST00000588131 PRKAR2AP13861 404 aaKnown RBP12.56□□□□□ -0.4
VMP1-207ENST00000588131 GUCY2CP25092 1073 aa12.56□□□□□ -0.4
VMP1-207ENST00000588131 CCND3P30281 292 aaPredicted RBP12.56□□□□□ -0.4
VMP1-207ENST00000588131 MAPK7Q13164 816 aa12.56□□□□□ -0.4
VMP1-207ENST00000588131 PLCB4Q15147 1175 aa12.56□□□□□ -0.4
VMP1-207ENST00000588131 MTERF2Q49AM1 385 aa12.56□□□□□ -0.4
VMP1-207ENST00000588131 ZNF658Q5TYW1 1059 aaPredicted RBP12.56□□□□□ -0.4
VMP1-207ENST00000588131 OTUD6AQ7L8S5 288 aa12.56□□□□□ -0.4
VMP1-207ENST00000588131 DAW1Q8N136 415 aa12.56□□□□□ -0.4
VMP1-207ENST00000588131 CEP170P1Q96L14 293 aa12.56□□□□□ -0.4
VMP1-207ENST00000588131 CCDC43Q96MW1 224 aaKnown RBP12.56□□□□□ -0.4
VMP1-207ENST00000588131 CEP89Q96ST8 783 aa12.56□□□□□ -0.4
VMP1-207ENST00000588131 SMARCAD1Q9H4L7 1026 aa12.56□□□□□ -0.4
VMP1-207ENST00000588131 CBX8Q9HC52 389 aa12.56□□□□□ -0.4
VMP1-207ENST00000588131 CYP26B1Q9NR63 512 aa12.56□□□□□ -0.4
VMP1-207ENST00000588131 TRIM17Q9Y577 477 aa12.56□□□□□ -0.4
VMP1-207ENST00000588131 GOLGA6L3A6NEY3 463 aa12.55□□□□□ -0.4
VMP1-207ENST00000588131 A6NJR5 290 aa12.55□□□□□ -0.4
VMP1-207ENST00000588131 PPP1R3GB7ZBB8 358 aa12.55□□□□□ -0.4
VMP1-207ENST00000588131 HIP1RO75146 1068 aa12.55□□□□□ -0.4
VMP1-207ENST00000588131 CNGA1P29973 690 aa12.55□□□□□ -0.4
VMP1-207ENST00000588131 ZNF165P49910 485 aa12.55□□□□□ -0.4
VMP1-207ENST00000588131 STK4Q13043 487 aa12.55□□□□□ -0.4
VMP1-207ENST00000588131 ARHGEF6Q15052 776 aa12.55□□□□□ -0.4
VMP1-207ENST00000588131 MAP3K21Q5TCX8 1036 aa12.55□□□□□ -0.4
VMP1-207ENST00000588131 MAEAQ7L5Y9 396 aa12.55□□□□□ -0.4
VMP1-207ENST00000588131 CCDC65Q8IXS2 484 aa12.55□□□□□ -0.4
VMP1-207ENST00000588131 MLKLQ8NB16 471 aa12.55□□□□□ -0.4
VMP1-207ENST00000588131 KIAA0895Q8NCT3 520 aa12.55□□□□□ -0.4
VMP1-207ENST00000588131 FAM200AQ8TCP9 573 aa12.55□□□□□ -0.4
VMP1-207ENST00000588131 PXYLP1Q8TE99 480 aa12.55□□□□□ -0.4
VMP1-207ENST00000588131 ATP8B4Q8TF62 1192 aa12.55□□□□□ -0.4
VMP1-207ENST00000588131 CCDC47Q96A33 483 aaKnown RBP12.55□□□□□ -0.4
VMP1-207ENST00000588131 C16orf70Q9BSU1 422 aa12.55□□□□□ -0.4
VMP1-207ENST00000588131 NIFKQ9BYG3 293 aaKnown RBP12.55□□□□□ -0.4
VMP1-207ENST00000588131 FGFBP2Q9BYJ0 223 aa12.55□□□□□ -0.4
VMP1-207ENST00000588131 ZHX3Q9H4I2 956 aa12.55□□□□□ -0.4
VMP1-207ENST00000588131 SLC39A2Q9NP94 309 aa12.55□□□□□ -0.4
VMP1-207ENST00000588131 KCND2Q9NZV8 630 aa12.55□□□□□ -0.4
VMP1-207ENST00000588131 Q9Y3F1 56 aa12.55□□□□□ -0.4
VMP1-207ENST00000588131 PTCH2Q9Y6C5 1203 aa12.55□□□□□ -0.4
VMP1-207ENST00000588131 MYADML2A6NDP7 307 aa12.54□□□□□ -0.4
VMP1-207ENST00000588131 SFI1A8K8P3 1242 aa12.54□□□□□ -0.4
VMP1-207ENST00000588131 SEPT4O43236 478 aa12.54□□□□□ -0.4
VMP1-207ENST00000588131 DUSP11O75319 330 aaKnown RBP12.54□□□□□ -0.4
VMP1-207ENST00000588131 PPFIA4O75335 1185 aa12.54□□□□□ -0.4
VMP1-207ENST00000588131 TBCAO75347 108 aaKnown RBP12.54□□□□□ -0.4
VMP1-207ENST00000588131 PRCPP42785 496 aa12.54□□□□□ -0.4
VMP1-207ENST00000588131 SLC26A2P50443 739 aa12.54□□□□□ -0.4
VMP1-207ENST00000588131 PRMT2P55345 433 aa12.54□□□□□ -0.4
VMP1-207ENST00000588131 BEX3Q00994 111 aa12.54□□□□□ -0.4
VMP1-207ENST00000588131 IQCB1Q15051 598 aa12.54□□□□□ -0.4
VMP1-207ENST00000588131 TARBP2Q15633 366 aaKnown RBP12.54□□□□□ -0.4
VMP1-207ENST00000588131 DGKDQ16760 1214 aa12.54□□□□□ -0.4
VMP1-207ENST00000588131 LUZP1Q86V48 1076 aa12.54□□□□□ -0.4
VMP1-207ENST00000588131 SFR1Q86XK3 245 aa12.54□□□□□ -0.4
VMP1-207ENST00000588131 GLIS3Q8NEA6 775 aa12.54□□□□□ -0.4
VMP1-207ENST00000588131 BBXQ8WY36 941 aaPredicted RBP12.54□□□□□ -0.4
VMP1-207ENST00000588131 FAM167AQ96KS9 214 aa12.54□□□□□ -0.4
VMP1-207ENST00000588131 MED15Q96RN5 788 aa12.54□□□□□ -0.4
VMP1-207ENST00000588131 AP5M1Q9H0R1 490 aa12.54□□□□□ -0.4
VMP1-207ENST00000588131 RNPEPQ9H4A4 650 aa12.54□□□□□ -0.4
VMP1-207ENST00000588131 GPRC5CQ9NQ84 441 aa12.54□□□□□ -0.4
VMP1-207ENST00000588131 XPNPEP1Q9NQW7 623 aa12.54□□□□□ -0.4
VMP1-207ENST00000588131 NRBP2Q9NSY0 501 aa12.54□□□□□ -0.4
VMP1-207ENST00000588131 TBC1D7Q9P0N9 293 aa12.54□□□□□ -0.4
VMP1-207ENST00000588131 ODF2LQ9ULJ1 636 aa12.54□□□□□ -0.4
VMP1-207ENST00000588131 MAPK8IP1Q9UQF2 711 aa12.54□□□□□ -0.4
VMP1-207ENST00000588131 PCDHA2Q9Y5H9 948 aa12.54□□□□□ -0.4
VMP1-207ENST00000588131 SYNRGQ9UMZ2 1314 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms