RNA–Protein interactions for RNA: ENST00000586396.2

SF3A2-202, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS ALT2 TSL 3

Gene SF3A2, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-202ENST00000586396 GFRA3O60609 400 aa17.13■□□□□ 0.33
SF3A2-202ENST00000586396 REC8O95072 547 aa17.13■□□□□ 0.33
SF3A2-202ENST00000586396 INSRRP14616 1297 aa17.13■□□□□ 0.33
SF3A2-202ENST00000586396 ITGB5P18084 799 aa17.13■□□□□ 0.33
SF3A2-202ENST00000586396 RTN4RL1Q86UN2 441 aaPredicted RBP17.13■□□□□ 0.33
SF3A2-202ENST00000586396 MICU3Q86XE3 530 aa17.13■□□□□ 0.33
SF3A2-202ENST00000586396 AZI2Q9H6S1 392 aa17.13■□□□□ 0.33
SF3A2-202ENST00000586396 FAM217BQ9NTX9 383 aaPredicted RBP17.13■□□□□ 0.33
SF3A2-202ENST00000586396 BRPF3Q9ULD4 1205 aa17.13■□□□□ 0.33
SF3A2-202ENST00000586396 PCDHB12Q9Y5F1 795 aa17.13■□□□□ 0.33
SF3A2-202ENST00000586396 PLXNA3P51805 1871 aa17.12■□□□□ 0.33
SF3A2-202ENST00000586396 PER2O15055 1255 aa17.12■□□□□ 0.33
SF3A2-202ENST00000586396 SRGAP2BP0DMP2 458 aa17.12■□□□□ 0.33
SF3A2-202ENST00000586396 ATF7P17544 494 aaPredicted RBP17.12■□□□□ 0.33
SF3A2-202ENST00000586396 VCPP55072 806 aaKnown RBP17.12■□□□□ 0.33
SF3A2-202ENST00000586396 UBE3AQ05086 875 aa17.12■□□□□ 0.33
SF3A2-202ENST00000586396 TNPO1Q92973 898 aaKnown RBP17.12■□□□□ 0.33
SF3A2-202ENST00000586396 ASIC4Q96FT7 647 aa17.12■□□□□ 0.33
SF3A2-202ENST00000586396 LRRC2Q9BYS8 371 aa17.12■□□□□ 0.33
SF3A2-202ENST00000586396 JPH1Q9HDC5 661 aaPredicted RBP17.12■□□□□ 0.33
SF3A2-202ENST00000586396 SNX14Q9Y5W7 946 aa17.12■□□□□ 0.33
SF3A2-202ENST00000586396 SPDYE3A6NKU9 549 aa17.11■□□□□ 0.33
SF3A2-202ENST00000586396 ZBTB43O43298 467 aa17.11■□□□□ 0.33
SF3A2-202ENST00000586396 RXRAP19793 462 aa17.11■□□□□ 0.33
SF3A2-202ENST00000586396 SARSP49591 514 aaKnown RBP17.11■□□□□ 0.33
SF3A2-202ENST00000586396 RBM10P98175 930 aaKnown RBP17.11■□□□□ 0.33
SF3A2-202ENST00000586396 PTPN21Q16825 1174 aa17.11■□□□□ 0.33
SF3A2-202ENST00000586396 TMEM266Q2M3C6 531 aa17.11■□□□□ 0.33
SF3A2-202ENST00000586396 SYNE3Q6ZMZ3 975 aa17.11■□□□□ 0.33
SF3A2-202ENST00000586396 ZBTB33Q86T24 672 aa17.11■□□□□ 0.33
SF3A2-202ENST00000586396 TRAPPC12Q8WVT3 735 aa17.11■□□□□ 0.33
SF3A2-202ENST00000586396 CDCA3Q99618 268 aaPredicted RBP17.11■□□□□ 0.33
SF3A2-202ENST00000586396 CELF4Q9BZC1 486 aaKnown RBP17.11■□□□□ 0.33
SF3A2-202ENST00000586396 IRF2BPLQ9H1B7 796 aa17.11■□□□□ 0.33
SF3A2-202ENST00000586396 PSTPIP2Q9H939 334 aa17.11■□□□□ 0.33
SF3A2-202ENST00000586396 AAASQ9NRG9 546 aa17.11■□□□□ 0.33
SF3A2-202ENST00000586396 DENND3A2RUS2 1198 aa17.1■□□□□ 0.33
SF3A2-202ENST00000586396 MAFGO15525 162 aa17.1■□□□□ 0.33
SF3A2-202ENST00000586396 KRT76Q01546 638 aa17.1■□□□□ 0.33
SF3A2-202ENST00000586396 NFX1Q12986 1120 aaKnown RBP17.1■□□□□ 0.33
SF3A2-202ENST00000586396 UBE2SQ16763 222 aa17.1■□□□□ 0.33
SF3A2-202ENST00000586396 RTN1Q16799 776 aa17.1■□□□□ 0.33
SF3A2-202ENST00000586396 DUSP6Q16828 381 aa17.1■□□□□ 0.33
SF3A2-202ENST00000586396 THNSL1Q8IYQ7 743 aa17.1■□□□□ 0.33
SF3A2-202ENST00000586396 VN1R2Q8NFZ6 395 aa17.1■□□□□ 0.33
SF3A2-202ENST00000586396 SUSD6Q92537 303 aa17.1■□□□□ 0.33
SF3A2-202ENST00000586396 ATOH1Q92858 354 aaPredicted RBP17.1■□□□□ 0.33
SF3A2-202ENST00000586396 PCYT2Q99447 389 aa17.1■□□□□ 0.33
SF3A2-202ENST00000586396 TMX1Q9H3N1 280 aa17.1■□□□□ 0.33
SF3A2-202ENST00000586396 SLC9A2Q9UBY0 812 aa17.1■□□□□ 0.33
SF3A2-202ENST00000586396 GINS2Q9Y248 185 aa17.1■□□□□ 0.33
SF3A2-202ENST00000586396 PCDHB7Q9Y5E2 793 aa17.1■□□□□ 0.33
SF3A2-202ENST00000586396 PCDHA2Q9Y5H9 948 aa17.1■□□□□ 0.33
SF3A2-202ENST00000586396 UBIAD1Q9Y5Z9 338 aa17.1■□□□□ 0.33
SF3A2-202ENST00000586396 KDM3AQ9Y4C1 1321 aa17.1■□□□□ 0.33
SF3A2-202ENST00000586396 EVPLQ92817 2033 aa17.09■□□□□ 0.33
SF3A2-202ENST00000586396 SMIM35A0A1B0GVV1 85 aa17.09■□□□□ 0.33
SF3A2-202ENST00000586396 ESYT2A0FGR8 921 aa17.09■□□□□ 0.33
SF3A2-202ENST00000586396 TBKBP1A7MCY6 615 aa17.09■□□□□ 0.33
SF3A2-202ENST00000586396 FGF18O76093 207 aa17.09■□□□□ 0.33
SF3A2-202ENST00000586396 SP100P23497 879 aaPredicted RBP17.09■□□□□ 0.33
SF3A2-202ENST00000586396 CLK2P49760 499 aaKnown RBP17.09■□□□□ 0.33
SF3A2-202ENST00000586396 PLCB4Q15147 1175 aa17.09■□□□□ 0.33
SF3A2-202ENST00000586396 PLPP4Q5VZY2 271 aa17.09■□□□□ 0.33
SF3A2-202ENST00000586396 WWC2Q6AWC2 1192 aa17.09■□□□□ 0.33
SF3A2-202ENST00000586396 TYW1BQ6NUM6 668 aa17.09■□□□□ 0.33
SF3A2-202ENST00000586396 CMTR1Q8N1G2 835 aaKnown RBP17.09■□□□□ 0.33
SF3A2-202ENST00000586396 ATP8B4Q8TF62 1192 aa17.09■□□□□ 0.33
SF3A2-202ENST00000586396 GLT8D2Q9H1C3 349 aa17.09■□□□□ 0.33
SF3A2-202ENST00000586396 RNF216Q9NWF9 866 aaPredicted RBP17.09■□□□□ 0.33
SF3A2-202ENST00000586396 TMEM260Q9NX78 707 aa17.09■□□□□ 0.33
SF3A2-202ENST00000586396 BARHL2Q9NY43 387 aa17.09■□□□□ 0.33
SF3A2-202ENST00000586396 CCDC196A0A1B0GTZ2 297 aa17.08■□□□□ 0.32
SF3A2-202ENST00000586396 MGEA5O60502 916 aa17.08■□□□□ 0.32
SF3A2-202ENST00000586396 RPS6KB1P23443 525 aa17.08■□□□□ 0.32
SF3A2-202ENST00000586396 CDC27P30260 824 aa17.08■□□□□ 0.32
SF3A2-202ENST00000586396 AVPR2P30518 371 aa17.08■□□□□ 0.32
SF3A2-202ENST00000586396 COLGALT1Q8NBJ5 622 aa17.08■□□□□ 0.32
SF3A2-202ENST00000586396 CRYGNQ8WXF5 182 aa17.08■□□□□ 0.32
SF3A2-202ENST00000586396 SDF4Q9BRK5 362 aa17.08■□□□□ 0.32
SF3A2-202ENST00000586396 TM6SF1Q9BZW5 370 aa17.08■□□□□ 0.32
SF3A2-202ENST00000586396 RIC8AQ9NPQ8 531 aa17.08■□□□□ 0.32
SF3A2-202ENST00000586396 JADE2Q9NQC1 790 aa17.08■□□□□ 0.32
SF3A2-202ENST00000586396 HCSTQ9UBK5 93 aa17.08■□□□□ 0.32
SF3A2-202ENST00000586396 DNAH14Q0VDD8 3507 aa17.08■□□□□ 0.32
SF3A2-202ENST00000586396 FRYLO94915 3013 aa17.08■□□□□ 0.32
SF3A2-202ENST00000586396 KLF18A0A0U1RQI7 1052 aa17.07■□□□□ 0.32
SF3A2-202ENST00000586396 RPS6KA5O75582 802 aa17.07■□□□□ 0.32
SF3A2-202ENST00000586396 FOSP01100 380 aaPredicted RBP17.07■□□□□ 0.32
SF3A2-202ENST00000586396 NEFLP07196 543 aa17.07■□□□□ 0.32
SF3A2-202ENST00000586396 PSMA5P28066 241 aa17.07■□□□□ 0.32
SF3A2-202ENST00000586396 TECP42680 631 aa17.07■□□□□ 0.32
SF3A2-202ENST00000586396 ERVFC1P60507 584 aa17.07■□□□□ 0.32
SF3A2-202ENST00000586396 ACTR2P61160 394 aa17.07■□□□□ 0.32
SF3A2-202ENST00000586396 AP3B2Q13367 1082 aa17.07■□□□□ 0.32
SF3A2-202ENST00000586396 PDE12Q6L8Q7 609 aaKnown RBP17.07■□□□□ 0.32
SF3A2-202ENST00000586396 LLGL2Q6P1M3 1020 aa17.07■□□□□ 0.32
SF3A2-202ENST00000586396 BLOC1S2Q6QNY1 142 aa17.07■□□□□ 0.32
SF3A2-202ENST00000586396 PLPPR4Q7Z2D5 763 aa17.07■□□□□ 0.32
SF3A2-202ENST00000586396 NME8Q8N427 588 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms