RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.33□□□□□ -0.92
ERBB2-216ENST00000584014 GOLGA6L4A6NEF3 574 aa9.33□□□□□ -0.92
ERBB2-216ENST00000584014 RBAK-RBAKDNI3L0D1 243 aa9.33□□□□□ -0.92
ERBB2-216ENST00000584014 YEATS4O95619 227 aa9.33□□□□□ -0.92
ERBB2-216ENST00000584014 CTSHP09668 335 aa9.33□□□□□ -0.92
ERBB2-216ENST00000584014 RAG1P15918 1043 aa9.33□□□□□ -0.92
ERBB2-216ENST00000584014 YWHABP31946 246 aaKnown RBP9.33□□□□□ -0.92
ERBB2-216ENST00000584014 THPOP40225 353 aa9.33□□□□□ -0.92
ERBB2-216ENST00000584014 NASPP49321 788 aaPredicted RBP9.33□□□□□ -0.92
ERBB2-216ENST00000584014 SLC26A2P50443 739 aa9.33□□□□□ -0.92
ERBB2-216ENST00000584014 CDK7P50613 346 aa9.33□□□□□ -0.92
ERBB2-216ENST00000584014 CCL23P55773 120 aa9.33□□□□□ -0.92
ERBB2-216ENST00000584014 NPEPPSP55786 919 aa9.33□□□□□ -0.92
ERBB2-216ENST00000584014 TBC1D8BQ0IIM8 1120 aa9.33□□□□□ -0.92
ERBB2-216ENST00000584014 TMEM62Q0P6H9 643 aa9.33□□□□□ -0.92
ERBB2-216ENST00000584014 HIC1Q14526 733 aa9.33□□□□□ -0.92
ERBB2-216ENST00000584014 XKR3Q5GH77 459 aa9.33□□□□□ -0.92
ERBB2-216ENST00000584014 B3GNT9Q6UX72 402 aa9.33□□□□□ -0.92
ERBB2-216ENST00000584014 UBE2Q1Q7Z7E8 422 aa9.33□□□□□ -0.92
ERBB2-216ENST00000584014 FAM126BQ8IXS8 530 aa9.33□□□□□ -0.92
ERBB2-216ENST00000584014 LRRC71Q8N4P6 559 aa9.33□□□□□ -0.92
ERBB2-216ENST00000584014 PDILTQ8N807 584 aa9.33□□□□□ -0.92
ERBB2-216ENST00000584014 ZNF579Q8NAF0 562 aaKnown RBP9.33□□□□□ -0.92
ERBB2-216ENST00000584014 RETREG2Q8NC44 543 aa9.33□□□□□ -0.92
ERBB2-216ENST00000584014 LMBR1Q8WVP7 490 aa9.33□□□□□ -0.92
ERBB2-216ENST00000584014 EPSTI1Q96J88 318 aa9.33□□□□□ -0.92
ERBB2-216ENST00000584014 ZNF668Q96K58 619 aaPredicted RBP9.33□□□□□ -0.92
ERBB2-216ENST00000584014 FAM167AQ96KS9 214 aa9.33□□□□□ -0.92
ERBB2-216ENST00000584014 TUFT1Q9NNX1 390 aa9.33□□□□□ -0.92
ERBB2-216ENST00000584014 WRAP73Q9P2S5 460 aaPredicted RBP9.33□□□□□ -0.92
ERBB2-216ENST00000584014 TUBE1Q9UJT0 475 aa9.33□□□□□ -0.92
ERBB2-216ENST00000584014 FBXO2Q9UK22 296 aaPredicted RBP9.33□□□□□ -0.92
ERBB2-216ENST00000584014 CIZ1Q9ULV3 898 aaPredicted RBP9.33□□□□□ -0.92
ERBB2-216ENST00000584014 GINS2Q9Y248 185 aa9.33□□□□□ -0.92
ERBB2-216ENST00000584014 SRPRBQ9Y5M8 271 aaKnown RBP9.33□□□□□ -0.92
ERBB2-216ENST00000584014 NRCAMQ92823 1304 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 IGSF9BQ9UPX0 1349 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 ARHGEF35A5YM69 484 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 RRN3P2A6NIE6 340 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 E9PMD0 336 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 CUTAO60888 179 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 SPATA31C1P0DKV0 1188 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 CYP2C18P33260 490 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 DDIT3P35638 169 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 LONP1P36776 959 aaKnown RBP9.32□□□□□ -0.92
ERBB2-216ENST00000584014 POLGP54098 1239 aaPredicted RBP9.32□□□□□ -0.92
ERBB2-216ENST00000584014 PTPN11Q06124 597 aaPredicted RBP9.32□□□□□ -0.92
ERBB2-216ENST00000584014 FAAP100Q0VG06 881 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 KARSQ15046 597 aaKnown RBP9.32□□□□□ -0.92
ERBB2-216ENST00000584014 ECM1Q16610 540 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 ZNF484Q5JVG2 852 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 ATL3Q6DD88 541 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 EFCAB12Q6NXP0 572 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 MTHFD1LQ6UB35 978 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 RUFY4Q6ZNE9 571 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 USP49Q70CQ1 688 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 ANO5Q75V66 913 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 IGSF22Q8N9C0 903 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 NEK9Q8TD19 979 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 KCNG4Q8TDN1 519 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 LEO1Q8WVC0 666 aaPredicted RBP9.32□□□□□ -0.92
ERBB2-216ENST00000584014 DNAJB3Q8WWF6 145 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 SYMPKQ92797 1274 aaKnown RBP9.32□□□□□ -0.92
ERBB2-216ENST00000584014 SCLT1Q96NL6 688 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 NACC1Q96RE7 527 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 HSD17B14Q9BPX1 270 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 LBHD1Q9BQE6 289 aaPredicted RBP9.32□□□□□ -0.92
ERBB2-216ENST00000584014 HIPK3Q9H422 1215 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 POLD4Q9HCU8 107 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 CYP26B1Q9NR63 512 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 CCDC39Q9UFE4 941 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 PCDHA7Q9UN72 937 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 DNM3Q9UQ16 869 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 AKT3Q9Y243 479 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 NR2E3Q9Y5X4 410 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 STK24Q9Y6E0 443 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 ALPK3Q96L96 1907 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 SCN10AQ9Y5Y9 1956 aa9.32□□□□□ -0.92
ERBB2-216ENST00000584014 EVPLQ92817 2033 aa9.31□□□□□ -0.92
ERBB2-216ENST00000584014 USO1O60763 962 aaKnown RBP9.31□□□□□ -0.92
ERBB2-216ENST00000584014 PPP6R2O75170 966 aa9.31□□□□□ -0.92
ERBB2-216ENST00000584014 VTNP04004 478 aa9.31□□□□□ -0.92
ERBB2-216ENST00000584014 IBSPP21815 317 aaPredicted RBP9.31□□□□□ -0.92
ERBB2-216ENST00000584014 RPA1P27694 616 aa9.31□□□□□ -0.92
ERBB2-216ENST00000584014 CLCN3P51790 818 aa9.31□□□□□ -0.92
ERBB2-216ENST00000584014 MDM2Q00987 491 aaPredicted RBP9.31□□□□□ -0.92
ERBB2-216ENST00000584014 RAD51AP2Q09MP3 1159 aa9.31□□□□□ -0.92
ERBB2-216ENST00000584014 BFSP2Q13515 415 aa9.31□□□□□ -0.92
ERBB2-216ENST00000584014 RRAGBQ5VZM2 374 aa9.31□□□□□ -0.92
ERBB2-216ENST00000584014 ANKRD33Q7Z3H0 272 aa9.31□□□□□ -0.92
ERBB2-216ENST00000584014 RSPH3Q86UC2 560 aa9.31□□□□□ -0.92
ERBB2-216ENST00000584014 C4orf19Q8IY42 314 aa9.31□□□□□ -0.92
ERBB2-216ENST00000584014 CCDC155Q8N6L0 562 aa9.31□□□□□ -0.92
ERBB2-216ENST00000584014 SLC43A3Q8NBI5 491 aa9.31□□□□□ -0.92
ERBB2-216ENST00000584014 AK8Q96MA6 479 aa9.31□□□□□ -0.92
ERBB2-216ENST00000584014 POLR3CQ9BUI4 534 aaPredicted RBP9.31□□□□□ -0.92
ERBB2-216ENST00000584014 SEZ6LQ9BYH1 1024 aa9.31□□□□□ -0.92
ERBB2-216ENST00000584014 SCAND2PQ9GZW5 306 aaPredicted RBP9.31□□□□□ -0.92
ERBB2-216ENST00000584014 BHMT2Q9H2M3 363 aa9.31□□□□□ -0.92
ERBB2-216ENST00000584014 PDLIM7Q9NR12 457 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms