RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 AFMP43652 599 aa16.63■□□□□ 0.25
NFIX-208ENST00000587260 DHX8Q14562 1220 aaKnown RBP16.63■□□□□ 0.25
NFIX-208ENST00000587260 LRRC41Q15345 812 aa16.63■□□□□ 0.25
NFIX-208ENST00000587260 GRAMD1CQ8IYS0 662 aa16.63■□□□□ 0.25
NFIX-208ENST00000587260 PPP1R13LQ8WUF5 828 aa16.63■□□□□ 0.25
NFIX-208ENST00000587260 GSDMAQ96QA5 445 aa16.63■□□□□ 0.25
NFIX-208ENST00000587260 ERAP1Q9NZ08 941 aa16.63■□□□□ 0.25
NFIX-208ENST00000587260 ZNF215Q9UL58 517 aaPredicted RBP16.63■□□□□ 0.25
NFIX-208ENST00000587260 TRPC6Q9Y210 931 aa16.63■□□□□ 0.25
NFIX-208ENST00000587260 H3BRB1 525 aa16.62■□□□□ 0.25
NFIX-208ENST00000587260 ZEB2O60315 1214 aa16.62■□□□□ 0.25
NFIX-208ENST00000587260 F2P00734 622 aa16.62■□□□□ 0.25
NFIX-208ENST00000587260 SSBP05455 408 aaKnown RBP eCLIP16.62■□□□□ 0.25
NFIX-208ENST00000587260 PRR29P0C7W0 189 aa16.62■□□□□ 0.25
NFIX-208ENST00000587260 PLA2G4BP0C869 781 aa16.62■□□□□ 0.25
NFIX-208ENST00000587260 CST5P28325 142 aaPredicted RBP16.62■□□□□ 0.25
NFIX-208ENST00000587260 PURAQ00577 322 aaKnown RBP16.62■□□□□ 0.25
NFIX-208ENST00000587260 MCM6Q14566 821 aa16.62■□□□□ 0.25
NFIX-208ENST00000587260 KCNA10Q16322 511 aa16.62■□□□□ 0.25
NFIX-208ENST00000587260 CXCL17Q6UXB2 119 aa16.62■□□□□ 0.25
NFIX-208ENST00000587260 PLPPR4Q7Z2D5 763 aa16.62■□□□□ 0.25
NFIX-208ENST00000587260 SYT2Q8N9I0 419 aaPredicted RBP16.62■□□□□ 0.25
NFIX-208ENST00000587260 KLHDC9Q8NEP7 349 aa16.62■□□□□ 0.25
NFIX-208ENST00000587260 CCDC43Q96MW1 224 aaKnown RBP16.62■□□□□ 0.25
NFIX-208ENST00000587260 TRIM9Q9C026 710 aa16.62■□□□□ 0.25
NFIX-208ENST00000587260 TUT1Q9H6E5 874 aaKnown RBP16.62■□□□□ 0.25
NFIX-208ENST00000587260 ASGR1P07306 291 aa16.61■□□□□ 0.25
NFIX-208ENST00000587260 CCDC192P0DO97 292 aa16.61■□□□□ 0.25
NFIX-208ENST00000587260 SLC12A3P55017 1021 aa16.61■□□□□ 0.25
NFIX-208ENST00000587260 NKX3-2P78367 333 aa16.61■□□□□ 0.25
NFIX-208ENST00000587260 PLCB4Q15147 1175 aa16.61■□□□□ 0.25
NFIX-208ENST00000587260 SASS6Q6UVJ0 657 aa16.61■□□□□ 0.25
NFIX-208ENST00000587260 ANO5Q75V66 913 aa16.61■□□□□ 0.25
NFIX-208ENST00000587260 TRIML1Q8N9V2 468 aa16.61■□□□□ 0.25
NFIX-208ENST00000587260 STAMQ92783 540 aa16.61■□□□□ 0.25
NFIX-208ENST00000587260 KAT2BQ92831 832 aa16.61■□□□□ 0.25
NFIX-208ENST00000587260 ERCC4Q92889 916 aaPredicted RBP16.61■□□□□ 0.25
NFIX-208ENST00000587260 SMARCE1Q969G3 411 aa16.61■□□□□ 0.25
NFIX-208ENST00000587260 BHMT2Q9H2M3 363 aa16.61■□□□□ 0.25
NFIX-208ENST00000587260 BMP2KQ9NSY1 1161 aaPredicted RBP16.61■□□□□ 0.25
NFIX-208ENST00000587260 DBR1Q9UK59 544 aaKnown RBP16.61■□□□□ 0.25
NFIX-208ENST00000587260 SCN10AQ9Y5Y9 1956 aa16.61■□□□□ 0.25
NFIX-208ENST00000587260 STBD1O95210 358 aa16.6■□□□□ 0.25
NFIX-208ENST00000587260 NPEPPSP55786 919 aa16.6■□□□□ 0.25
NFIX-208ENST00000587260 TYRO3Q06418 890 aa16.6■□□□□ 0.25
NFIX-208ENST00000587260 CUL4BQ13620 913 aa16.6■□□□□ 0.25
NFIX-208ENST00000587260 MFSD10Q14728 455 aa16.6■□□□□ 0.25
NFIX-208ENST00000587260 MTERF2Q49AM1 385 aa16.6■□□□□ 0.25
NFIX-208ENST00000587260 XKR3Q5GH77 459 aa16.6■□□□□ 0.25
NFIX-208ENST00000587260 CCSAPQ6IQ19 270 aaPredicted RBP16.6■□□□□ 0.25
NFIX-208ENST00000587260 PCSK9Q8NBP7 692 aaKnown RBP16.6■□□□□ 0.25
NFIX-208ENST00000587260 ATP8B4Q8TF62 1192 aa16.6■□□□□ 0.25
NFIX-208ENST00000587260 U2AF1L4Q8WU68 220 aaKnown RBP16.6■□□□□ 0.25
NFIX-208ENST00000587260 RNPEPQ9H4A4 650 aa16.6■□□□□ 0.25
NFIX-208ENST00000587260 ARHGEF35A5YM69 484 aa16.6■□□□□ 0.25
NFIX-208ENST00000587260 MYMKA6NI61 221 aa16.6■□□□□ 0.25
NFIX-208ENST00000587260 KBTBD13C9JR72 458 aa16.6■□□□□ 0.25
NFIX-208ENST00000587260 RARRES1P49788 294 aa16.6■□□□□ 0.25
NFIX-208ENST00000587260 PSEN2P49810 448 aa16.6■□□□□ 0.25
NFIX-208ENST00000587260 SLC26A2P50443 739 aa16.6■□□□□ 0.25
NFIX-208ENST00000587260 KCNB1Q14721 858 aa16.6■□□□□ 0.25
NFIX-208ENST00000587260 KIAA0753Q2KHM9 967 aa16.6■□□□□ 0.25
NFIX-208ENST00000587260 XKR9Q5GH70 373 aa16.6■□□□□ 0.25
NFIX-208ENST00000587260 BBXQ8WY36 941 aaPredicted RBP16.6■□□□□ 0.25
NFIX-208ENST00000587260 FAM167AQ96KS9 214 aa16.6■□□□□ 0.25
NFIX-208ENST00000587260 MTG1Q9BT17 334 aaPredicted RBP16.6■□□□□ 0.25
NFIX-208ENST00000587260 KATNAL1Q9BW62 490 aa16.6■□□□□ 0.25
NFIX-208ENST00000587260 BLZF1Q9H2G9 400 aa16.6■□□□□ 0.25
NFIX-208ENST00000587260 ANKEF1Q9NU02 776 aa16.6■□□□□ 0.25
NFIX-208ENST00000587260 KCND2Q9NZV8 630 aa16.6■□□□□ 0.25
NFIX-208ENST00000587260 PVALEFA0A1B0GWK0 134 aa16.59■□□□□ 0.25
NFIX-208ENST00000587260 KLRC4O43908 158 aa16.59■□□□□ 0.25
NFIX-208ENST00000587260 KPNA6O60684 536 aa16.59■□□□□ 0.25
NFIX-208ENST00000587260 CYP11B2P19099 503 aa16.59■□□□□ 0.25
NFIX-208ENST00000587260 CASP1P29466 404 aa16.59■□□□□ 0.25
NFIX-208ENST00000587260 ACLYP53396 1101 aa16.59■□□□□ 0.25
NFIX-208ENST00000587260 IGBP1P78318 339 aa16.59■□□□□ 0.25
NFIX-208ENST00000587260 ARRDC4Q8NCT1 418 aa16.59■□□□□ 0.25
NFIX-208ENST00000587260 TRAPPC12Q8WVT3 735 aa16.59■□□□□ 0.25
NFIX-208ENST00000587260 CEP170P1Q96L14 293 aa16.59■□□□□ 0.25
NFIX-208ENST00000587260 TSPY26PQ9H489 355 aa16.59■□□□□ 0.25
NFIX-208ENST00000587260 RMND1Q9NWS8 449 aa16.59■□□□□ 0.25
NFIX-208ENST00000587260 MAN1B1Q9UKM7 699 aa16.59■□□□□ 0.25
NFIX-208ENST00000587260 KAT6AQ92794 2004 aa16.58■□□□□ 0.25
NFIX-208ENST00000587260 USO1O60763 962 aaKnown RBP16.58■□□□□ 0.24
NFIX-208ENST00000587260 SGPL1O95470 568 aa16.58■□□□□ 0.24
NFIX-208ENST00000587260 CAVIN2O95810 425 aa16.58■□□□□ 0.24
NFIX-208ENST00000587260 TFRCP02786 760 aaKnown RBP16.58■□□□□ 0.24
NFIX-208ENST00000587260 RPN1P04843 607 aaKnown RBP16.58■□□□□ 0.24
NFIX-208ENST00000587260 GJB1P08034 283 aa16.58■□□□□ 0.24
NFIX-208ENST00000587260 NLRP12P59046 1061 aa16.58■□□□□ 0.24
NFIX-208ENST00000587260 MORC3Q14149 939 aa16.58■□□□□ 0.24
NFIX-208ENST00000587260 STX1AQ16623 288 aa16.58■□□□□ 0.24
NFIX-208ENST00000587260 ARSHQ5FYA8 562 aa16.58■□□□□ 0.24
NFIX-208ENST00000587260 OTUD6AQ7L8S5 288 aa16.58■□□□□ 0.24
NFIX-208ENST00000587260 GPBP1Q86WP2 473 aa16.58■□□□□ 0.24
NFIX-208ENST00000587260 DDX12PQ92771 950 aa16.58■□□□□ 0.24
NFIX-208ENST00000587260 DNAJC19Q96DA6 116 aa16.58■□□□□ 0.24
NFIX-208ENST00000587260 CYP26B1Q9NR63 512 aa16.58■□□□□ 0.24
NFIX-208ENST00000587260 NRBP2Q9NSY0 501 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms