RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 CCDC60Q8IWA6 550 aaPredicted RBP13.58□□□□□ -0.24
BRCA1-225ENST00000586385 ANO3Q9BYT9 981 aa13.58□□□□□ -0.24
BRCA1-225ENST00000586385 RIC8AQ9NPQ8 531 aa13.58□□□□□ -0.24
BRCA1-225ENST00000586385 RNF19AQ9NV58 838 aa13.58□□□□□ -0.24
BRCA1-225ENST00000586385 TMEM260Q9NX78 707 aa13.58□□□□□ -0.24
BRCA1-225ENST00000586385 M0QZ92 97 aa13.57□□□□□ -0.24
BRCA1-225ENST00000586385 CALM1P0DP23 149 aa13.57□□□□□ -0.24
BRCA1-225ENST00000586385 CALM2P0DP24 149 aa13.57□□□□□ -0.24
BRCA1-225ENST00000586385 CALM3P0DP25 149 aa13.57□□□□□ -0.24
BRCA1-225ENST00000586385 IBSPP21815 317 aaPredicted RBP13.57□□□□□ -0.24
BRCA1-225ENST00000586385 CLK2P49760 499 aaKnown RBP13.57□□□□□ -0.24
BRCA1-225ENST00000586385 NFX1Q12986 1120 aaKnown RBP13.57□□□□□ -0.24
BRCA1-225ENST00000586385 DSC3Q14574 896 aa13.57□□□□□ -0.24
BRCA1-225ENST00000586385 DUSP6Q16828 381 aa13.57□□□□□ -0.24
BRCA1-225ENST00000586385 CREB3L3Q68CJ9 461 aa13.57□□□□□ -0.24
BRCA1-225ENST00000586385 MICU3Q86XE3 530 aa13.57□□□□□ -0.24
BRCA1-225ENST00000586385 NME8Q8N427 588 aa13.57□□□□□ -0.24
BRCA1-225ENST00000586385 CRYGNQ8WXF5 182 aa13.57□□□□□ -0.24
BRCA1-225ENST00000586385 PPP2R3CQ969Q6 453 aa13.57□□□□□ -0.24
BRCA1-225ENST00000586385 ASIC4Q96FT7 647 aa13.57□□□□□ -0.24
BRCA1-225ENST00000586385 ADAM2Q99965 735 aa13.57□□□□□ -0.24
BRCA1-225ENST00000586385 SDF4Q9BRK5 362 aa13.57□□□□□ -0.24
BRCA1-225ENST00000586385 PHF7Q9BWX1 381 aaPredicted RBP13.57□□□□□ -0.24
BRCA1-225ENST00000586385 S1PR5Q9H228 398 aa13.57□□□□□ -0.24
BRCA1-225ENST00000586385 CWH43Q9H720 699 aa13.57□□□□□ -0.24
BRCA1-225ENST00000586385 TLE6Q9H808 572 aa13.57□□□□□ -0.24
BRCA1-225ENST00000586385 RGS18Q9NS28 235 aa13.57□□□□□ -0.24
BRCA1-225ENST00000586385 FAM217BQ9NTX9 383 aaPredicted RBP13.57□□□□□ -0.24
BRCA1-225ENST00000586385 SLC12A7Q9Y666 1083 aa13.57□□□□□ -0.24
BRCA1-225ENST00000586385 ZDBF2Q9HCK1 2354 aa13.57□□□□□ -0.24
BRCA1-225ENST00000586385 IGLV3-22A0A075B6J6 115 aa13.56□□□□□ -0.24
BRCA1-225ENST00000586385 TBKBP1A7MCY6 615 aa13.56□□□□□ -0.24
BRCA1-225ENST00000586385 FAM86B1E9PN63 330 aa13.56□□□□□ -0.24
BRCA1-225ENST00000586385 DDX39AO00148 427 aaKnown RBP13.56□□□□□ -0.24
BRCA1-225ENST00000586385 FGF18O76093 207 aa13.56□□□□□ -0.24
BRCA1-225ENST00000586385 FAM86B2P0C5J1 330 aa13.56□□□□□ -0.24
BRCA1-225ENST00000586385 FGFR1P11362 822 aa13.56□□□□□ -0.24
BRCA1-225ENST00000586385 SREBF1P36956 1147 aa13.56□□□□□ -0.24
BRCA1-225ENST00000586385 FAM189BP81408 668 aa13.56□□□□□ -0.24
BRCA1-225ENST00000586385 UBE3AQ05086 875 aa13.56□□□□□ -0.24
BRCA1-225ENST00000586385 APOBRQ0VD83 1088 aa13.56□□□□□ -0.24
BRCA1-225ENST00000586385 APOA5Q6Q788 366 aa13.56□□□□□ -0.24
BRCA1-225ENST00000586385 LRRC55Q6ZSA7 311 aa13.56□□□□□ -0.24
BRCA1-225ENST00000586385 FAM228AQ86W67 206 aa13.56□□□□□ -0.24
BRCA1-225ENST00000586385 COLGALT1Q8NBJ5 622 aa13.56□□□□□ -0.24
BRCA1-225ENST00000586385 PBXIP1Q96AQ6 731 aa13.56□□□□□ -0.24
BRCA1-225ENST00000586385 YTHDC1Q96MU7 727 aaKnown RBP13.56□□□□□ -0.24
BRCA1-225ENST00000586385 PPP1R16BQ96T49 567 aa13.56□□□□□ -0.24
BRCA1-225ENST00000586385 TLR9Q9NR96 1032 aa13.56□□□□□ -0.24
BRCA1-225ENST00000586385 TYW1Q9NV66 732 aaKnown RBP13.56□□□□□ -0.24
BRCA1-225ENST00000586385 BRPF3Q9ULD4 1205 aa13.56□□□□□ -0.24
BRCA1-225ENST00000586385 LRFN2Q9ULH4 789 aa13.56□□□□□ -0.24
BRCA1-225ENST00000586385 ST3GAL5Q9UNP4 418 aa13.56□□□□□ -0.24
BRCA1-225ENST00000586385 GINS2Q9Y248 185 aa13.56□□□□□ -0.24
BRCA1-225ENST00000586385 PLXNA4Q9HCM2 1894 aa13.56□□□□□ -0.24
BRCA1-225ENST00000586385 HBP1O60381 514 aa13.55□□□□□ -0.24
BRCA1-225ENST00000586385 GPR32O75388 356 aa13.55□□□□□ -0.24
BRCA1-225ENST00000586385 RPS6KA5O75582 802 aa13.55□□□□□ -0.24
BRCA1-225ENST00000586385 C22orf31O95567 290 aa13.55□□□□□ -0.24
BRCA1-225ENST00000586385 SLC26A2P50443 739 aa13.55□□□□□ -0.24
BRCA1-225ENST00000586385 NAPAP54920 295 aa13.55□□□□□ -0.24
BRCA1-225ENST00000586385 VCPP55072 806 aaKnown RBP13.55□□□□□ -0.24
BRCA1-225ENST00000586385 SYCE2Q6PIF2 218 aa13.55□□□□□ -0.24
BRCA1-225ENST00000586385 RPGRIP1Q96KN7 1286 aa13.55□□□□□ -0.24
BRCA1-225ENST00000586385 TCEANC2Q96MN5 208 aa13.55□□□□□ -0.24
BRCA1-225ENST00000586385 ESYT1Q9BSJ8 1104 aa13.55□□□□□ -0.24
BRCA1-225ENST00000586385 CDH22Q9UJ99 828 aa13.55□□□□□ -0.24
BRCA1-225ENST00000586385 PCDHB7Q9Y5E2 793 aa13.55□□□□□ -0.24
BRCA1-225ENST00000586385 HIDE1A8MVS5 230 aa13.54□□□□□ -0.24
BRCA1-225ENST00000586385 ATF7P17544 494 aaPredicted RBP13.54□□□□□ -0.24
BRCA1-225ENST00000586385 ADCY7P51828 1080 aa13.54□□□□□ -0.24
BRCA1-225ENST00000586385 EXOSC10Q01780 885 aaKnown RBP13.54□□□□□ -0.24
BRCA1-225ENST00000586385 KIZQ2M2Z5 673 aa13.54□□□□□ -0.24
BRCA1-225ENST00000586385 PPP1R18Q6NYC8 613 aa13.54□□□□□ -0.24
BRCA1-225ENST00000586385 TMEM184AQ6ZMB5 413 aa13.54□□□□□ -0.24
BRCA1-225ENST00000586385 SLC24A5Q71RS6 500 aa13.54□□□□□ -0.24
BRCA1-225ENST00000586385 FBXL6Q8N531 539 aa13.54□□□□□ -0.24
BRCA1-225ENST00000586385 LINC01465Q8N7H1 131 aa13.54□□□□□ -0.24
BRCA1-225ENST00000586385 OSMRQ99650 979 aa13.54□□□□□ -0.24
BRCA1-225ENST00000586385 C1orf112Q9NSG2 853 aa13.54□□□□□ -0.24
BRCA1-225ENST00000586385 PCDHB12Q9Y5F1 795 aa13.54□□□□□ -0.24
BRCA1-225ENST00000586385 V9GY48 417 aaPredicted RBP13.54□□□□□ -0.24
BRCA1-225ENST00000586385 CACNA1HO95180 2353 aa13.54□□□□□ -0.24
BRCA1-225ENST00000586385 COL1A2P08123 1366 aa13.54□□□□□ -0.24
BRCA1-225ENST00000586385 LOXHD1Q8IVV2 1947 aa13.53□□□□□ -0.24
BRCA1-225ENST00000586385 DENND3A2RUS2 1198 aa13.53□□□□□ -0.24
BRCA1-225ENST00000586385 SMCO2A6NFE2 343 aa13.53□□□□□ -0.24
BRCA1-225ENST00000586385 BACH1O14867 736 aa13.53□□□□□ -0.24
BRCA1-225ENST00000586385 FOSP01100 380 aaPredicted RBP13.53□□□□□ -0.24
BRCA1-225ENST00000586385 VTNP04004 478 aa13.53□□□□□ -0.24
BRCA1-225ENST00000586385 CDC27P30260 824 aa13.53□□□□□ -0.24
BRCA1-225ENST00000586385 PBX3P40426 434 aa13.53□□□□□ -0.24
BRCA1-225ENST00000586385 SIGLEC14Q08ET2 396 aa13.53□□□□□ -0.24
BRCA1-225ENST00000586385 ZNF484Q5JVG2 852 aa13.53□□□□□ -0.24
BRCA1-225ENST00000586385 SWSAP1Q6NVH7 229 aa13.53□□□□□ -0.24
BRCA1-225ENST00000586385 PDXDC2PQ6P474 469 aa13.53□□□□□ -0.24
BRCA1-225ENST00000586385 NIPA1Q7RTP0 329 aa13.53□□□□□ -0.24
BRCA1-225ENST00000586385 TEX2Q8IWB9 1127 aa13.53□□□□□ -0.24
BRCA1-225ENST00000586385 THNSL1Q8IYQ7 743 aa13.53□□□□□ -0.24
BRCA1-225ENST00000586385 MICAL1Q8TDZ2 1067 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms