RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 INPP4AQ96PE3 977 aaPredicted RBP8.79□□□□□ -1
CCDC47-205ENST00000582331 SENP7Q9BQF6 1050 aa8.79□□□□□ -1
CCDC47-205ENST00000582331 APOL5Q9BWW9 433 aa8.79□□□□□ -1
CCDC47-205ENST00000582331 TSHZ2Q9NRE2 1034 aa8.79□□□□□ -1
CCDC47-205ENST00000582331 ERAP1Q9NZ08 941 aa8.79□□□□□ -1
CCDC47-205ENST00000582331 ZSWIM5Q9P217 1185 aa8.79□□□□□ -1
CCDC47-205ENST00000582331 TUBE1Q9UJT0 475 aa8.79□□□□□ -1
CCDC47-205ENST00000582331 PADI3Q9ULW8 664 aa8.79□□□□□ -1
CCDC47-205ENST00000582331 TELO2Q9Y4R8 837 aa8.79□□□□□ -1
CCDC47-205ENST00000582331 PCDHB7Q9Y5E2 793 aa8.79□□□□□ -1
CCDC47-205ENST00000582331 SPTBN4Q9H254 2564 aa8.79□□□□□ -1
CCDC47-205ENST00000582331 PTPRZ1P23471 2315 aaPredicted RBP8.79□□□□□ -1
CCDC47-205ENST00000582331 KIAA1671Q9BY89 1806 aa8.78□□□□□ -1
CCDC47-205ENST00000582331 MBLAC1A4D2B0 266 aaPredicted RBP8.78□□□□□ -1
CCDC47-205ENST00000582331 M0QZ92 97 aa8.78□□□□□ -1
CCDC47-205ENST00000582331 BRD1O95696 1058 aa8.78□□□□□ -1
CCDC47-205ENST00000582331 HOXB8P17481 243 aaPredicted RBP8.78□□□□□ -1
CCDC47-205ENST00000582331 IBSPP21815 317 aaPredicted RBP8.78□□□□□ -1
CCDC47-205ENST00000582331 MARK3P27448 753 aa8.78□□□□□ -1
CCDC47-205ENST00000582331 TCF7P36402 384 aaPredicted RBP8.78□□□□□ -1
CCDC47-205ENST00000582331 CLCN5P51795 746 aa8.78□□□□□ -1
CCDC47-205ENST00000582331 MFAP1P55081 439 aaKnown RBP8.78□□□□□ -1
CCDC47-205ENST00000582331 IGBP1P78318 339 aa8.78□□□□□ -1
CCDC47-205ENST00000582331 PAK2Q13177 524 aa8.78□□□□□ -1
CCDC47-205ENST00000582331 NMIQ13287 307 aaPredicted RBP8.78□□□□□ -1
CCDC47-205ENST00000582331 KCNC3Q14003 757 aa8.78□□□□□ -1
CCDC47-205ENST00000582331 MARCH8Q5T0T0 291 aa8.78□□□□□ -1
CCDC47-205ENST00000582331 HOMER1Q86YM7 354 aa8.78□□□□□ -1
CCDC47-205ENST00000582331 RASGRP4Q8TDF6 673 aa8.78□□□□□ -1
CCDC47-205ENST00000582331 FAM49AQ9H0Q0 323 aaPredicted RBP8.78□□□□□ -1
CCDC47-205ENST00000582331 MFSD1Q9H3U5 465 aa8.78□□□□□ -1
CCDC47-205ENST00000582331 TMEM260Q9NX78 707 aa8.78□□□□□ -1
CCDC47-205ENST00000582331 RCAN3Q9UKA8 241 aa8.78□□□□□ -1
CCDC47-205ENST00000582331 TRPV2Q9Y5S1 764 aa8.78□□□□□ -1
CCDC47-205ENST00000582331 SALL3Q9BXA9 1300 aa8.78□□□□□ -1
CCDC47-205ENST00000582331 CACNA1HO95180 2353 aa8.77□□□□□ -1.01
CCDC47-205ENST00000582331 PLXNA4Q9HCM2 1894 aa8.77□□□□□ -1.01
CCDC47-205ENST00000582331 KAT6AQ92794 2004 aa8.77□□□□□ -1.01
CCDC47-205ENST00000582331 PALM3A6NDB9 673 aaPredicted RBP8.77□□□□□ -1.01
CCDC47-205ENST00000582331 RRN3P2A6NIE6 340 aa8.77□□□□□ -1.01
CCDC47-205ENST00000582331 FSCN2O14926 492 aa8.77□□□□□ -1.01
CCDC47-205ENST00000582331 SARSP49591 514 aaKnown RBP8.77□□□□□ -1.01
CCDC47-205ENST00000582331 TMEM62Q0P6H9 643 aa8.77□□□□□ -1.01
CCDC47-205ENST00000582331 TPRNQ4KMQ1 711 aa8.77□□□□□ -1.01
CCDC47-205ENST00000582331 IFIT1BQ5T764 474 aaKnown RBP8.77□□□□□ -1.01
CCDC47-205ENST00000582331 PLPP4Q5VZY2 271 aa8.77□□□□□ -1.01
CCDC47-205ENST00000582331 CES5AQ6NT32 575 aa8.77□□□□□ -1.01
CCDC47-205ENST00000582331 LLGL2Q6P1M3 1020 aa8.77□□□□□ -1.01
CCDC47-205ENST00000582331 NLRX1Q86UT6 975 aa8.77□□□□□ -1.01
CCDC47-205ENST00000582331 THNSL1Q8IYQ7 743 aa8.77□□□□□ -1.01
CCDC47-205ENST00000582331 SEPT1Q8WYJ6 367 aa8.77□□□□□ -1.01
CCDC47-205ENST00000582331 GLG1Q92896 1179 aa8.77□□□□□ -1.01
CCDC47-205ENST00000582331 KCTD12Q96CX2 325 aaKnown RBP8.77□□□□□ -1.01
CCDC47-205ENST00000582331 NECTIN4Q96NY8 510 aa8.77□□□□□ -1.01
CCDC47-205ENST00000582331 PIGSQ96S52 555 aa8.77□□□□□ -1.01
CCDC47-205ENST00000582331 UBAC1Q9BSL1 405 aa8.77□□□□□ -1.01
CCDC47-205ENST00000582331 CELF4Q9BZC1 486 aaKnown RBP8.77□□□□□ -1.01
CCDC47-205ENST00000582331 SMARCAD1Q9H4L7 1026 aa8.77□□□□□ -1.01
CCDC47-205ENST00000582331 PUF60Q9UHX1 559 aaKnown RBP8.77□□□□□ -1.01
CCDC47-205ENST00000582331 MAD2L2Q9UI95 211 aa8.77□□□□□ -1.01
CCDC47-205ENST00000582331 FRMPD4Q14CM0 1322 aa8.77□□□□□ -1.01
CCDC47-205ENST00000582331 GSTTP1A0A1W2PQM5 241 aa8.76□□□□□ -1.01
CCDC47-205ENST00000582331 TBKBP1A7MCY6 615 aa8.76□□□□□ -1.01
CCDC47-205ENST00000582331 C2CD4DB7Z1M9 353 aa8.76□□□□□ -1.01
CCDC47-205ENST00000582331 INSRRP14616 1297 aa8.76□□□□□ -1.01
CCDC47-205ENST00000582331 APOBRQ0VD83 1088 aa8.76□□□□□ -1.01
CCDC47-205ENST00000582331 NFX1Q12986 1120 aaKnown RBP8.76□□□□□ -1.01
CCDC47-205ENST00000582331 ANKRD45Q5TZF3 282 aa8.76□□□□□ -1.01
CCDC47-205ENST00000582331 PCNX4Q63HM2 1172 aa8.76□□□□□ -1.01
CCDC47-205ENST00000582331 XRRA1Q6P2D8 792 aa8.76□□□□□ -1.01
CCDC47-205ENST00000582331 FAM43BQ6ZT52 329 aaPredicted RBP8.76□□□□□ -1.01
CCDC47-205ENST00000582331 COLGALT1Q8NBJ5 622 aa8.76□□□□□ -1.01
CCDC47-205ENST00000582331 MRPS27Q92552 414 aaKnown RBP8.76□□□□□ -1.01
CCDC47-205ENST00000582331 CASP10Q92851 521 aa8.76□□□□□ -1.01
CCDC47-205ENST00000582331 TNPO1Q92973 898 aaKnown RBP8.76□□□□□ -1.01
CCDC47-205ENST00000582331 ZBTB10Q96DT7 871 aa8.76□□□□□ -1.01
CCDC47-205ENST00000582331 TCF25Q9BQ70 676 aa8.76□□□□□ -1.01
CCDC47-205ENST00000582331 KRT23Q9C075 422 aa8.76□□□□□ -1.01
CCDC47-205ENST00000582331 ADAM7Q9H2U9 754 aa8.76□□□□□ -1.01
CCDC47-205ENST00000582331 TMX1Q9H3N1 280 aa8.76□□□□□ -1.01
CCDC47-205ENST00000582331 SMOC2Q9H3U7 446 aa8.76□□□□□ -1.01
CCDC47-205ENST00000582331 POMKQ9H5K3 350 aa8.76□□□□□ -1.01
CCDC47-205ENST00000582331 RIOX1Q9H6W3 641 aa8.76□□□□□ -1.01
CCDC47-205ENST00000582331 NGRNQ9NPE2 291 aaKnown RBP8.76□□□□□ -1.01
CCDC47-205ENST00000582331 ENTPD7Q9NQZ7 604 aa8.76□□□□□ -1.01
CCDC47-205ENST00000582331 TYW1Q9NV66 732 aaKnown RBP8.76□□□□□ -1.01
CCDC47-205ENST00000582331 LZTS1Q9Y250 596 aa8.76□□□□□ -1.01
CCDC47-205ENST00000582331 PCDHA2Q9Y5H9 948 aa8.76□□□□□ -1.01
CCDC47-205ENST00000582331 DOCK5Q9H7D0 1870 aa8.76□□□□□ -1.01
CCDC47-205ENST00000582331 IGSF9BQ9UPX0 1349 aa8.76□□□□□ -1.01
CCDC47-205ENST00000582331 CACNA1AO00555 2505 aa8.76□□□□□ -1.01
CCDC47-205ENST00000582331 DMDP11532 3685 aa8.75□□□□□ -1.01
CCDC47-205ENST00000582331 PNMA6FA0A0J9YX94 578 aa8.75□□□□□ -1.01
CCDC47-205ENST00000582331 MED19A0JLT2 244 aaPredicted RBP8.75□□□□□ -1.01
CCDC47-205ENST00000582331 GOLGA8CPA6NN73 597 aa8.75□□□□□ -1.01
CCDC47-205ENST00000582331 HIDE1A8MVS5 230 aa8.75□□□□□ -1.01
CCDC47-205ENST00000582331 ATP9AO75110 1047 aa8.75□□□□□ -1.01
CCDC47-205ENST00000582331 ASGR2P07307 311 aa8.75□□□□□ -1.01
CCDC47-205ENST00000582331 LAG3P18627 525 aa8.75□□□□□ -1.01
CCDC47-205ENST00000582331 MTHFRP42898 656 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms