RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 CDSNQ15517 529 aa6.09□□□□□ -1.43
COPS3-217ENST00000583160 ARHGAP44Q17R89 818 aa6.09□□□□□ -1.43
COPS3-217ENST00000583160 RNF151Q2KHN1 245 aa6.09□□□□□ -1.43
COPS3-217ENST00000583160 KANK2Q63ZY3 851 aa6.09□□□□□ -1.43
COPS3-217ENST00000583160 TCTN3Q6NUS6 607 aa6.09□□□□□ -1.43
COPS3-217ENST00000583160 LARP4Q71RC2 724 aaKnown RBP eCLIP6.09□□□□□ -1.43
COPS3-217ENST00000583160 OTOP1Q7RTM1 612 aa6.09□□□□□ -1.43
COPS3-217ENST00000583160 OTOP2Q7RTS6 562 aa6.09□□□□□ -1.43
COPS3-217ENST00000583160 TAX1BP1Q86VP1 789 aa6.09□□□□□ -1.43
COPS3-217ENST00000583160 GIMAP8Q8ND71 665 aaPredicted RBP6.09□□□□□ -1.43
COPS3-217ENST00000583160 SH3TC2Q8TF17 1288 aa6.09□□□□□ -1.43
COPS3-217ENST00000583160 ERCC4Q92889 916 aaPredicted RBP6.09□□□□□ -1.43
COPS3-217ENST00000583160 WWC2-AS2Q96NR7 200 aa6.09□□□□□ -1.43
COPS3-217ENST00000583160 BOCQ9BWV1 1114 aa6.09□□□□□ -1.43
COPS3-217ENST00000583160 OR10A5Q9H207 317 aa6.09□□□□□ -1.43
COPS3-217ENST00000583160 TCAF1Q9Y4C2 921 aa6.09□□□□□ -1.43
COPS3-217ENST00000583160 A0A0G2JNJ9 132 aa6.08□□□□□ -1.44
COPS3-217ENST00000583160 B4E1Z4 1266 aa6.08□□□□□ -1.44
COPS3-217ENST00000583160 FOXS1O43638 330 aa6.08□□□□□ -1.44
COPS3-217ENST00000583160 KRT37O76014 449 aa6.08□□□□□ -1.44
COPS3-217ENST00000583160 HMGCRP04035 888 aa6.08□□□□□ -1.44
COPS3-217ENST00000583160 ASLP04424 464 aa6.08□□□□□ -1.44
COPS3-217ENST00000583160 IGFALSP35858 605 aa6.08□□□□□ -1.44
COPS3-217ENST00000583160 MECP2P51608 486 aaKnown RBP6.08□□□□□ -1.44
COPS3-217ENST00000583160 MOGSQ13724 837 aa6.08□□□□□ -1.44
COPS3-217ENST00000583160 CCDC144BQ3MJ40 725 aa6.08□□□□□ -1.44
COPS3-217ENST00000583160 CATSPEREQ5SY80 951 aa6.08□□□□□ -1.44
COPS3-217ENST00000583160 ZCCHC8Q6NZY4 707 aaKnown RBP6.08□□□□□ -1.44
COPS3-217ENST00000583160 CALML6Q8TD86 181 aa6.08□□□□□ -1.44
COPS3-217ENST00000583160 SH3RF3Q8TEJ3 882 aaPredicted RBP6.08□□□□□ -1.44
COPS3-217ENST00000583160 CDK5RAP1Q96SZ6 601 aaKnown RBP6.08□□□□□ -1.44
COPS3-217ENST00000583160 KRTAP4-5Q9BYR2 181 aa6.08□□□□□ -1.44
COPS3-217ENST00000583160 SAMD15Q9P1V8 674 aa6.08□□□□□ -1.44
COPS3-217ENST00000583160 Q9UFV3 132 aa6.08□□□□□ -1.44
COPS3-217ENST00000583160 ZFR2Q9UPR6 939 aaKnown RBP6.08□□□□□ -1.44
COPS3-217ENST00000583160 TSC22D4Q9Y3Q8 395 aa6.08□□□□□ -1.44
COPS3-217ENST00000583160 PPP1R12AO14974 1030 aaPredicted RBP6.07□□□□□ -1.44
COPS3-217ENST00000583160 MATN3O15232 486 aa6.07□□□□□ -1.44
COPS3-217ENST00000583160 OPA1O60313 960 aa6.07□□□□□ -1.44
COPS3-217ENST00000583160 DNAJC8O75937 253 aaPredicted RBP6.07□□□□□ -1.44
COPS3-217ENST00000583160 GLRX3O76003 335 aaKnown RBP6.07□□□□□ -1.44
COPS3-217ENST00000583160 TNFRSF1AP19438 455 aa6.07□□□□□ -1.44
COPS3-217ENST00000583160 TBR1Q16650 682 aa6.07□□□□□ -1.44
COPS3-217ENST00000583160 TMEM200BQ69YZ2 307 aa6.07□□□□□ -1.44
COPS3-217ENST00000583160 GRAMD4Q6IC98 578 aa6.07□□□□□ -1.44
COPS3-217ENST00000583160 CC2D1AQ6P1N0 951 aaPredicted RBP6.07□□□□□ -1.44
COPS3-217ENST00000583160 UBXN4Q92575 508 aa6.07□□□□□ -1.44
COPS3-217ENST00000583160 KIAA1683Q9H0B3 1180 aa6.07□□□□□ -1.44
COPS3-217ENST00000583160 NR2E1Q9Y466 385 aa6.07□□□□□ -1.44
COPS3-217ENST00000583160 TNPO3Q9Y5L0 923 aaKnown RBP6.07□□□□□ -1.44
COPS3-217ENST00000583160 CR2P20023 1033 aa6.06□□□□□ -1.44
COPS3-217ENST00000583160 SELENOPP49908 381 aa6.06□□□□□ -1.44
COPS3-217ENST00000583160 PCOLCEQ15113 449 aa6.06□□□□□ -1.44
COPS3-217ENST00000583160 TRIM68Q6AZZ1 485 aa6.06□□□□□ -1.44
COPS3-217ENST00000583160 SPRED1Q7Z699 444 aa6.06□□□□□ -1.44
COPS3-217ENST00000583160 PALM2Q8IXS6 379 aa6.06□□□□□ -1.44
COPS3-217ENST00000583160 TRAF5O00463 557 aa6.05□□□□□ -1.44
COPS3-217ENST00000583160 ARHGAP6O43182 974 aa6.05□□□□□ -1.44
COPS3-217ENST00000583160 ASMTLO95671 621 aa6.05□□□□□ -1.44
COPS3-217ENST00000583160 SDSP20132 328 aa6.05□□□□□ -1.44
COPS3-217ENST00000583160 APEX1P27695 318 aaKnown RBP6.05□□□□□ -1.44
COPS3-217ENST00000583160 MEOX1P50221 254 aa6.05□□□□□ -1.44
COPS3-217ENST00000583160 KIF11P52732 1056 aa6.05□□□□□ -1.44
COPS3-217ENST00000583160 NFYCQ13952 458 aa6.05□□□□□ -1.44
COPS3-217ENST00000583160 ZNF460Q14592 562 aa6.05□□□□□ -1.44
COPS3-217ENST00000583160 HS1BP3Q53T59 392 aa6.05□□□□□ -1.44
COPS3-217ENST00000583160 AGBL4Q5VU57 503 aa6.05□□□□□ -1.44
COPS3-217ENST00000583160 USP30Q70CQ3 517 aa6.05□□□□□ -1.44
COPS3-217ENST00000583160 FILIP1Q7Z7B0 1213 aa6.05□□□□□ -1.44
COPS3-217ENST00000583160 RTN4RL1Q86UN2 441 aaPredicted RBP6.05□□□□□ -1.44
COPS3-217ENST00000583160 RTKN2Q8IZC4 609 aa6.05□□□□□ -1.44
COPS3-217ENST00000583160 CHST14Q8NCH0 376 aa6.05□□□□□ -1.44
COPS3-217ENST00000583160 FOXRED1Q96CU9 486 aaPredicted RBP6.05□□□□□ -1.44
COPS3-217ENST00000583160 DPYSL5Q9BPU6 564 aa6.05□□□□□ -1.44
COPS3-217ENST00000583160 C12orf65Q9H3J6 166 aaKnown RBP6.05□□□□□ -1.44
COPS3-217ENST00000583160 SEMA4AQ9H3S1 761 aa6.05□□□□□ -1.44
COPS3-217ENST00000583160 TMPRSS5Q9H3S3 457 aa6.05□□□□□ -1.44
COPS3-217ENST00000583160 TMEM260Q9NX78 707 aa6.05□□□□□ -1.44
COPS3-217ENST00000583160 OAZ3Q9UMX2 235 aa6.05□□□□□ -1.44
COPS3-217ENST00000583160 PTPDC1A2A3K4 754 aa6.04□□□□□ -1.44
COPS3-217ENST00000583160 MATN2O00339 956 aa6.04□□□□□ -1.44
COPS3-217ENST00000583160 DVL2O14641 736 aa6.04□□□□□ -1.44
COPS3-217ENST00000583160 MUSKO15146 869 aa6.04□□□□□ -1.44
COPS3-217ENST00000583160 CDC14BO60729 498 aa6.04□□□□□ -1.44
COPS3-217ENST00000583160 MRE11P49959 708 aa6.04□□□□□ -1.44
COPS3-217ENST00000583160 STAT5BP51692 787 aa6.04□□□□□ -1.44
COPS3-217ENST00000583160 ALDH6A1Q02252 535 aaKnown RBP6.04□□□□□ -1.44
COPS3-217ENST00000583160 R3HDM1Q15032 1099 aaKnown RBP6.04□□□□□ -1.44
COPS3-217ENST00000583160 PIK3R6Q5UE93 754 aa6.04□□□□□ -1.44
COPS3-217ENST00000583160 FUKQ8N0W3 1084 aa6.04□□□□□ -1.44
COPS3-217ENST00000583160 PIF1Q9H611 641 aa6.04□□□□□ -1.44
COPS3-217ENST00000583160 CABP5Q9NP86 173 aa6.04□□□□□ -1.44
COPS3-217ENST00000583160 PUF60Q9UHX1 559 aaKnown RBP6.04□□□□□ -1.44
COPS3-217ENST00000583160 TESMINQ9Y4I5 508 aa6.04□□□□□ -1.44
COPS3-217ENST00000583160 JMJD7P0C870 316 aa6.03□□□□□ -1.44
COPS3-217ENST00000583160 FLT3P36888 993 aa6.03□□□□□ -1.44
COPS3-217ENST00000583160 RANGAP1P46060 587 aaPredicted RBP6.03□□□□□ -1.44
COPS3-217ENST00000583160 FNTBP49356 437 aa6.03□□□□□ -1.44
COPS3-217ENST00000583160 ZXDAP98168 799 aa6.03□□□□□ -1.44
COPS3-217ENST00000583160 PABPC4Q13310 644 aaKnown RBP eCLIP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms