RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 DNAJC12Q9UKB3 198 aa13.98□□□□□ -0.17
RNF43-208ENST00000584437 LEMD3Q9Y2U8 911 aa13.98□□□□□ -0.17
RNF43-208ENST00000584437 TFDP2Q14188 446 aa13.98□□□□□ -0.17
RNF43-208ENST00000584437 NIM1KQ8IY84 436 aa13.98□□□□□ -0.17
RNF43-208ENST00000584437 GSPT2Q8IYD1 628 aaKnown RBP13.98□□□□□ -0.17
RNF43-208ENST00000584437 FAM167BQ9BTA0 163 aa13.98□□□□□ -0.17
RNF43-208ENST00000584437 KANSL2Q9H9L4 492 aa13.98□□□□□ -0.17
RNF43-208ENST00000584437 SNX5Q9Y5X3 404 aa13.98□□□□□ -0.17
RNF43-208ENST00000584437 PCYT1AP49585 367 aa13.97□□□□□ -0.17
RNF43-208ENST00000584437 IRX1P78414 480 aaPredicted RBP13.97□□□□□ -0.17
RNF43-208ENST00000584437 HP1BP3Q5SSJ5 553 aaPredicted RBP13.97□□□□□ -0.17
RNF43-208ENST00000584437 OR6B2Q6IFH4 312 aa13.97□□□□□ -0.17
RNF43-208ENST00000584437 FAF2Q96CS3 445 aa13.97□□□□□ -0.17
RNF43-208ENST00000584437 ORAI2Q96SN7 254 aa13.97□□□□□ -0.17
RNF43-208ENST00000584437 NOC2LQ9Y3T9 749 aaKnown RBP13.97□□□□□ -0.17
RNF43-208ENST00000584437 ATP7AQ04656 1500 aa13.97□□□□□ -0.17
RNF43-208ENST00000584437 ABCA5Q8WWZ7 1642 aa13.97□□□□□ -0.17
RNF43-208ENST00000584437 GGPS1O95749 300 aa13.97□□□□□ -0.17
RNF43-208ENST00000584437 DHX40Q8IX18 779 aaKnown RBP13.97□□□□□ -0.17
RNF43-208ENST00000584437 LCORLQ8N3X6 602 aa13.97□□□□□ -0.17
RNF43-208ENST00000584437 ICA1LQ8NDH6 482 aa13.97□□□□□ -0.17
RNF43-208ENST00000584437 KCNV2Q8TDN2 545 aa13.97□□□□□ -0.17
RNF43-208ENST00000584437 EDEM3Q9BZQ6 932 aa13.97□□□□□ -0.17
RNF43-208ENST00000584437 WARS2Q9UGM6 360 aaKnown RBP13.97□□□□□ -0.17
RNF43-208ENST00000584437 PTPN12Q05209 780 aaKnown RBP13.97□□□□□ -0.17
RNF43-208ENST00000584437 PLEKHG1Q9ULL1 1385 aa13.97□□□□□ -0.17
RNF43-208ENST00000584437 KIF21AQ7Z4S6 1674 aa13.97□□□□□ -0.17
RNF43-208ENST00000584437 MEIS1O00470 390 aa13.97□□□□□ -0.17
RNF43-208ENST00000584437 DHX34Q14147 1143 aaKnown RBP13.97□□□□□ -0.17
RNF43-208ENST00000584437 PROSER3Q2NL68 480 aa13.97□□□□□ -0.17
RNF43-208ENST00000584437 NFRKBQ6P4R8 1299 aa13.97□□□□□ -0.17
RNF43-208ENST00000584437 RGS9BPQ6ZS82 235 aa13.97□□□□□ -0.17
RNF43-208ENST00000584437 CEP170P1Q96L14 293 aa13.97□□□□□ -0.17
RNF43-208ENST00000584437 ING2Q9H160 280 aa13.97□□□□□ -0.17
RNF43-208ENST00000584437 EPN3Q9H201 632 aa13.97□□□□□ -0.17
RNF43-208ENST00000584437 SNX25Q9H3E2 840 aa13.97□□□□□ -0.17
RNF43-208ENST00000584437 CPSF1Q10570 1443 aaKnown RBP13.97□□□□□ -0.17
RNF43-208ENST00000584437 CCDC22O60826 627 aa13.96□□□□□ -0.17
RNF43-208ENST00000584437 ARHGDIAP52565 204 aa13.96□□□□□ -0.17
RNF43-208ENST00000584437 ORC2Q13416 577 aaPredicted RBP13.96□□□□□ -0.17
RNF43-208ENST00000584437 MIS18BP1Q6P0N0 1132 aa13.96□□□□□ -0.17
RNF43-208ENST00000584437 ERICH1Q86X53 443 aa13.96□□□□□ -0.17
RNF43-208ENST00000584437 THOC1Q96FV9 657 aaKnown RBP13.96□□□□□ -0.17
RNF43-208ENST00000584437 MTA3Q9BTC8 594 aa13.96□□□□□ -0.17
RNF43-208ENST00000584437 ALDH8A1Q9H2A2 487 aaPredicted RBP13.96□□□□□ -0.17
RNF43-208ENST00000584437 CNOT8Q9UFF9 292 aaKnown RBP13.96□□□□□ -0.17
RNF43-208ENST00000584437 ANAPC7Q9UJX3 599 aa13.96□□□□□ -0.17
RNF43-208ENST00000584437 IGSF1Q8N6C5 1336 aa13.96□□□□□ -0.17
RNF43-208ENST00000584437 KDM5CP41229 1560 aa13.96□□□□□ -0.17
RNF43-208ENST00000584437 BIRC2Q13490 618 aa13.96□□□□□ -0.17
RNF43-208ENST00000584437 DGKHQ86XP1 1220 aa13.96□□□□□ -0.17
RNF43-208ENST00000584437 CCDC24Q8N4L8 307 aa13.96□□□□□ -0.17
RNF43-208ENST00000584437 ZBTB18Q99592 522 aa13.96□□□□□ -0.17
RNF43-208ENST00000584437 RFX7Q2KHR2 1363 aa13.96□□□□□ -0.17
RNF43-208ENST00000584437 CATSPER1Q8NEC5 780 aa13.96□□□□□ -0.17
RNF43-208ENST00000584437 FAM161BQ96MY7 647 aa13.96□□□□□ -0.17
RNF43-208ENST00000584437 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.96□□□□□ -0.17
RNF43-208ENST00000584437 SENP1Q9P0U3 644 aa13.96□□□□□ -0.17
RNF43-208ENST00000584437 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.96□□□□□ -0.17
RNF43-208ENST00000584437 FOXP2O15409 715 aa13.96□□□□□ -0.18
RNF43-208ENST00000584437 DDIT3P35638 169 aa13.96□□□□□ -0.18
RNF43-208ENST00000584437 HDAC4P56524 1084 aa13.96□□□□□ -0.18
RNF43-208ENST00000584437 SLC12A1Q13621 1099 aa13.96□□□□□ -0.18
RNF43-208ENST00000584437 C4orf50Q6ZRC1 276 aa13.96□□□□□ -0.18
RNF43-208ENST00000584437 TRPV6Q9H1D0 765 aa13.96□□□□□ -0.18
RNF43-208ENST00000584437 PSD3Q9NYI0 1048 aa13.96□□□□□ -0.18
RNF43-208ENST00000584437 WDR64B1ANS9 1081 aa13.96□□□□□ -0.18
RNF43-208ENST00000584437 PPIP5K2O43314 1243 aa13.96□□□□□ -0.18
RNF43-208ENST00000584437 TFAMQ00059 246 aaKnown RBP13.96□□□□□ -0.18
RNF43-208ENST00000584437 BTBD6Q96KE9 485 aa13.96□□□□□ -0.18
RNF43-208ENST00000584437 ECM2O94769 699 aaPredicted RBP13.95□□□□□ -0.18
RNF43-208ENST00000584437 SASH1O94885 1247 aa13.95□□□□□ -0.18
RNF43-208ENST00000584437 MDH1P40925 334 aaKnown RBP13.95□□□□□ -0.18
RNF43-208ENST00000584437 PRCPP42785 496 aa13.95□□□□□ -0.18
RNF43-208ENST00000584437 DYNLL1P63167 89 aaKnown RBP13.95□□□□□ -0.18
RNF43-208ENST00000584437 GFPT1Q06210 699 aaPredicted RBP13.95□□□□□ -0.18
RNF43-208ENST00000584437 SMYD3Q9H7B4 428 aa13.95□□□□□ -0.18
RNF43-208ENST00000584437 XDHP47989 1333 aa13.95□□□□□ -0.18
RNF43-208ENST00000584437 ABL1P00519 1130 aa13.95□□□□□ -0.18
RNF43-208ENST00000584437 SERPINB4P48594 390 aa13.95□□□□□ -0.18
RNF43-208ENST00000584437 VSNL1P62760 191 aa13.95□□□□□ -0.18
RNF43-208ENST00000584437 BYSLQ13895 437 aaKnown RBP13.95□□□□□ -0.18
RNF43-208ENST00000584437 FAM83BQ5T0W9 1011 aa13.95□□□□□ -0.18
RNF43-208ENST00000584437 SLFN12LQ6IEE8 588 aa13.95□□□□□ -0.18
RNF43-208ENST00000584437 RSRC2Q7L4I2 434 aaKnown RBP13.95□□□□□ -0.18
RNF43-208ENST00000584437 SPATA4Q8NEY3 305 aa13.95□□□□□ -0.18
RNF43-208ENST00000584437 ANKRD7Q92527 254 aa13.95□□□□□ -0.18
RNF43-208ENST00000584437 ADAM22Q9P0K1 906 aa13.95□□□□□ -0.18
RNF43-208ENST00000584437 SLC12A6Q9UHW9 1150 aa13.95□□□□□ -0.18
RNF43-208ENST00000584437 PNMA6FA0A0J9YX94 578 aa13.95□□□□□ -0.18
RNF43-208ENST00000584437 SYCE1LA8MT33 242 aa13.95□□□□□ -0.18
RNF43-208ENST00000584437 PRKAB2O43741 272 aa13.95□□□□□ -0.18
RNF43-208ENST00000584437 PSMA2P25787 234 aa13.95□□□□□ -0.18
RNF43-208ENST00000584437 TBC1D9BQ66K14 1250 aa13.95□□□□□ -0.18
RNF43-208ENST00000584437 CNPY4Q8N129 248 aa13.95□□□□□ -0.18
RNF43-208ENST00000584437 COA7Q96BR5 231 aa13.95□□□□□ -0.18
RNF43-208ENST00000584437 SUCLA2Q9P2R7 463 aaPredicted RBP13.95□□□□□ -0.18
RNF43-208ENST00000584437 ARL2BPQ9Y2Y0 163 aa13.95□□□□□ -0.18
RNF43-208ENST00000584437 L3MBTL1Q9Y468 752 aa13.95□□□□□ -0.18
RNF43-208ENST00000584437 TTC26A0AVF1 554 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms