RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 NOP2P46087 812 aaKnown RBP6.06□□□□□ -1.44
SS18-223ENST00000583595 PPM1FP49593 454 aaPredicted RBP6.06□□□□□ -1.44
SS18-223ENST00000583595 SEPHS1P49903 392 aa6.06□□□□□ -1.44
SS18-223ENST00000583595 POU5F1BQ06416 359 aa6.06□□□□□ -1.44
SS18-223ENST00000583595 TESK1Q15569 626 aa6.06□□□□□ -1.44
SS18-223ENST00000583595 ARHGAP44Q17R89 818 aa6.06□□□□□ -1.44
SS18-223ENST00000583595 RGL3Q3MIN7 710 aa6.06□□□□□ -1.44
SS18-223ENST00000583595 E4F1Q66K89 784 aaPredicted RBP6.06□□□□□ -1.44
SS18-223ENST00000583595 NLRX1Q86UT6 975 aa6.06□□□□□ -1.44
SS18-223ENST00000583595 AMOTL1Q8IY63 956 aa6.06□□□□□ -1.44
SS18-223ENST00000583595 FAM186BQ8IYM0 893 aa6.06□□□□□ -1.44
SS18-223ENST00000583595 IFNL2Q8IZJ0 200 aa6.06□□□□□ -1.44
SS18-223ENST00000583595 EFHBQ8N7U6 833 aa6.06□□□□□ -1.44
SS18-223ENST00000583595 ELF4Q99607 663 aaPredicted RBP6.06□□□□□ -1.44
SS18-223ENST00000583595 NMRK2Q9NPI5 230 aa6.06□□□□□ -1.44
SS18-223ENST00000583595 NLRC4Q9NPP4 1024 aa6.06□□□□□ -1.44
SS18-223ENST00000583595 LUZP4Q9P127 313 aa6.06□□□□□ -1.44
SS18-223ENST00000583595 DMTF1Q9Y222 760 aa6.06□□□□□ -1.44
SS18-223ENST00000583595 PTPN22Q9Y2R2 807 aa6.06□□□□□ -1.44
SS18-223ENST00000583595 NPIPB6E9PJ23 425 aa6.05□□□□□ -1.44
SS18-223ENST00000583595 DVL2O14641 736 aa6.05□□□□□ -1.44
SS18-223ENST00000583595 WNT9AO14904 365 aa6.05□□□□□ -1.44
SS18-223ENST00000583595 GSTA4O15217 222 aa6.05□□□□□ -1.44
SS18-223ENST00000583595 VAV1P15498 845 aa6.05□□□□□ -1.44
SS18-223ENST00000583595 RHCEP18577 417 aa6.05□□□□□ -1.44
SS18-223ENST00000583595 GLDCP23378 1020 aa6.05□□□□□ -1.44
SS18-223ENST00000583595 GRK2P25098 689 aa6.05□□□□□ -1.44
SS18-223ENST00000583595 BMP8BP34820 402 aa6.05□□□□□ -1.44
SS18-223ENST00000583595 ECE1P42892 770 aa6.05□□□□□ -1.44
SS18-223ENST00000583595 FXR1P51114 621 aaKnown RBP eCLIP6.05□□□□□ -1.44
SS18-223ENST00000583595 JAM2P57087 298 aa6.05□□□□□ -1.44
SS18-223ENST00000583595 LACTBP83111 547 aaPredicted RBP6.05□□□□□ -1.44
SS18-223ENST00000583595 SMAD3P84022 425 aaKnown RBP6.05□□□□□ -1.44
SS18-223ENST00000583595 RHDQ02161 417 aa6.05□□□□□ -1.44
SS18-223ENST00000583595 STK3Q13188 491 aa6.05□□□□□ -1.44
SS18-223ENST00000583595 SMAD2Q15796 467 aaKnown RBP6.05□□□□□ -1.44
SS18-223ENST00000583595 WDR78Q5VTH9 848 aa6.05□□□□□ -1.44
SS18-223ENST00000583595 XRRA1Q6P2D8 792 aa6.05□□□□□ -1.44
SS18-223ENST00000583595 OTOP1Q7RTM1 612 aa6.05□□□□□ -1.44
SS18-223ENST00000583595 LRRC56Q8IYG6 542 aaPredicted RBP6.05□□□□□ -1.44
SS18-223ENST00000583595 CHAMP1Q96JM3 812 aa6.05□□□□□ -1.44
SS18-223ENST00000583595 SLC2A13Q96QE2 648 aa6.05□□□□□ -1.44
SS18-223ENST00000583595 ACO2Q99798 780 aaKnown RBP6.05□□□□□ -1.44
SS18-223ENST00000583595 MYD88Q99836 296 aa6.05□□□□□ -1.44
SS18-223ENST00000583595 CDADC1Q9BWV3 514 aa6.05□□□□□ -1.44
SS18-223ENST00000583595 SLC12A9Q9BXP2 914 aa6.05□□□□□ -1.44
SS18-223ENST00000583595 MCOLN1Q9GZU1 580 aa6.05□□□□□ -1.44
SS18-223ENST00000583595 RNF38Q9H0F5 515 aa6.05□□□□□ -1.44
SS18-223ENST00000583595 ZNF552Q9H707 407 aaPredicted RBP6.05□□□□□ -1.44
SS18-223ENST00000583595 IPPQ9Y573 584 aa6.05□□□□□ -1.44
SS18-223ENST00000583595 PPP2R3BQ9Y5P8 575 aa6.05□□□□□ -1.44
SS18-223ENST00000583595 MYOCOSA0A1B0GUC4 107 aa6.04□□□□□ -1.44
SS18-223ENST00000583595 TCAF2A6NFQ2 919 aa6.04□□□□□ -1.44
SS18-223ENST00000583595 FAM47E-STBD1D6RA91 191 aa6.04□□□□□ -1.44
SS18-223ENST00000583595 TPP1O14773 563 aa6.04□□□□□ -1.44
SS18-223ENST00000583595 OFD1O75665 1012 aa6.04□□□□□ -1.44
SS18-223ENST00000583595 ZNF205O95201 554 aa6.04□□□□□ -1.44
SS18-223ENST00000583595 MED14OSP0DP75 135 aa6.04□□□□□ -1.44
SS18-223ENST00000583595 SLC5A1P13866 664 aa6.04□□□□□ -1.44
SS18-223ENST00000583595 PDE6AP16499 860 aa6.04□□□□□ -1.44
SS18-223ENST00000583595 KRT15P19012 456 aa6.04□□□□□ -1.44
SS18-223ENST00000583595 ENDOUP21128 410 aaKnown RBP6.04□□□□□ -1.44
SS18-223ENST00000583595 AKAP5P24588 427 aa6.04□□□□□ -1.44
SS18-223ENST00000583595 LSP1P33241 339 aa6.04□□□□□ -1.44
SS18-223ENST00000583595 ALDH5A1P51649 535 aaPredicted RBP6.04□□□□□ -1.44
SS18-223ENST00000583595 AK2P54819 239 aa6.04□□□□□ -1.44
SS18-223ENST00000583595 RTP1P59025 263 aa6.04□□□□□ -1.44
SS18-223ENST00000583595 CRY1Q16526 586 aa6.04□□□□□ -1.44
SS18-223ENST00000583595 KIZQ2M2Z5 673 aa6.04□□□□□ -1.44
SS18-223ENST00000583595 ADGRF1Q5T601 910 aa6.04□□□□□ -1.44
SS18-223ENST00000583595 MBLAC2Q68D91 279 aa6.04□□□□□ -1.44
SS18-223ENST00000583595 TMEM132EQ6IEE7 984 aa6.04□□□□□ -1.44
SS18-223ENST00000583595 SPOCD1Q6ZMY3 1216 aa6.04□□□□□ -1.44
SS18-223ENST00000583595 CATIPQ7Z7H3 387 aa6.04□□□□□ -1.44
SS18-223ENST00000583595 CPNE8Q86YQ8 564 aa6.04□□□□□ -1.44
SS18-223ENST00000583595 C1QL4Q86Z23 238 aa6.04□□□□□ -1.44
SS18-223ENST00000583595 SMAP1Q8IYB5 467 aaPredicted RBP6.04□□□□□ -1.44
SS18-223ENST00000583595 FAM43AQ8N2R8 423 aa6.04□□□□□ -1.44
SS18-223ENST00000583595 FAM156AQ8NDB6 213 aa6.04□□□□□ -1.44
SS18-223ENST00000583595 ZSCAN18Q8TBC5 510 aaPredicted RBP6.04□□□□□ -1.44
SS18-223ENST00000583595 TMEM169Q96HH4 297 aa6.04□□□□□ -1.44
SS18-223ENST00000583595 FCRL2Q96LA5 508 aaPredicted RBP6.04□□□□□ -1.44
SS18-223ENST00000583595 HERPUD2Q9BSE4 406 aa6.04□□□□□ -1.44
SS18-223ENST00000583595 JAM3Q9BX67 310 aa6.04□□□□□ -1.44
SS18-223ENST00000583595 CD320Q9NPF0 282 aa6.04□□□□□ -1.44
SS18-223ENST00000583595 TOMM22Q9NS69 142 aa6.04□□□□□ -1.44
SS18-223ENST00000583595 MAP3K20Q9NYL2 800 aaKnown RBP6.04□□□□□ -1.44
SS18-223ENST00000583595 BCCIPQ9P287 314 aaKnown RBP eCLIP6.04□□□□□ -1.44
SS18-223ENST00000583595 TNFRSF10DQ9UBN6 386 aa6.04□□□□□ -1.44
SS18-223ENST00000583595 FBXL7Q9UJT9 491 aa6.04□□□□□ -1.44
SS18-223ENST00000583595 FBXO9Q9UK97 447 aaPredicted RBP6.04□□□□□ -1.44
SS18-223ENST00000583595 SMG5Q9UPR3 1016 aaKnown RBP6.04□□□□□ -1.44
SS18-223ENST00000583595 SPO11Q9Y5K1 396 aa6.04□□□□□ -1.44
SS18-223ENST00000583595 OR14I1A6ND48 311 aa6.03□□□□□ -1.44
SS18-223ENST00000583595 FADS2P1A8MWK0 482 aa6.03□□□□□ -1.44
SS18-223ENST00000583595 H7C1D1 291 aa6.03□□□□□ -1.44
SS18-223ENST00000583595 PEX10O60683 326 aa6.03□□□□□ -1.44
SS18-223ENST00000583595 POU2F2P09086 479 aa6.03□□□□□ -1.44
SS18-223ENST00000583595 BDNFP23560 247 aa6.03□□□□□ -1.44
SS18-223ENST00000583595 GJA9P57773 515 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms