RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 GINS2Q9Y248 185 aa13.95□□□□□ -0.18
SS18-225ENST00000585121 IGSF9BQ9UPX0 1349 aa13.95□□□□□ -0.18
SS18-225ENST00000585121 KDM3AQ9Y4C1 1321 aa13.95□□□□□ -0.18
SS18-225ENST00000585121 ENPP3O14638 875 aa13.95□□□□□ -0.18
SS18-225ENST00000585121 CCNT1O60563 726 aaKnown RBP13.95□□□□□ -0.18
SS18-225ENST00000585121 ARHGEF15O94989 841 aa13.95□□□□□ -0.18
SS18-225ENST00000585121 LARGE1O95461 756 aa13.95□□□□□ -0.18
SS18-225ENST00000585121 POU3F3P20264 500 aaPredicted RBP13.95□□□□□ -0.18
SS18-225ENST00000585121 PRKCEQ02156 737 aa13.95□□□□□ -0.18
SS18-225ENST00000585121 PPP4R3AQ6IN85 833 aa13.95□□□□□ -0.18
SS18-225ENST00000585121 KIAA0319LQ8IZA0 1049 aa13.95□□□□□ -0.18
SS18-225ENST00000585121 ZNF710Q8N1W2 664 aa13.95□□□□□ -0.18
SS18-225ENST00000585121 NSUN7Q8NE18 718 aaKnown RBP13.95□□□□□ -0.18
SS18-225ENST00000585121 GJA10Q969M2 543 aa13.95□□□□□ -0.18
SS18-225ENST00000585121 FAM20AQ96MK3 541 aa13.95□□□□□ -0.18
SS18-225ENST00000585121 MAP7D2Q96T17 732 aa13.95□□□□□ -0.18
SS18-225ENST00000585121 CHD7Q9P2D1 2997 aa13.95□□□□□ -0.18
SS18-225ENST00000585121 MTUS1Q9ULD2 1270 aa13.95□□□□□ -0.18
SS18-225ENST00000585121 PADI3Q9ULW8 664 aa13.95□□□□□ -0.18
SS18-225ENST00000585121 GBF1Q92538 1859 aa13.94□□□□□ -0.18
SS18-225ENST00000585121 DKC1O60832 514 aaKnown RBP eCLIP13.94□□□□□ -0.18
SS18-225ENST00000585121 RPS6KA5O75582 802 aa13.94□□□□□ -0.18
SS18-225ENST00000585121 BAG4O95429 457 aaKnown RBP13.94□□□□□ -0.18
SS18-225ENST00000585121 C22orf31O95567 290 aa13.94□□□□□ -0.18
SS18-225ENST00000585121 FDPSP14324 419 aaKnown RBP13.94□□□□□ -0.18
SS18-225ENST00000585121 GRB10Q13322 594 aa13.94□□□□□ -0.18
SS18-225ENST00000585121 SKIV2LQ15477 1246 aaKnown RBP13.94□□□□□ -0.18
SS18-225ENST00000585121 ETNPPLQ8TBG4 499 aa13.94□□□□□ -0.18
SS18-225ENST00000585121 OXER1Q8TDS5 423 aa13.94□□□□□ -0.18
SS18-225ENST00000585121 ZSCAN31Q96LW9 406 aaPredicted RBP13.94□□□□□ -0.18
SS18-225ENST00000585121 AGO3Q9H9G7 860 aaKnown RBP13.94□□□□□ -0.18
SS18-225ENST00000585121 GJB4Q9NTQ9 266 aa13.94□□□□□ -0.18
SS18-225ENST00000585121 RNF216Q9NWF9 866 aaPredicted RBP13.94□□□□□ -0.18
SS18-225ENST00000585121 LMCD1Q9NZU5 365 aa13.94□□□□□ -0.18
SS18-225ENST00000585121 MTCH2Q9Y6C9 303 aa13.94□□□□□ -0.18
SS18-225ENST00000585121 EPOPA6NHQ4 379 aa13.93□□□□□ -0.18
SS18-225ENST00000585121 ZBTB42B2RXF5 422 aa13.93□□□□□ -0.18
SS18-225ENST00000585121 TBX3O15119 743 aa13.93□□□□□ -0.18
SS18-225ENST00000585121 DTNBO60941 627 aa13.93□□□□□ -0.18
SS18-225ENST00000585121 CRYBB1P53674 252 aaPredicted RBP13.93□□□□□ -0.18
SS18-225ENST00000585121 NFX1Q12986 1120 aaKnown RBP13.93□□□□□ -0.18
SS18-225ENST00000585121 SAFBQ15424 915 aaKnown RBP eCLIP13.93□□□□□ -0.18
SS18-225ENST00000585121 XKR3Q5GH77 459 aa13.93□□□□□ -0.18
SS18-225ENST00000585121 EFCAB12Q6NXP0 572 aa13.93□□□□□ -0.18
SS18-225ENST00000585121 FIBCD1Q8N539 461 aa13.93□□□□□ -0.18
SS18-225ENST00000585121 FBXO22Q8NEZ5 403 aa13.93□□□□□ -0.18
SS18-225ENST00000585121 SP7Q8TDD2 431 aaPredicted RBP13.93□□□□□ -0.18
SS18-225ENST00000585121 UPF2Q9HAU5 1272 aaKnown RBP13.93□□□□□ -0.18
SS18-225ENST00000585121 THEGQ9P2T0 379 aa13.93□□□□□ -0.18
SS18-225ENST00000585121 AKT3Q9Y243 479 aa13.93□□□□□ -0.18
SS18-225ENST00000585121 UNC80Q8N2C7 3258 aa13.93□□□□□ -0.18
SS18-225ENST00000585121 EYSQ5T1H1 3165 aa13.92□□□□□ -0.18
SS18-225ENST00000585121 PRUNE2Q8WUY3 3088 aa13.92□□□□□ -0.18
SS18-225ENST00000585121 GPR182O15218 404 aa13.92□□□□□ -0.18
SS18-225ENST00000585121 SLC37A4O43826 429 aa13.92□□□□□ -0.18
SS18-225ENST00000585121 ZNF862O60290 1169 aa13.92□□□□□ -0.18
SS18-225ENST00000585121 JAK2O60674 1132 aa13.92□□□□□ -0.18
SS18-225ENST00000585121 STAG3L1P0CL83 205 aa13.92□□□□□ -0.18
SS18-225ENST00000585121 TBC1D8BQ0IIM8 1120 aa13.92□□□□□ -0.18
SS18-225ENST00000585121 KIZQ2M2Z5 673 aa13.92□□□□□ -0.18
SS18-225ENST00000585121 C8orf34Q49A92 452 aa13.92□□□□□ -0.18
SS18-225ENST00000585121 SLFN12Q8IYM2 578 aa13.92□□□□□ -0.18
SS18-225ENST00000585121 GDPD5Q8WTR4 605 aa13.92□□□□□ -0.18
SS18-225ENST00000585121 SYMPKQ92797 1274 aaKnown RBP13.92□□□□□ -0.18
SS18-225ENST00000585121 SUGCTQ9HAC7 445 aa13.92□□□□□ -0.18
SS18-225ENST00000585121 KCNMB3Q9NPA1 279 aa13.92□□□□□ -0.18
SS18-225ENST00000585121 SEPT9Q9UHD8 586 aaPredicted RBP13.92□□□□□ -0.18
SS18-225ENST00000585121 DENND3A2RUS2 1198 aa13.91□□□□□ -0.18
SS18-225ENST00000585121 DDX11L8A8MPP1 907 aa13.91□□□□□ -0.18
SS18-225ENST00000585121 MMP1P03956 469 aa13.91□□□□□ -0.18
SS18-225ENST00000585121 VTNP04004 478 aa13.91□□□□□ -0.18
SS18-225ENST00000585121 DNM2P50570 870 aa13.91□□□□□ -0.18
SS18-225ENST00000585121 CLCN3P51790 818 aa13.91□□□□□ -0.18
SS18-225ENST00000585121 FOSBP53539 338 aa13.91□□□□□ -0.18
SS18-225ENST00000585121 PSMC5P62195 406 aa13.91□□□□□ -0.18
SS18-225ENST00000585121 CDC42EP1Q00587 391 aa13.91□□□□□ -0.18
SS18-225ENST00000585121 NR5A1Q13285 461 aa13.91□□□□□ -0.18
SS18-225ENST00000585121 PPP2R5CQ13362 524 aa13.91□□□□□ -0.18
SS18-225ENST00000585121 UGCGQ16739 394 aa13.91□□□□□ -0.18
SS18-225ENST00000585121 TMEM266Q2M3C6 531 aa13.91□□□□□ -0.18
SS18-225ENST00000585121 B3GNT9Q6UX72 402 aa13.91□□□□□ -0.18
SS18-225ENST00000585121 SPRED2Q7Z698 418 aa13.91□□□□□ -0.18
SS18-225ENST00000585121 NPAS4Q8IUM7 802 aa13.91□□□□□ -0.18
SS18-225ENST00000585121 CCDC83Q8IWF9 413 aa13.91□□□□□ -0.18
SS18-225ENST00000585121 IL27Q8NEV9 243 aa13.91□□□□□ -0.18
SS18-225ENST00000585121 ATXN2LQ8WWM7 1075 aaKnown RBP13.91□□□□□ -0.18
SS18-225ENST00000585121 SCLT1Q96NL6 688 aa13.91□□□□□ -0.18
SS18-225ENST00000585121 LLPHQ9BRT6 129 aaKnown RBP13.91□□□□□ -0.18
SS18-225ENST00000585121 C17orf80Q9BSJ5 609 aa13.91□□□□□ -0.18
SS18-225ENST00000585121 SH2B1Q9NRF2 756 aaPredicted RBP13.91□□□□□ -0.18
SS18-225ENST00000585121 LRFN2Q9ULH4 789 aa13.91□□□□□ -0.18
SS18-225ENST00000585121 RWDD3Q9Y3V2 267 aa13.91□□□□□ -0.18
SS18-225ENST00000585121 CUL9Q8IWT3 2517 aa13.91□□□□□ -0.18
SS18-225ENST00000585121 MICAL3Q7RTP6 2002 aa13.91□□□□□ -0.18
SS18-225ENST00000585121 RBAK-RBAKDNI3L0D1 243 aa13.9□□□□□ -0.18
SS18-225ENST00000585121 QARSP47897 775 aaKnown RBP13.9□□□□□ -0.18
SS18-225ENST00000585121 BTG3Q14201 252 aaPredicted RBP13.9□□□□□ -0.18
SS18-225ENST00000585121 PTPROQ16827 1216 aa13.9□□□□□ -0.18
SS18-225ENST00000585121 MTERF2Q49AM1 385 aa13.9□□□□□ -0.18
SS18-225ENST00000585121 EPC2Q52LR7 807 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms