RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 RSPH3Q86UC2 560 aa16.28■□□□□ 0.2
SCAMP4-209ENST00000585335 PPP1R13LQ8WUF5 828 aa16.28■□□□□ 0.2
SCAMP4-209ENST00000585335 SLC7A3Q8WY07 619 aa16.28■□□□□ 0.2
SCAMP4-209ENST00000585335 DPF3Q92784 378 aa16.28■□□□□ 0.2
SCAMP4-209ENST00000585335 CHAMP1Q96JM3 812 aa16.28■□□□□ 0.2
SCAMP4-209ENST00000585335 PYM1Q9BRP8 204 aaKnown RBP16.28■□□□□ 0.2
SCAMP4-209ENST00000585335 MMTAG2Q9BU76 263 aaKnown RBP16.28■□□□□ 0.2
SCAMP4-209ENST00000585335 CYP26B1Q9NR63 512 aa16.28■□□□□ 0.2
SCAMP4-209ENST00000585335 TRMT13Q9NUP7 481 aaKnown RBP16.28■□□□□ 0.2
SCAMP4-209ENST00000585335 WRAP73Q9P2S5 460 aaPredicted RBP16.28■□□□□ 0.2
SCAMP4-209ENST00000585335 PRKAG2Q9UGJ0 569 aa16.28■□□□□ 0.2
SCAMP4-209ENST00000585335 DBR1Q9UK59 544 aaKnown RBP16.28■□□□□ 0.2
SCAMP4-209ENST00000585335 KAT6AQ92794 2004 aa16.28■□□□□ 0.2
SCAMP4-209ENST00000585335 B4GALT4O60513 344 aa16.27■□□□□ 0.2
SCAMP4-209ENST00000585335 CLTBP09497 229 aa16.27■□□□□ 0.2
SCAMP4-209ENST00000585335 TMOD1P28289 359 aa16.27■□□□□ 0.2
SCAMP4-209ENST00000585335 POLGP54098 1239 aaPredicted RBP16.27■□□□□ 0.2
SCAMP4-209ENST00000585335 PTK7Q13308 1070 aa16.27■□□□□ 0.2
SCAMP4-209ENST00000585335 KARSQ15046 597 aaKnown RBP16.27■□□□□ 0.2
SCAMP4-209ENST00000585335 ADALQ6DHV7 355 aa16.27■□□□□ 0.2
SCAMP4-209ENST00000585335 CCDC73Q6ZRK6 1079 aa16.27■□□□□ 0.2
SCAMP4-209ENST00000585335 PIGOQ8TEQ8 1089 aa16.27■□□□□ 0.2
SCAMP4-209ENST00000585335 EPSTI1Q96J88 318 aa16.27■□□□□ 0.2
SCAMP4-209ENST00000585335 GBP4Q96PP9 640 aa16.27■□□□□ 0.2
SCAMP4-209ENST00000585335 TRPV6Q9H1D0 765 aa16.27■□□□□ 0.2
SCAMP4-209ENST00000585335 MBLAC1A4D2B0 266 aaPredicted RBP16.26■□□□□ 0.19
SCAMP4-209ENST00000585335 TREHO43280 583 aa16.26■□□□□ 0.19
SCAMP4-209ENST00000585335 GAS2O43903 313 aaKnown RBP16.26■□□□□ 0.19
SCAMP4-209ENST00000585335 STBD1O95210 358 aa16.26■□□□□ 0.19
SCAMP4-209ENST00000585335 EYA4O95677 639 aa16.26■□□□□ 0.19
SCAMP4-209ENST00000585335 CD4P01730 458 aa16.26■□□□□ 0.19
SCAMP4-209ENST00000585335 CYP2C9P11712 490 aa16.26■□□□□ 0.19
SCAMP4-209ENST00000585335 KLRC1P26715 233 aa16.26■□□□□ 0.19
SCAMP4-209ENST00000585335 DNM2P50570 870 aa16.26■□□□□ 0.19
SCAMP4-209ENST00000585335 BFSP2Q13515 415 aa16.26■□□□□ 0.19
SCAMP4-209ENST00000585335 TARBP2Q15633 366 aaKnown RBP16.26■□□□□ 0.19
SCAMP4-209ENST00000585335 TMEM119Q4V9L6 283 aa16.26■□□□□ 0.19
SCAMP4-209ENST00000585335 AXDND1Q5T1B0 1012 aaPredicted RBP16.26■□□□□ 0.19
SCAMP4-209ENST00000585335 RRAGBQ5VZM2 374 aa16.26■□□□□ 0.19
SCAMP4-209ENST00000585335 MTHFD1LQ6UB35 978 aa16.26■□□□□ 0.19
SCAMP4-209ENST00000585335 SERINC5Q86VE9 423 aa16.26■□□□□ 0.19
SCAMP4-209ENST00000585335 TRAPPC12Q8WVT3 735 aa16.26■□□□□ 0.19
SCAMP4-209ENST00000585335 GDPD2Q9HCC8 539 aa16.26■□□□□ 0.19
SCAMP4-209ENST00000585335 TMEM39AQ9NV64 488 aa16.26■□□□□ 0.19
SCAMP4-209ENST00000585335 STK17AQ9UEE5 414 aa16.26■□□□□ 0.19
SCAMP4-209ENST00000585335 PCDHA2Q9Y5H9 948 aa16.26■□□□□ 0.19
SCAMP4-209ENST00000585335 NR2E3Q9Y5X4 410 aa16.26■□□□□ 0.19
SCAMP4-209ENST00000585335 BRCA2P51587 3418 aa16.26■□□□□ 0.19
SCAMP4-209ENST00000585335 A0A1W2PQ27 194 aa16.25■□□□□ 0.19
SCAMP4-209ENST00000585335 A0A1W2PQ64 194 aa16.25■□□□□ 0.19
SCAMP4-209ENST00000585335 A0A1W2PQD8 194 aa16.25■□□□□ 0.19
SCAMP4-209ENST00000585335 TMEM150BA6NC51 233 aa16.25■□□□□ 0.19
SCAMP4-209ENST00000585335 ZBTB42B2RXF5 422 aa16.25■□□□□ 0.19
SCAMP4-209ENST00000585335 DGAT1O75907 488 aa16.25■□□□□ 0.19
SCAMP4-209ENST00000585335 C22orf31O95567 290 aa16.25■□□□□ 0.19
SCAMP4-209ENST00000585335 PLCG1P19174 1290 aa16.25■□□□□ 0.19
SCAMP4-209ENST00000585335 CMA1P23946 247 aa16.25■□□□□ 0.19
SCAMP4-209ENST00000585335 STAT6P42226 847 aa16.25■□□□□ 0.19
SCAMP4-209ENST00000585335 RARRES1P49788 294 aa16.25■□□□□ 0.19
SCAMP4-209ENST00000585335 NPEPPSP55786 919 aa16.25■□□□□ 0.19
SCAMP4-209ENST00000585335 ADAM17P78536 824 aa16.25■□□□□ 0.19
SCAMP4-209ENST00000585335 GRB10Q13322 594 aa16.25■□□□□ 0.19
SCAMP4-209ENST00000585335 RESP18Q5W5W9 173 aa16.25■□□□□ 0.19
SCAMP4-209ENST00000585335 SHC4Q6S5L8 630 aa16.25■□□□□ 0.19
SCAMP4-209ENST00000585335 C7orf61Q8IZ16 206 aa16.25■□□□□ 0.19
SCAMP4-209ENST00000585335 METTL13Q8N6R0 699 aa16.25■□□□□ 0.19
SCAMP4-209ENST00000585335 CAGE1Q8TC20 777 aa16.25■□□□□ 0.19
SCAMP4-209ENST00000585335 PNMA5Q96PV4 448 aa16.25■□□□□ 0.19
SCAMP4-209ENST00000585335 MAP7D2Q96T17 732 aa16.25■□□□□ 0.19
SCAMP4-209ENST00000585335 PLIN2Q99541 437 aa16.25■□□□□ 0.19
SCAMP4-209ENST00000585335 BHMT2Q9H2M3 363 aa16.25■□□□□ 0.19
SCAMP4-209ENST00000585335 ATP6V0A4Q9HBG4 840 aa16.25■□□□□ 0.19
SCAMP4-209ENST00000585335 PRDM5Q9NQX1 630 aaPredicted RBP16.25■□□□□ 0.19
SCAMP4-209ENST00000585335 TCHHQ07283 1943 aa16.25■□□□□ 0.19
SCAMP4-209ENST00000585335 LOXHD1Q8IVV2 1947 aa16.25■□□□□ 0.19
SCAMP4-209ENST00000585335 SMIM35A0A1B0GVV1 85 aa16.24■□□□□ 0.19
SCAMP4-209ENST00000585335 GOLGA6L22H0YM25 854 aa16.24■□□□□ 0.19
SCAMP4-209ENST00000585335 M0QZ92 97 aa16.24■□□□□ 0.19
SCAMP4-209ENST00000585335 CAND2O75155 1236 aa16.24■□□□□ 0.19
SCAMP4-209ENST00000585335 MAFO75444 373 aaPredicted RBP16.24■□□□□ 0.19
SCAMP4-209ENST00000585335 SSBP05455 408 aaKnown RBP eCLIP16.24■□□□□ 0.19
SCAMP4-209ENST00000585335 RGS19P49795 217 aa16.24■□□□□ 0.19
SCAMP4-209ENST00000585335 ZNF200P98182 395 aaPredicted RBP16.24■□□□□ 0.19
SCAMP4-209ENST00000585335 FAAP100Q0VG06 881 aa16.24■□□□□ 0.19
SCAMP4-209ENST00000585335 ECM1Q16610 540 aa16.24■□□□□ 0.19
SCAMP4-209ENST00000585335 MARCH8Q5T0T0 291 aa16.24■□□□□ 0.19
SCAMP4-209ENST00000585335 USP49Q70CQ1 688 aa16.24■□□□□ 0.19
SCAMP4-209ENST00000585335 IQUBQ8NA54 791 aa16.24■□□□□ 0.19
SCAMP4-209ENST00000585335 MCPH1Q8NEM0 835 aa16.24■□□□□ 0.19
SCAMP4-209ENST00000585335 TCP11Q8WWU5 503 aa16.24■□□□□ 0.19
SCAMP4-209ENST00000585335 MRPS27Q92552 414 aaKnown RBP16.24■□□□□ 0.19
SCAMP4-209ENST00000585335 HIPK3Q9H422 1215 aa16.24■□□□□ 0.19
SCAMP4-209ENST00000585335 CUEDC2Q9H467 287 aa16.24■□□□□ 0.19
SCAMP4-209ENST00000585335 E9PMD0 336 aa16.23■□□□□ 0.19
SCAMP4-209ENST00000585335 ZBTB39O15060 712 aa16.23■□□□□ 0.19
SCAMP4-209ENST00000585335 USO1O60763 962 aaKnown RBP16.23■□□□□ 0.19
SCAMP4-209ENST00000585335 PLA2G4BP0C869 781 aa16.23■□□□□ 0.19
SCAMP4-209ENST00000585335 EMC2Q15006 297 aa16.23■□□□□ 0.19
SCAMP4-209ENST00000585335 EFCAB12Q6NXP0 572 aa16.23■□□□□ 0.19
SCAMP4-209ENST00000585335 PADI6Q6TGC4 694 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms