RNA–Protein interactions for RNA: ENST00000587995.5

CACNA2D4-222, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, human

TSL 5 BASIC

Gene CACNA2D4, Length 3,883 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA2D4-222	ENST00000587995	LMNB1	P20700	586 aa		10.63	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	ZKSCAN8	Q15776	578 aa	Predicted RBP	10.63	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	MIIP	Q5JXC2	388 aa		10.63	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	CREG2	Q8IUH2	290 aa		10.63	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	PBK	Q96KB5	322 aa		10.63	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	MMTAG2	Q9BU76	263 aa	Known RBP	10.63	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	TLR10	Q9BXR5	811 aa		10.63	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	VIPAS39	Q9H9C1	493 aa		10.63	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	DDX4	Q9NQI0	724 aa	Known RBP	10.63	□□□□□ -0.71
CACNA2D4-222	ENST00000587995		A6NNZ2	444 aa		10.63	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	IFNB1	P01574	187 aa		10.63	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	FAM153B	P0C7A2	387 aa		10.63	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	EIF2AK2	P19525	551 aa	Known RBP	10.63	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	TMOD1	P28289	359 aa		10.63	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	GALC	P54803	685 aa		10.63	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	AMPD2	Q01433	879 aa		10.63	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	TUBB8	Q3ZCM7	444 aa		10.63	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	FAM153C	Q494X1	144 aa		10.63	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	ANKS1A	Q92625	1134 aa		10.63	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	ZNF653	Q96CK0	615 aa		10.63	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	TBK1	Q9UHD2	729 aa		10.63	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	FAM153A	Q9UHL3	310 aa		10.63	□□□□□ -0.71
CACNA2D4-222	ENST00000587995		A0A1W2PQJ5	194 aa		10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	ZNF263	O14978	683 aa		10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	NDUFB10	O96000	172 aa		10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	E2F5	Q15329	346 aa		10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	GKAP1	Q5VSY0	366 aa	Predicted RBP	10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	USP37	Q86T82	979 aa		10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	SCFD1	Q8WVM8	642 aa		10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	NSRP1	Q9H0G5	558 aa	Known RBP	10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	TAF1D	Q9H5J8	278 aa	Predicted RBP	10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	SYNC	Q9H7C4	482 aa		10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	PSD3	Q9NYI0	1048 aa		10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	MYH2	Q9UKX2	1941 aa		10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	PDE6B	P35913	854 aa		10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	PEX3	P56589	373 aa		10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	DR1	Q01658	176 aa		10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	SF3B2	Q13435	895 aa	Known RBP	10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	UAP1	Q16222	522 aa	Predicted RBP	10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	MEA1	Q16626	185 aa		10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	MMGT1	Q8N4V1	131 aa		10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	TSEN2	Q8NCE0	465 aa	Known RBP	10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	NACC1	Q96RE7	527 aa		10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	TYW1	Q9NV66	732 aa	Known RBP	10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	MRPL11	Q9Y3B7	192 aa	Known RBP	10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	EVI5	O60447	810 aa		10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	CLTA	P09496	248 aa		10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	GLE1	Q53GS7	698 aa	Known RBP	10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	MUM1L1	Q5H9M0	696 aa		10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	KLHDC7A	Q5VTJ3	777 aa		10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	KAZN	Q674X7	775 aa		10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	PPP4R3A	Q6IN85	833 aa		10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	PPP4R3CP	Q6ZMV5	832 aa		10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	TMEM179	Q6ZVK1	233 aa		10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	POMGNT1	Q8WZA1	660 aa		10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	CCDC77	Q9BR77	488 aa		10.62	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	ACSL3	O95573	720 aa		10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	KCNA1	Q09470	495 aa		10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	NAB2	Q15742	525 aa		10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	WDR44	Q5JSH3	913 aa		10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	NLGN1	Q8N2Q7	840 aa		10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	KIFAP3	Q92845	792 aa		10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	FGFBP2	Q9BYJ0	223 aa		10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	ABCB11	O95342	1321 aa		10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	ZBTB39	O15060	712 aa		10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	SSTR3	P32745	418 aa	Predicted RBP	10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	NF2	P35240	595 aa		10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	ADCY8	P40145	1251 aa		10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	MXI1	P50539	228 aa		10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	SHROOM1	Q2M3G4	852 aa	Predicted RBP	10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	CCDC38	Q502W7	563 aa		10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	CC2D2B	Q6DHV5	1058 aa		10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	ZFPM1	Q8IX07	1006 aa		10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	CASKIN2	Q8WXE0	1202 aa		10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	RNPC3	Q96LT9	517 aa	Known RBP	10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	RIOX1	Q9H6W3	641 aa		10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	INTS9	Q9NV88	658 aa	Known RBP	10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	STK38L	Q9Y2H1	464 aa		10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	KIF13A	Q9H1H9	1805 aa		10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	FTL	P02792	175 aa	Predicted RBP	10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	GAP43	P17677	238 aa		10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	USP11	P51784	963 aa		10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	TRADD	Q15628	312 aa		10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	AOC3	Q16853	763 aa		10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	TBC1D31	Q96DN5	1066 aa		10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	ATP6V1G3	Q96LB4	118 aa		10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	10.61	□□□□□ -0.71	1e-11	■■■□□ 16.1
CACNA2D4-222	ENST00000587995	IMPG2	Q9BZV3	1241 aa		10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	IKZF4	Q9H2S9	585 aa		10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	QTRT2	Q9H974	415 aa	Known RBP	10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	SIK3	Q9Y2K2	1263 aa		10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	C5	P01031	1676 aa		10.61	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	ESYT2	A0FGR8	921 aa		10.6	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	HNRNPDL	O14979	420 aa	Known RBP	10.6	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	AKAP3	O75969	853 aa		10.6	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	SYF2	O95926	243 aa	Known RBP	10.6	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	CASP5	P51878	434 aa		10.6	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	AP3B2	Q13367	1082 aa		10.6	□□□□□ -0.71
CACNA2D4-222	ENST00000587995	ECM1	Q16610	540 aa		10.6	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms