RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 IL17RAQ96F46 866 aa11.03□□□□□ -0.64
TOP3A-211ENST00000581536 SDF4Q9BRK5 362 aa11.03□□□□□ -0.64
TOP3A-211ENST00000581536 SMARCAD1Q9H4L7 1026 aa11.03□□□□□ -0.64
TOP3A-211ENST00000581536 SH3GLB2Q9NR46 395 aa11.03□□□□□ -0.64
TOP3A-211ENST00000581536 ERAP1Q9NZ08 941 aa11.03□□□□□ -0.64
TOP3A-211ENST00000581536 PCDHA4Q9UN74 947 aa11.03□□□□□ -0.64
TOP3A-211ENST00000581536 NFASCO94856 1347 aa11.03□□□□□ -0.64
TOP3A-211ENST00000581536 DDX11L8A8MPP1 907 aa11.02□□□□□ -0.65
TOP3A-211ENST00000581536 IPO5O00410 1097 aaKnown RBP11.02□□□□□ -0.65
TOP3A-211ENST00000581536 ARHGEF15O94989 841 aa11.02□□□□□ -0.65
TOP3A-211ENST00000581536 CHRNA1P02708 482 aa11.02□□□□□ -0.65
TOP3A-211ENST00000581536 PFKMP08237 780 aa11.02□□□□□ -0.65
TOP3A-211ENST00000581536 ACTN1P12814 892 aa11.02□□□□□ -0.65
TOP3A-211ENST00000581536 FDPSP14324 419 aaKnown RBP11.02□□□□□ -0.65
TOP3A-211ENST00000581536 INSRRP14616 1297 aa11.02□□□□□ -0.65
TOP3A-211ENST00000581536 ATP2A2P16615 1042 aaKnown RBP11.02□□□□□ -0.65
TOP3A-211ENST00000581536 CIITAP33076 1130 aa11.02□□□□□ -0.65
TOP3A-211ENST00000581536 STAT5BP51692 787 aa11.02□□□□□ -0.65
TOP3A-211ENST00000581536 DEFB103AP81534 67 aa11.02□□□□□ -0.65
TOP3A-211ENST00000581536 PLCB4Q15147 1175 aa11.02□□□□□ -0.65
TOP3A-211ENST00000581536 GRIK4Q16099 956 aa11.02□□□□□ -0.65
TOP3A-211ENST00000581536 C8orf34Q49A92 452 aa11.02□□□□□ -0.65
TOP3A-211ENST00000581536 SWSAP1Q6NVH7 229 aa11.02□□□□□ -0.65
TOP3A-211ENST00000581536 NIPA1Q7RTP0 329 aa11.02□□□□□ -0.65
TOP3A-211ENST00000581536 TRMT1LQ7Z2T5 733 aaKnown RBP11.02□□□□□ -0.65
TOP3A-211ENST00000581536 TEX2Q8IWB9 1127 aa11.02□□□□□ -0.65
TOP3A-211ENST00000581536 BLIDQ8IZY5 108 aa11.02□□□□□ -0.65
TOP3A-211ENST00000581536 DBF4BQ8NFT6 615 aa11.02□□□□□ -0.65
TOP3A-211ENST00000581536 BICD2Q8TD16 824 aa11.02□□□□□ -0.65
TOP3A-211ENST00000581536 TBCKQ8TEA7 893 aa11.02□□□□□ -0.65
TOP3A-211ENST00000581536 LENG9Q96B70 501 aa11.02□□□□□ -0.65
TOP3A-211ENST00000581536 ZNF577Q9BSK1 485 aa11.02□□□□□ -0.65
TOP3A-211ENST00000581536 CERS4Q9HA82 394 aa11.02□□□□□ -0.65
TOP3A-211ENST00000581536 MSRAQ9UJ68 235 aa11.02□□□□□ -0.65
TOP3A-211ENST00000581536 ZNF215Q9UL58 517 aaPredicted RBP11.02□□□□□ -0.65
TOP3A-211ENST00000581536 IGKV6D-21A0A0A0MT36 114 aa11.01□□□□□ -0.65
TOP3A-211ENST00000581536 RFXAPO00287 272 aa11.01□□□□□ -0.65
TOP3A-211ENST00000581536 MSH4O15457 936 aa11.01□□□□□ -0.65
TOP3A-211ENST00000581536 GNAT1P11488 350 aa11.01□□□□□ -0.65
TOP3A-211ENST00000581536 USP11P51784 963 aa11.01□□□□□ -0.65
TOP3A-211ENST00000581536 WDR5P61964 334 aaKnown RBP11.01□□□□□ -0.65
TOP3A-211ENST00000581536 PPFIA1Q13136 1202 aa11.01□□□□□ -0.65
TOP3A-211ENST00000581536 CNKSR3Q6P9H4 555 aa11.01□□□□□ -0.65
TOP3A-211ENST00000581536 PLPPR4Q7Z2D5 763 aa11.01□□□□□ -0.65
TOP3A-211ENST00000581536 SPRED2Q7Z698 418 aa11.01□□□□□ -0.65
TOP3A-211ENST00000581536 CCDC60Q8IWA6 550 aaPredicted RBP11.01□□□□□ -0.65
TOP3A-211ENST00000581536 CCDC148Q8NFR7 591 aa11.01□□□□□ -0.65
TOP3A-211ENST00000581536 DNAJB3Q8WWF6 145 aa11.01□□□□□ -0.65
TOP3A-211ENST00000581536 KIF2CQ99661 725 aa11.01□□□□□ -0.65
TOP3A-211ENST00000581536 PHF20Q9BVI0 1012 aa11.01□□□□□ -0.65
TOP3A-211ENST00000581536 MTIF3Q9H2K0 278 aaKnown RBP11.01□□□□□ -0.65
TOP3A-211ENST00000581536 PRDM12Q9H4Q4 367 aa11.01□□□□□ -0.65
TOP3A-211ENST00000581536 NRCAMQ92823 1304 aa11.01□□□□□ -0.65
TOP3A-211ENST00000581536 JAK2O60674 1132 aa11□□□□□ -0.65
TOP3A-211ENST00000581536 TDP2O95551 362 aa11□□□□□ -0.65
TOP3A-211ENST00000581536 TMEM62Q0P6H9 643 aa11□□□□□ -0.65
TOP3A-211ENST00000581536 ST3GAL1Q11201 340 aa11□□□□□ -0.65
TOP3A-211ENST00000581536 IKBKEQ14164 716 aa11□□□□□ -0.65
TOP3A-211ENST00000581536 ANKRD1Q15327 319 aa11□□□□□ -0.65
TOP3A-211ENST00000581536 PLEKHG4Q58EX7 1191 aa11□□□□□ -0.65
TOP3A-211ENST00000581536 EARS2Q5JPH6 523 aaKnown RBP11□□□□□ -0.65
TOP3A-211ENST00000581536 FAM26DQ5JW98 314 aa11□□□□□ -0.65
TOP3A-211ENST00000581536 MCTP2Q6DN12 878 aa11□□□□□ -0.65
TOP3A-211ENST00000581536 FAM117BQ6P1L5 589 aa11□□□□□ -0.65
TOP3A-211ENST00000581536 CPLX2Q6PUV4 134 aaKnown RBP11□□□□□ -0.65
TOP3A-211ENST00000581536 HERC6Q8IVU3 1022 aa11□□□□□ -0.65
TOP3A-211ENST00000581536 SLC17A8Q8NDX2 589 aa11□□□□□ -0.65
TOP3A-211ENST00000581536 AZI2Q9H6S1 392 aa11□□□□□ -0.65
TOP3A-211ENST00000581536 SLC28A3Q9HAS3 691 aa11□□□□□ -0.65
TOP3A-211ENST00000581536 ORC3Q9UBD5 711 aaPredicted RBP11□□□□□ -0.65
TOP3A-211ENST00000581536 PCDHA11Q9Y5I1 949 aa11□□□□□ -0.65
TOP3A-211ENST00000581536 EMSYQ7Z589 1322 aa11□□□□□ -0.65
TOP3A-211ENST00000581536 SPTBN5Q9NRC6 3674 aaKnown RBP10.99□□□□□ -0.65
TOP3A-211ENST00000581536 LCHNA4D1U4 455 aa10.99□□□□□ -0.65
TOP3A-211ENST00000581536 MBLAC1A4D2B0 266 aaPredicted RBP10.99□□□□□ -0.65
TOP3A-211ENST00000581536 BACH1O14867 736 aa10.99□□□□□ -0.65
TOP3A-211ENST00000581536 PARNO95453 639 aaKnown RBP10.99□□□□□ -0.65
TOP3A-211ENST00000581536 CA3P07451 260 aa10.99□□□□□ -0.65
TOP3A-211ENST00000581536 KLRC1P26715 233 aa10.99□□□□□ -0.65
TOP3A-211ENST00000581536 MGAT3Q09327 533 aa10.99□□□□□ -0.65
TOP3A-211ENST00000581536 ADGRE1Q14246 886 aa10.99□□□□□ -0.65
TOP3A-211ENST00000581536 RAB30Q15771 203 aa10.99□□□□□ -0.65
TOP3A-211ENST00000581536 INF2Q27J81 1249 aa10.99□□□□□ -0.65
TOP3A-211ENST00000581536 KMT5BQ4FZB7 885 aa10.99□□□□□ -0.65
TOP3A-211ENST00000581536 RDH13Q8NBN7 331 aa10.99□□□□□ -0.65
TOP3A-211ENST00000581536 PHOSPHO2Q8TCD6 241 aa10.99□□□□□ -0.65
TOP3A-211ENST00000581536 GTF3C6Q969F1 213 aa10.99□□□□□ -0.65
TOP3A-211ENST00000581536 FAM49AQ9H0Q0 323 aaPredicted RBP10.99□□□□□ -0.65
TOP3A-211ENST00000581536 ZNF302Q9NR11 478 aa10.99□□□□□ -0.65
TOP3A-211ENST00000581536 TBC1D22BQ9NU19 505 aa10.99□□□□□ -0.65
TOP3A-211ENST00000581536 TUBE1Q9UJT0 475 aa10.99□□□□□ -0.65
TOP3A-211ENST00000581536 TMEM265A0A087WTH1 108 aa10.98□□□□□ -0.65
TOP3A-211ENST00000581536 CYP3A7-CYP3A51PA0A087WV96 503 aa10.98□□□□□ -0.65
TOP3A-211ENST00000581536 ABHD14A-ACY1A0A1B0GW23 586 aa10.98□□□□□ -0.65
TOP3A-211ENST00000581536 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.98□□□□□ -0.65
TOP3A-211ENST00000581536 EPOPA6NHQ4 379 aa10.98□□□□□ -0.65
TOP3A-211ENST00000581536 RRN3P2A6NIE6 340 aa10.98□□□□□ -0.65
TOP3A-211ENST00000581536 ZBTB42B2RXF5 422 aa10.98□□□□□ -0.65
TOP3A-211ENST00000581536 CDKL5O76039 1030 aa10.98□□□□□ -0.65
TOP3A-211ENST00000581536 BAIAP3O94812 1187 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms