RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 AARSD1Q9BTE6 412 aaKnown RBP6.96□□□□□ -1.3
SMCHD1-207ENST00000581711 TANGO6Q9C0B7 1094 aa6.96□□□□□ -1.3
SMCHD1-207ENST00000581711 GALNT8Q9NY28 637 aa6.96□□□□□ -1.3
SMCHD1-207ENST00000581711 BLACEA4D250 179 aa6.95□□□□□ -1.3
SMCHD1-207ENST00000581711 SLC26A4O43511 780 aa6.95□□□□□ -1.3
SMCHD1-207ENST00000581711 FGFR1P11362 822 aa6.95□□□□□ -1.3
SMCHD1-207ENST00000581711 BMP5P22003 454 aa6.95□□□□□ -1.3
SMCHD1-207ENST00000581711 MEOX1P50221 254 aa6.95□□□□□ -1.3
SMCHD1-207ENST00000581711 SHCBP1Q8NEM2 672 aa6.95□□□□□ -1.3
SMCHD1-207ENST00000581711 OSBP2Q969R2 916 aa6.95□□□□□ -1.3
SMCHD1-207ENST00000581711 WNK4Q96J92 1243 aa6.95□□□□□ -1.3
SMCHD1-207ENST00000581711 AGO3Q9H9G7 860 aaKnown RBP6.95□□□□□ -1.3
SMCHD1-207ENST00000581711 AOAHP28039 575 aa6.94□□□□□ -1.3
SMCHD1-207ENST00000581711 MC4RP32245 332 aa6.94□□□□□ -1.3
SMCHD1-207ENST00000581711 GJA4P35212 333 aa6.94□□□□□ -1.3
SMCHD1-207ENST00000581711 ARHGAP36Q6ZRI8 547 aa6.94□□□□□ -1.3
SMCHD1-207ENST00000581711 ANKS3Q6ZW76 656 aa6.94□□□□□ -1.3
SMCHD1-207ENST00000581711 RPUSD2Q8IZ73 545 aaKnown RBP6.94□□□□□ -1.3
SMCHD1-207ENST00000581711 RTKN2Q8IZC4 609 aa6.94□□□□□ -1.3
SMCHD1-207ENST00000581711 SGSM3Q96HU1 749 aa6.94□□□□□ -1.3
SMCHD1-207ENST00000581711 ARHGEF4Q9NR80 690 aa6.94□□□□□ -1.3
SMCHD1-207ENST00000581711 A0A0G2JNJ9 132 aa6.93□□□□□ -1.3
SMCHD1-207ENST00000581711 PMS2P1A4D2B8 440 aa6.93□□□□□ -1.3
SMCHD1-207ENST00000581711 TMEM191CA6NGB0 347 aa6.93□□□□□ -1.3
SMCHD1-207ENST00000581711 PABPC1P11940 636 aaKnown RBP6.93□□□□□ -1.3
SMCHD1-207ENST00000581711 IL12RB1P42701 662 aa6.93□□□□□ -1.3
SMCHD1-207ENST00000581711 SLC25A3Q00325 362 aa6.93□□□□□ -1.3
SMCHD1-207ENST00000581711 FSTL1Q12841 308 aa6.93□□□□□ -1.3
SMCHD1-207ENST00000581711 LAIR1Q6GTX8 287 aa6.93□□□□□ -1.3
SMCHD1-207ENST00000581711 BTBD2Q9BX70 525 aa6.93□□□□□ -1.3
SMCHD1-207ENST00000581711 ST7Q9NRC1 585 aa6.93□□□□□ -1.3
SMCHD1-207ENST00000581711 BTBD7Q9P203 1132 aa6.93□□□□□ -1.3
SMCHD1-207ENST00000581711 Q9UFV3 132 aa6.93□□□□□ -1.3
SMCHD1-207ENST00000581711 ATP23Q9Y6H3 246 aa6.93□□□□□ -1.3
SMCHD1-207ENST00000581711 ASXL2Q76L83 1435 aa6.93□□□□□ -1.3
SMCHD1-207ENST00000581711 MAN2B1O00754 1011 aa6.92□□□□□ -1.3
SMCHD1-207ENST00000581711 FBLP22087 321 aaKnown RBP6.92□□□□□ -1.3
SMCHD1-207ENST00000581711 GTF2F1P35269 517 aaKnown RBP eCLIP6.92□□□□□ -1.3
SMCHD1-207ENST00000581711 CD83Q01151 205 aa6.92□□□□□ -1.3
SMCHD1-207ENST00000581711 GPR19Q15760 415 aa6.92□□□□□ -1.3
SMCHD1-207ENST00000581711 KANK2Q63ZY3 851 aa6.92□□□□□ -1.3
SMCHD1-207ENST00000581711 TMEM200BQ69YZ2 307 aa6.92□□□□□ -1.3
SMCHD1-207ENST00000581711 NSMFQ6X4W1 530 aa6.92□□□□□ -1.3
SMCHD1-207ENST00000581711 CELF2-AS1Q8N7Q2 184 aa6.92□□□□□ -1.3
SMCHD1-207ENST00000581711 MPHOSPH9Q99550 1183 aa6.92□□□□□ -1.3
SMCHD1-207ENST00000581711 GPRC5BQ9NZH0 403 aa6.92□□□□□ -1.3
SMCHD1-207ENST00000581711 FAM184BQ9ULE4 1060 aa6.92□□□□□ -1.3
SMCHD1-207ENST00000581711 ATP2B1P20020 1258 aa6.91□□□□□ -1.3
SMCHD1-207ENST00000581711 FIGNQ5HY92 759 aa6.91□□□□□ -1.3
SMCHD1-207ENST00000581711 SH3BP1Q9Y3L3 701 aa6.91□□□□□ -1.3
SMCHD1-207ENST00000581711 PRAMEF25A6NGN4 478 aa6.9□□□□□ -1.3
SMCHD1-207ENST00000581711 KLF4O43474 513 aa6.9□□□□□ -1.3
SMCHD1-207ENST00000581711 MPIG6BO95866 241 aa6.9□□□□□ -1.3
SMCHD1-207ENST00000581711 AMY2AP04746 511 aa6.9□□□□□ -1.3
SMCHD1-207ENST00000581711 AMY2BP19961 511 aa6.9□□□□□ -1.3
SMCHD1-207ENST00000581711 ADRA1BP35368 520 aa6.9□□□□□ -1.3
SMCHD1-207ENST00000581711 IFRD2Q12894 506 aaPredicted RBP6.9□□□□□ -1.3
SMCHD1-207ENST00000581711 RIN1Q13671 783 aa6.9□□□□□ -1.3
SMCHD1-207ENST00000581711 LRCH2Q5VUJ6 765 aa6.9□□□□□ -1.3
SMCHD1-207ENST00000581711 LRSAM1Q6UWE0 723 aa6.9□□□□□ -1.3
SMCHD1-207ENST00000581711 PTRH1Q86Y79 214 aaKnown RBP6.9□□□□□ -1.3
SMCHD1-207ENST00000581711 AMNQ9BXJ7 453 aa6.9□□□□□ -1.3
SMCHD1-207ENST00000581711 WNT9AO14904 365 aa6.89□□□□□ -1.31
SMCHD1-207ENST00000581711 RPS6KA4O75676 772 aa6.89□□□□□ -1.31
SMCHD1-207ENST00000581711 STK10O94804 968 aaKnown RBP6.89□□□□□ -1.31
SMCHD1-207ENST00000581711 C4BPAP04003 597 aaKnown RBP6.89□□□□□ -1.31
SMCHD1-207ENST00000581711 ECE1P42892 770 aa6.89□□□□□ -1.31
SMCHD1-207ENST00000581711 SCNN1GP51170 649 aa6.89□□□□□ -1.31
SMCHD1-207ENST00000581711 STAT5BP51692 787 aa6.89□□□□□ -1.31
SMCHD1-207ENST00000581711 HERVK_113P62684 666 aa6.89□□□□□ -1.31
SMCHD1-207ENST00000581711 PAK1Q13153 545 aa6.89□□□□□ -1.31
SMCHD1-207ENST00000581711 MOGSQ13724 837 aa6.89□□□□□ -1.31
SMCHD1-207ENST00000581711 CCDC142Q17RM4 750 aa6.89□□□□□ -1.31
SMCHD1-207ENST00000581711 Q6ZRM9 215 aa6.89□□□□□ -1.31
SMCHD1-207ENST00000581711 DPH6Q7L8W6 267 aa6.89□□□□□ -1.31
SMCHD1-207ENST00000581711 ANKRD35Q8N283 1001 aa6.89□□□□□ -1.31
SMCHD1-207ENST00000581711 WDR48Q8TAF3 677 aa6.89□□□□□ -1.31
SMCHD1-207ENST00000581711 NAF1Q96HR8 494 aaKnown RBP6.89□□□□□ -1.31
SMCHD1-207ENST00000581711 OR10A5Q9H207 317 aa6.89□□□□□ -1.31
SMCHD1-207ENST00000581711 PPP1R1BQ9UD71 204 aaPredicted RBP6.89□□□□□ -1.31
SMCHD1-207ENST00000581711 R3HCC1Q9Y3T6 440 aaKnown RBP6.89□□□□□ -1.31
SMCHD1-207ENST00000581711 IQCA1LA6NCM1 817 aa6.88□□□□□ -1.31
SMCHD1-207ENST00000581711 SAFB2Q14151 953 aaKnown RBP eCLIP6.88□□□□□ -1.31
SMCHD1-207ENST00000581711 YOD1Q5VVQ6 348 aaPredicted RBP6.88□□□□□ -1.31
SMCHD1-207ENST00000581711 EP400NLQ6ZTU2 488 aa6.88□□□□□ -1.31
SMCHD1-207ENST00000581711 OSTM1Q86WC4 334 aa6.88□□□□□ -1.31
SMCHD1-207ENST00000581711 CATSPERZQ9NTU4 200 aa6.88□□□□□ -1.31
SMCHD1-207ENST00000581711 UCKL1Q9NWZ5 548 aa6.88□□□□□ -1.31
SMCHD1-207ENST00000581711 TRAF6Q9Y4K3 522 aa6.88□□□□□ -1.31
SMCHD1-207ENST00000581711 KRT15P19012 456 aa6.87□□□□□ -1.31
SMCHD1-207ENST00000581711 CNGB1Q14028 1251 aaPredicted RBP6.87□□□□□ -1.31
SMCHD1-207ENST00000581711 GRAMD4Q6IC98 578 aa6.87□□□□□ -1.31
SMCHD1-207ENST00000581711 NRDE2Q9H7Z3 1164 aa6.87□□□□□ -1.31
SMCHD1-207ENST00000581711 TRAV20A0A0B4J274 112 aa6.86□□□□□ -1.31
SMCHD1-207ENST00000581711 A0A1W2PRX2 142 aa6.86□□□□□ -1.31
SMCHD1-207ENST00000581711 PROZP22891 400 aa6.86□□□□□ -1.31
SMCHD1-207ENST00000581711 ATXN1P54253 815 aaKnown RBP6.86□□□□□ -1.31
SMCHD1-207ENST00000581711 TOB2Q14106 344 aaPredicted RBP6.86□□□□□ -1.31
SMCHD1-207ENST00000581711 DDR2Q16832 855 aa6.86□□□□□ -1.31
SMCHD1-207ENST00000581711 RABGGTAQ92696 567 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms