RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	RAD9A	Q99638	391 aa		15.05	■□□□□ -0
SREBF1-223	ENST00000584760	UBE2Z	Q9H832	354 aa	Predicted RBP	15.05	■□□□□ -0
SREBF1-223	ENST00000584760	TCEAL9	Q9UHQ7	104 aa		15.05	■□□□□ -0
SREBF1-223	ENST00000584760	PCDHA10	Q9Y5I2	948 aa		15.05	■□□□□ -0
SREBF1-223	ENST00000584760	MAFB	Q9Y5Q3	323 aa	Predicted RBP	15.05	■□□□□ -0
SREBF1-223	ENST00000584760	ARID2	Q68CP9	1835 aa		15.04	■□□□□ -0
SREBF1-223	ENST00000584760	COL1A2	P08123	1366 aa		15.04	■□□□□ -0
SREBF1-223	ENST00000584760	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	15.04	■□□□□ -0
SREBF1-223	ENST00000584760	CCDC194	A0A1B0GVG4	234 aa		15.04	■□□□□ -0
SREBF1-223	ENST00000584760	LINC01553	A4QN01	128 aa		15.04	■□□□□ -0
SREBF1-223	ENST00000584760	WDR64	B1ANS9	1081 aa		15.04	■□□□□ -0
SREBF1-223	ENST00000584760	ZBTB42	B2RXF5	422 aa		15.04	■□□□□ -0
SREBF1-223	ENST00000584760	SLC37A4	O43826	429 aa		15.04	■□□□□ -0
SREBF1-223	ENST00000584760	HBP1	O60381	514 aa		15.04	■□□□□ -0
SREBF1-223	ENST00000584760	GAS7	O60861	476 aa		15.04	■□□□□ -0
SREBF1-223	ENST00000584760	EFCAB14	O75071	495 aa		15.04	■□□□□ -0
SREBF1-223	ENST00000584760	PSMD10	O75832	226 aa		15.04	■□□□□ -0
SREBF1-223	ENST00000584760	GJB5	O95377	273 aa		15.04	■□□□□ -0
SREBF1-223	ENST00000584760	RPLP2	P05387	115 aa	Known RBP	15.04	■□□□□ -0
SREBF1-223	ENST00000584760	KCNA5	P22460	613 aa		15.04	■□□□□ -0
SREBF1-223	ENST00000584760	SSTR3	P32745	418 aa	Predicted RBP	15.04	■□□□□ -0
SREBF1-223	ENST00000584760	ERVK-21	P61565	698 aa		15.04	■□□□□ -0
SREBF1-223	ENST00000584760	EARS2	Q5JPH6	523 aa	Known RBP	15.04	■□□□□ -0
SREBF1-223	ENST00000584760	B3GNT9	Q6UX72	402 aa		15.04	■□□□□ -0
SREBF1-223	ENST00000584760	NEK8	Q86SG6	692 aa		15.04	■□□□□ -0
SREBF1-223	ENST00000584760	ALYREF	Q86V81	257 aa	Known RBP	15.04	■□□□□ -0
SREBF1-223	ENST00000584760	GJD3	Q8N144	294 aa		15.04	■□□□□ -0
SREBF1-223	ENST00000584760	DBF4B	Q8NFT6	615 aa		15.04	■□□□□ -0
SREBF1-223	ENST00000584760	DNAJB3	Q8WWF6	145 aa		15.04	■□□□□ -0
SREBF1-223	ENST00000584760	TNPO1	Q92973	898 aa	Known RBP	15.04	■□□□□ -0
SREBF1-223	ENST00000584760	COL4A6	Q14031	1691 aa		15.03	■□□□□ -0
SREBF1-223	ENST00000584760	FAM205C	A6NFA0	338 aa		15.03	■□□□□ -0
SREBF1-223	ENST00000584760	MMP1	P03956	469 aa		15.03	■□□□□ -0
SREBF1-223	ENST00000584760	PSAP	P07602	524 aa		15.03	■□□□□ -0
SREBF1-223	ENST00000584760	KRT2	P35908	639 aa		15.03	■□□□□ -0
SREBF1-223	ENST00000584760	NR5A1	Q13285	461 aa		15.03	■□□□□ -0
SREBF1-223	ENST00000584760	IKBKE	Q14164	716 aa		15.03	■□□□□ -0
SREBF1-223	ENST00000584760	LETM2	Q2VYF4	491 aa		15.03	■□□□□ -0
SREBF1-223	ENST00000584760	PIK3AP1	Q6ZUJ8	805 aa		15.03	■□□□□ -0
SREBF1-223	ENST00000584760	RSPH3	Q86UC2	560 aa		15.03	■□□□□ -0
SREBF1-223	ENST00000584760	CCDC83	Q8IWF9	413 aa		15.03	■□□□□ -0
SREBF1-223	ENST00000584760	FAM178B	Q8IXR5	827 aa		15.03	■□□□□ -0
SREBF1-223	ENST00000584760	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	15.03	■□□□□ -0
SREBF1-223	ENST00000584760	TEKT3	Q9BXF9	490 aa		15.03	■□□□□ -0
SREBF1-223	ENST00000584760	FAM49A	Q9H0Q0	323 aa	Predicted RBP	15.03	■□□□□ -0
SREBF1-223	ENST00000584760	UNC45A	Q9H3U1	944 aa		15.03	■□□□□ -0
SREBF1-223	ENST00000584760	DISC1	Q9NRI5	854 aa		15.03	■□□□□ -0
SREBF1-223	ENST00000584760	DDX25	Q9UHL0	483 aa	Known RBP	15.03	■□□□□ -0
SREBF1-223	ENST00000584760	PCDHA2	Q9Y5H9	948 aa		15.03	■□□□□ -0
SREBF1-223	ENST00000584760	NLRC5	Q86WI3	1866 aa		15.03	■□□□□ -0
SREBF1-223	ENST00000584760	SMIM35	A0A1B0GVV1	85 aa		15.02	■□□□□ -0
SREBF1-223	ENST00000584760	CHMP2A	O43633	222 aa		15.02	■□□□□ -0
SREBF1-223	ENST00000584760	ZNF862	O60290	1169 aa		15.02	■□□□□ -0
SREBF1-223	ENST00000584760	IL9	P15248	144 aa		15.02	■□□□□ -0
SREBF1-223	ENST00000584760	GCFC2	P16383	781 aa	Known RBP	15.02	■□□□□ -0
SREBF1-223	ENST00000584760	SFN	P31947	248 aa		15.02	■□□□□ -0
SREBF1-223	ENST00000584760	JAK3	P52333	1124 aa		15.02	■□□□□ -0
SREBF1-223	ENST00000584760	MRPS6	P82932	125 aa	Known RBP	15.02	■□□□□ -0
SREBF1-223	ENST00000584760	UGCG	Q16739	394 aa		15.02	■□□□□ -0
SREBF1-223	ENST00000584760	LEXM	Q3ZCV2	418 aa		15.02	■□□□□ -0
SREBF1-223	ENST00000584760	PPP4R3A	Q6IN85	833 aa		15.02	■□□□□ -0
SREBF1-223	ENST00000584760	MTHFD1L	Q6UB35	978 aa		15.02	■□□□□ -0
SREBF1-223	ENST00000584760	RDM1	Q8NG50	284 aa		15.02	■□□□□ -0
SREBF1-223	ENST00000584760	BBX	Q8WY36	941 aa	Predicted RBP	15.02	■□□□□ -0
SREBF1-223	ENST00000584760	SEPT8	Q92599	483 aa		15.02	■□□□□ -0
SREBF1-223	ENST00000584760	LLPH	Q9BRT6	129 aa	Known RBP	15.02	■□□□□ -0
SREBF1-223	ENST00000584760	IFIH1	Q9BYX4	1025 aa	Known RBP	15.02	■□□□□ -0
SREBF1-223	ENST00000584760	KCNMB3	Q9NPA1	279 aa		15.02	■□□□□ -0
SREBF1-223	ENST00000584760	SH2B1	Q9NRF2	756 aa	Predicted RBP	15.02	■□□□□ -0
SREBF1-223	ENST00000584760	GABBR1	Q9UBS5	961 aa		15.02	■□□□□ -0
SREBF1-223	ENST00000584760	SAMM50	Q9Y512	469 aa		15.02	■□□□□ -0
SREBF1-223	ENST00000584760	CDY2A	Q9Y6F7	541 aa		15.02	■□□□□ -0
SREBF1-223	ENST00000584760	TTC3	P53804	2025 aa		15.01	□□□□□ -0.01
SREBF1-223	ENST00000584760	PRR33	A8MZF0	331 aa		15.01	□□□□□ -0.01
SREBF1-223	ENST00000584760	C22orf31	O95567	290 aa		15.01	□□□□□ -0.01
SREBF1-223	ENST00000584760	GHR	P10912	638 aa		15.01	□□□□□ -0.01
SREBF1-223	ENST00000584760	KLRC1	P26715	233 aa		15.01	□□□□□ -0.01
SREBF1-223	ENST00000584760	FOSB	P53539	338 aa		15.01	□□□□□ -0.01
SREBF1-223	ENST00000584760	LPIN1	Q14693	890 aa		15.01	□□□□□ -0.01
SREBF1-223	ENST00000584760	RABEP1	Q15276	862 aa		15.01	□□□□□ -0.01
SREBF1-223	ENST00000584760	ZNF484	Q5JVG2	852 aa		15.01	□□□□□ -0.01
SREBF1-223	ENST00000584760	FBXO47	Q5MNV8	452 aa		15.01	□□□□□ -0.01
SREBF1-223	ENST00000584760	PTCRA	Q6ISU1	281 aa	Predicted RBP	15.01	□□□□□ -0.01
SREBF1-223	ENST00000584760	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	15.01	□□□□□ -0.01
SREBF1-223	ENST00000584760	CKAP2L	Q8IYA6	745 aa		15.01	□□□□□ -0.01
SREBF1-223	ENST00000584760	FBXO22	Q8NEZ5	403 aa		15.01	□□□□□ -0.01
SREBF1-223	ENST00000584760	APBB2	Q92870	758 aa		15.01	□□□□□ -0.01
SREBF1-223	ENST00000584760	FAM167A	Q96KS9	214 aa		15.01	□□□□□ -0.01
SREBF1-223	ENST00000584760	ZSCAN31	Q96LW9	406 aa	Predicted RBP	15.01	□□□□□ -0.01
SREBF1-223	ENST00000584760	C17orf80	Q9BSJ5	609 aa		15.01	□□□□□ -0.01
SREBF1-223	ENST00000584760	BRMS1	Q9HCU9	246 aa		15.01	□□□□□ -0.01
SREBF1-223	ENST00000584760	VAV3	Q9UKW4	847 aa		15.01	□□□□□ -0.01
SREBF1-223	ENST00000584760	RALGAPA2	Q2PPJ7	1873 aa		15.01	□□□□□ -0.01
SREBF1-223	ENST00000584760	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	15	□□□□□ -0.01
SREBF1-223	ENST00000584760	BTBD18	B2RXH4	712 aa		15	□□□□□ -0.01
SREBF1-223	ENST00000584760	OAT	P04181	439 aa		15	□□□□□ -0.01
SREBF1-223	ENST00000584760	PRKCE	Q02156	737 aa		15	□□□□□ -0.01
SREBF1-223	ENST00000584760	DIS3L2	Q8IYB7	885 aa	Known RBP	15	□□□□□ -0.01
SREBF1-223	ENST00000584760	INSL6	Q9Y581	213 aa		15	□□□□□ -0.01
SREBF1-223	ENST00000584760	TRPV2	Q9Y5S1	764 aa		15	□□□□□ -0.01

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms