RNA–Protein interactions for RNA: ENST00000583463.5

SPECC1-220, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 4

Gene SPECC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-220ENST00000583463 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.47■□□□□ 0.39
SPECC1-220ENST00000583463 AFG1LQ8WV93 481 aa17.47■□□□□ 0.39
SPECC1-220ENST00000583463 HAS1Q92839 578 aa17.47■□□□□ 0.39
SPECC1-220ENST00000583463 TNPO1Q92973 898 aaKnown RBP17.47■□□□□ 0.39
SPECC1-220ENST00000583463 SDF4Q9BRK5 362 aa17.47■□□□□ 0.39
SPECC1-220ENST00000583463 ZBED2Q9BTP6 218 aa17.47■□□□□ 0.39
SPECC1-220ENST00000583463 OSBPL7Q9BZF2 842 aa17.47■□□□□ 0.39
SPECC1-220ENST00000583463 TBC1D22BQ9NU19 505 aa17.47■□□□□ 0.39
SPECC1-220ENST00000583463 TFIP11Q9UBB9 837 aaKnown RBP17.47■□□□□ 0.39
SPECC1-220ENST00000583463 TCEAL9Q9UHQ7 104 aa17.47■□□□□ 0.39
SPECC1-220ENST00000583463 H3BQ06 376 aaPredicted RBP17.46■□□□□ 0.39
SPECC1-220ENST00000583463 ATP9AO75110 1047 aa17.46■□□□□ 0.39
SPECC1-220ENST00000583463 PSMD10O75832 226 aa17.46■□□□□ 0.39
SPECC1-220ENST00000583463 GGPS1O95749 300 aa17.46■□□□□ 0.39
SPECC1-220ENST00000583463 GH1P01241 217 aa17.46■□□□□ 0.39
SPECC1-220ENST00000583463 SSTR3P32745 418 aaPredicted RBP17.46■□□□□ 0.39
SPECC1-220ENST00000583463 KCNJ6P48051 423 aa17.46■□□□□ 0.39
SPECC1-220ENST00000583463 SP2Q02086 613 aa17.46■□□□□ 0.39
SPECC1-220ENST00000583463 MBTPS1Q14703 1052 aa17.46■□□□□ 0.39
SPECC1-220ENST00000583463 SLC39A14Q15043 492 aa17.46■□□□□ 0.39
SPECC1-220ENST00000583463 ARL6IP4Q66PJ3 421 aaKnown RBP17.46■□□□□ 0.39
SPECC1-220ENST00000583463 TRAF7Q6Q0C0 670 aa17.46■□□□□ 0.39
SPECC1-220ENST00000583463 METTL7BQ6UX53 244 aa17.46■□□□□ 0.39
SPECC1-220ENST00000583463 LINC00301Q8NCQ3 95 aa17.46■□□□□ 0.39
SPECC1-220ENST00000583463 CHAMP1Q96JM3 812 aa17.46■□□□□ 0.39
SPECC1-220ENST00000583463 PHOX2BQ99453 314 aa17.46■□□□□ 0.39
SPECC1-220ENST00000583463 TEKT3Q9BXF9 490 aa17.46■□□□□ 0.39
SPECC1-220ENST00000583463 JPH1Q9HDC5 661 aaPredicted RBP17.46■□□□□ 0.39
SPECC1-220ENST00000583463 NOD1Q9Y239 953 aa17.46■□□□□ 0.39
SPECC1-220ENST00000583463 PRR33A8MZF0 331 aa17.45■□□□□ 0.38
SPECC1-220ENST00000583463 DHX15O43143 795 aaKnown RBP17.45■□□□□ 0.38
SPECC1-220ENST00000583463 BAIAP3O94812 1187 aa17.45■□□□□ 0.38
SPECC1-220ENST00000583463 GJB5O95377 273 aa17.45■□□□□ 0.38
SPECC1-220ENST00000583463 ERVK-21P61565 698 aa17.45■□□□□ 0.38
SPECC1-220ENST00000583463 BFSP2Q13515 415 aa17.45■□□□□ 0.38
SPECC1-220ENST00000583463 TMEM266Q2M3C6 531 aa17.45■□□□□ 0.38
SPECC1-220ENST00000583463 LEXMQ3ZCV2 418 aa17.45■□□□□ 0.38
SPECC1-220ENST00000583463 CELF3Q5SZQ8 465 aaKnown RBP17.45■□□□□ 0.38
SPECC1-220ENST00000583463 PTCRAQ6ISU1 281 aaPredicted RBP17.45■□□□□ 0.38
SPECC1-220ENST00000583463 LRRC8DQ7L1W4 858 aa17.45■□□□□ 0.38
SPECC1-220ENST00000583463 DHX37Q8IY37 1157 aaKnown RBP17.45■□□□□ 0.38
SPECC1-220ENST00000583463 KCNG4Q8TDN1 519 aa17.45■□□□□ 0.38
SPECC1-220ENST00000583463 GJA10Q969M2 543 aa17.45■□□□□ 0.38
SPECC1-220ENST00000583463 EMID1Q96A84 441 aaPredicted RBP17.45■□□□□ 0.38
SPECC1-220ENST00000583463 SCAND2PQ9GZW5 306 aaPredicted RBP17.45■□□□□ 0.38
SPECC1-220ENST00000583463 VAV3Q9UKW4 847 aa17.45■□□□□ 0.38
SPECC1-220ENST00000583463 DOCK5Q9H7D0 1870 aa17.45■□□□□ 0.38
SPECC1-220ENST00000583463 ZNF318Q5VUA4 2279 aa17.45■□□□□ 0.38
SPECC1-220ENST00000583463 PIEZO1Q92508 2521 aa17.44■□□□□ 0.38
SPECC1-220ENST00000583463 SPTLC2O15270 562 aa17.44■□□□□ 0.38
SPECC1-220ENST00000583463 CKBP12277 381 aa17.44■□□□□ 0.38
SPECC1-220ENST00000583463 TXKP42681 527 aa17.44■□□□□ 0.38
SPECC1-220ENST00000583463 KRT76Q01546 638 aa17.44■□□□□ 0.38
SPECC1-220ENST00000583463 NHLH1Q02575 133 aa17.44■□□□□ 0.38
SPECC1-220ENST00000583463 ARHGAP1Q07960 439 aa17.44■□□□□ 0.38
SPECC1-220ENST00000583463 CYFIP1Q7L576 1253 aa17.44■□□□□ 0.38
SPECC1-220ENST00000583463 SPATA32Q96LK8 384 aa17.44■□□□□ 0.38
SPECC1-220ENST00000583463 FBXL18Q96ME1 805 aa17.44■□□□□ 0.38
SPECC1-220ENST00000583463 TTC12Q9H892 705 aaPredicted RBP17.44■□□□□ 0.38
SPECC1-220ENST00000583463 MLXIPQ9HAP2 919 aa17.44■□□□□ 0.38
SPECC1-220ENST00000583463 HDAC6Q9UBN7 1215 aa17.44■□□□□ 0.38
SPECC1-220ENST00000583463 SLC9A2Q9UBY0 812 aa17.44■□□□□ 0.38
SPECC1-220ENST00000583463 PCDHA12Q9UN75 941 aa17.44■□□□□ 0.38
SPECC1-220ENST00000583463 DDX39AO00148 427 aaKnown RBP17.43■□□□□ 0.38
SPECC1-220ENST00000583463 SORBS3O60504 671 aa17.43■□□□□ 0.38
SPECC1-220ENST00000583463 PPP6R2O75170 966 aa17.43■□□□□ 0.38
SPECC1-220ENST00000583463 MMP3P08254 477 aa17.43■□□□□ 0.38
SPECC1-220ENST00000583463 SELPP16109 830 aa17.43■□□□□ 0.38
SPECC1-220ENST00000583463 FXR2P51116 673 aaKnown RBP eCLIP17.43■□□□□ 0.38
SPECC1-220ENST00000583463 PPP2R5CQ13362 524 aa17.43■□□□□ 0.38
SPECC1-220ENST00000583463 LAMC2Q13753 1193 aa17.43■□□□□ 0.38
SPECC1-220ENST00000583463 ZNF746Q6NUN9 644 aaPredicted RBP17.43■□□□□ 0.38
SPECC1-220ENST00000583463 DTHD1Q6ZMT9 781 aa17.43■□□□□ 0.38
SPECC1-220ENST00000583463 LEO1Q8WVC0 666 aaPredicted RBP17.43■□□□□ 0.38
SPECC1-220ENST00000583463 TGS1Q96RS0 853 aaKnown RBP17.43■□□□□ 0.38
SPECC1-220ENST00000583463 RAB34Q9BZG1 259 aa17.43■□□□□ 0.38
SPECC1-220ENST00000583463 FBXO2Q9UK22 296 aaPredicted RBP17.43■□□□□ 0.38
SPECC1-220ENST00000583463 RCOR1Q9UKL0 485 aa17.43■□□□□ 0.38
SPECC1-220ENST00000583463 TCHHQ07283 1943 aa17.43■□□□□ 0.38
SPECC1-220ENST00000583463 GRXCR2A6NFK2 248 aa17.42■□□□□ 0.38
SPECC1-220ENST00000583463 NOP56O00567 594 aaKnown RBP17.42■□□□□ 0.38
SPECC1-220ENST00000583463 CHMP2AO43633 222 aa17.42■□□□□ 0.38
SPECC1-220ENST00000583463 CCNE2O96020 404 aa17.42■□□□□ 0.38
SPECC1-220ENST00000583463 CXCL10P02778 98 aa17.42■□□□□ 0.38
SPECC1-220ENST00000583463 MARCKSP29966 332 aaPredicted RBP17.42■□□□□ 0.38
SPECC1-220ENST00000583463 JAK3P52333 1124 aa17.42■□□□□ 0.38
SPECC1-220ENST00000583463 PTPN11Q06124 597 aaPredicted RBP17.42■□□□□ 0.38
SPECC1-220ENST00000583463 SPIRE1Q08AE8 756 aa17.42■□□□□ 0.38
SPECC1-220ENST00000583463 TRIM71Q2Q1W2 868 aaKnown RBP17.42■□□□□ 0.38
SPECC1-220ENST00000583463 ZNF618Q5T7W0 954 aa17.42■□□□□ 0.38
SPECC1-220ENST00000583463 CNKSR3Q6P9H4 555 aa17.42■□□□□ 0.38
SPECC1-220ENST00000583463 B3GNT9Q6UX72 402 aa17.42■□□□□ 0.38
SPECC1-220ENST00000583463 SMAP1Q8IYB5 467 aaPredicted RBP17.42■□□□□ 0.38
SPECC1-220ENST00000583463 KRI1Q8N9T8 703 aaKnown RBP17.42■□□□□ 0.38
SPECC1-220ENST00000583463 PPTC7Q8NI37 304 aa17.42■□□□□ 0.38
SPECC1-220ENST00000583463 AFAP1L1Q8TED9 768 aa17.42■□□□□ 0.38
SPECC1-220ENST00000583463 SPATA33Q96N06 139 aa17.42■□□□□ 0.38
SPECC1-220ENST00000583463 RAD9AQ99638 391 aa17.42■□□□□ 0.38
SPECC1-220ENST00000583463 UNC45AQ9H3U1 944 aa17.42■□□□□ 0.38
SPECC1-220ENST00000583463 BCAS3Q9H6U6 928 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms