RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	SQOR	Q9Y6N5	450 aa		13.21	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	C5orf42	Q9H799	3197 aa		13.21	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	EVPL	Q92817	2033 aa		13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	CCDC196	A0A1B0GTZ2	297 aa		13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	DENND3	A2RUS2	1198 aa		13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	ZBTB42	B2RXF5	422 aa		13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	RPS6KA5	O75582	802 aa		13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	MMP1	P03956	469 aa		13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	VTN	P04004	478 aa		13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	ITGB1	P05556	798 aa		13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	CYP3A4	P08684	503 aa		13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	STAG3L1	P0CL83	205 aa		13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	IRS1	P35568	1242 aa		13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	PLA2G5	P39877	138 aa		13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	RCAN1	P53805	252 aa		13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	CCT2	P78371	535 aa	Known RBP	13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	CAMK1	Q14012	370 aa		13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	PUS10	Q3MIT2	529 aa	Known RBP	13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	CMTR2	Q8IYT2	770 aa	Known RBP	13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	REXO1	Q8N1G1	1221 aa	Known RBP	13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	CRIPAK	Q8N1N5	446 aa		13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	NME8	Q8N427	588 aa		13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	METTL13	Q8N6R0	699 aa		13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	KLHL23	Q8NBE8	558 aa		13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	CRYGN	Q8WXF5	182 aa		13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	FAM122A	Q96E09	287 aa		13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	OSMR	Q99650	979 aa		13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	ADAM2	Q99965	735 aa		13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	SLC26A6	Q9BXS9	759 aa		13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	ZMYND12	Q9H0C1	365 aa		13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	LMAN2L	Q9H0V9	348 aa		13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	NCOA5	Q9HCD5	579 aa	Known RBP	13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	C6orf50	Q9HD87	102 aa		13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	ERVK-5	Q9HDB9	667 aa		13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	VPS54	Q9P1Q0	977 aa		13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	HCST	Q9UBK5	93 aa		13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	SAMM50	Q9Y512	469 aa		13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	PCDHGC5	Q9Y5F6	944 aa		13.2	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	KDM3A	Q9Y4C1	1321 aa		13.19	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	ESYT2	A0FGR8	921 aa		13.19	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	TBKBP1	A7MCY6	615 aa		13.19	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	PRPF3	O43395	683 aa	Known RBP	13.19	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	GPR37L1	O60883	481 aa		13.19	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	TBX10	O75333	385 aa		13.19	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	C22orf31	O95567	290 aa		13.19	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	RPS6KB1	P23443	525 aa		13.19	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	HSPA4	P34932	840 aa		13.19	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	CLCN3	P51790	818 aa		13.19	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	AKAP17A	Q02040	695 aa	Known RBP	13.19	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	COL19A1	Q14993	1142 aa		13.19	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	CTC1	Q2NKJ3	1217 aa		13.19	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	ZNF484	Q5JVG2	852 aa		13.19	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	SPOUT1	Q5T280	376 aa	Known RBP	13.19	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	ADGRD2	Q7Z7M1	963 aa		13.19	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	TEX2	Q8IWB9	1127 aa		13.19	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	SPPL3	Q8TCT6	385 aa		13.19	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	POF1B	Q8WVV4	589 aa		13.19	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	KCNB2	Q92953	911 aa		13.19	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	ZNF668	Q96K58	619 aa	Predicted RBP	13.19	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	PLVAP	Q9BX97	442 aa		13.19	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	GABBR1	Q9UBS5	961 aa		13.19	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	ST3GAL5	Q9UNP4	418 aa		13.19	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	HCN4	Q9Y3Q4	1203 aa		13.19	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	PCDHB7	Q9Y5E2	793 aa		13.19	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	COL1A2	P08123	1366 aa		13.19	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	PSAP	P07602	524 aa		13.18	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	SARS	P49591	514 aa	Known RBP	13.18	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	NDUFV1	P49821	464 aa		13.18	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	SET	Q01105	290 aa	Predicted RBP	13.18	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	ZP2	Q05996	745 aa		13.18	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	FAM102B	Q5T8I3	360 aa		13.18	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	ZNF746	Q6NUN9	644 aa	Predicted RBP	13.18	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	RBM23	Q86U06	439 aa	Known RBP	13.18	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	FAM228A	Q86W67	206 aa		13.18	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.18	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	BBX	Q8WY36	941 aa	Predicted RBP	13.18	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	P2RX5	Q93086	422 aa		13.18	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	GJA10	Q969M2	543 aa		13.18	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	LARP6	Q9BRS8	491 aa	Known RBP	13.18	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	TBC1D22B	Q9NU19	505 aa		13.18	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	FAM50B	Q9Y247	325 aa		13.18	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	MYH9	P35579	1960 aa	Known RBP	13.18	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	PLXNA4	Q9HCM2	1894 aa		13.17	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	MBTPS2	O43462	519 aa		13.17	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	CHMP2A	O43633	222 aa		13.17	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	NCK2	O43639	380 aa		13.17	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	GPR32	O75388	356 aa		13.17	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	FGFR1	P11362	822 aa		13.17	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	GNA11	P29992	359 aa		13.17	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	NTRK3	Q16288	839 aa		13.17	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	ADHFE1	Q8IWW8	467 aa		13.17	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	LRRC71	Q8N4P6	559 aa		13.17	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	LENG9	Q96B70	501 aa		13.17	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	AKT3	Q9Y243	479 aa		13.17	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	PCDHA10	Q9Y5I2	948 aa		13.17	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.17	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	NID2	Q14112	1375 aa		13.17	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	GPR182	O15218	404 aa		13.16	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	EDIL3	O43854	480 aa		13.16	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	PDIA3	P30101	505 aa	Known RBP	13.16	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms