RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 CALML6Q8TD86 181 aa6.41□□□□□ -1.38
SMCHD1-204ENST00000581226 ADAMTS17Q8TE56 1095 aa6.41□□□□□ -1.38
SMCHD1-204ENST00000581226 ZCCHC14Q8WYQ9 949 aaKnown RBP6.41□□□□□ -1.38
SMCHD1-204ENST00000581226 E2F7Q96AV8 911 aa6.41□□□□□ -1.38
SMCHD1-204ENST00000581226 SCYL1Q96KG9 808 aa6.41□□□□□ -1.38
SMCHD1-204ENST00000581226 C16orf92Q96LL3 132 aa6.41□□□□□ -1.38
SMCHD1-204ENST00000581226 BTBD2Q9BX70 525 aa6.41□□□□□ -1.38
SMCHD1-204ENST00000581226 KRTAP9-8Q9BYQ0 159 aa6.41□□□□□ -1.38
SMCHD1-204ENST00000581226 FTSJ1Q9UET6 329 aa6.41□□□□□ -1.38
SMCHD1-204ENST00000581226 UBA6A0AVT1 1052 aaPredicted RBP6.4□□□□□ -1.38
SMCHD1-204ENST00000581226 H0Y858 1186 aa6.4□□□□□ -1.38
SMCHD1-204ENST00000581226 ZEB2O60315 1214 aa6.4□□□□□ -1.38
SMCHD1-204ENST00000581226 CPEP16870 476 aa6.4□□□□□ -1.38
SMCHD1-204ENST00000581226 IL13RA1P78552 427 aa6.4□□□□□ -1.38
SMCHD1-204ENST00000581226 SMAD3P84022 425 aaKnown RBP6.4□□□□□ -1.38
SMCHD1-204ENST00000581226 ALDH6A1Q02252 535 aaKnown RBP6.4□□□□□ -1.38
SMCHD1-204ENST00000581226 WDR72Q3MJ13 1102 aa6.4□□□□□ -1.38
SMCHD1-204ENST00000581226 ATP13A4Q4VNC1 1196 aa6.4□□□□□ -1.38
SMCHD1-204ENST00000581226 ESRP1Q6NXG1 681 aaKnown RBP6.4□□□□□ -1.38
SMCHD1-204ENST00000581226 ZZZ3Q8IYH5 903 aa6.4□□□□□ -1.38
SMCHD1-204ENST00000581226 AFAP1L2Q8N4X5 818 aa6.4□□□□□ -1.38
SMCHD1-204ENST00000581226 MARCH10Q8NA82 808 aaPredicted RBP6.4□□□□□ -1.38
SMCHD1-204ENST00000581226 TXNDC5Q8NBS9 432 aaKnown RBP6.4□□□□□ -1.38
SMCHD1-204ENST00000581226 TMEM168Q9H0V1 697 aa6.4□□□□□ -1.38
SMCHD1-204ENST00000581226 EMC7Q9NPA0 242 aa6.4□□□□□ -1.38
SMCHD1-204ENST00000581226 TRIM13O60858 407 aa6.39□□□□□ -1.39
SMCHD1-204ENST00000581226 CD40P25942 277 aa6.39□□□□□ -1.39
SMCHD1-204ENST00000581226 ID4P47928 161 aa6.39□□□□□ -1.39
SMCHD1-204ENST00000581226 SLC6A3Q01959 620 aa6.39□□□□□ -1.39
SMCHD1-204ENST00000581226 ROM1Q03395 351 aa6.39□□□□□ -1.39
SMCHD1-204ENST00000581226 ADCY1Q08828 1119 aa6.39□□□□□ -1.39
SMCHD1-204ENST00000581226 RGL3Q3MIN7 710 aa6.39□□□□□ -1.39
SMCHD1-204ENST00000581226 FAM26FQ5R3K3 315 aa6.39□□□□□ -1.39
SMCHD1-204ENST00000581226 ZNF761Q86XN6 746 aaPredicted RBP6.39□□□□□ -1.39
SMCHD1-204ENST00000581226 SP8Q8IXZ3 490 aa6.39□□□□□ -1.39
SMCHD1-204ENST00000581226 RTF1Q92541 710 aaKnown RBP6.39□□□□□ -1.39
SMCHD1-204ENST00000581226 YTHDC1Q96MU7 727 aaKnown RBP6.39□□□□□ -1.39
SMCHD1-204ENST00000581226 TUBGCP5Q96RT8 1024 aa6.39□□□□□ -1.39
SMCHD1-204ENST00000581226 FOXB1Q99853 325 aa6.39□□□□□ -1.39
SMCHD1-204ENST00000581226 OR10A5Q9H207 317 aa6.39□□□□□ -1.39
SMCHD1-204ENST00000581226 ZMAT4Q9H898 229 aa6.39□□□□□ -1.39
SMCHD1-204ENST00000581226 LUC7LQ9NQ29 371 aaKnown RBP6.39□□□□□ -1.39
SMCHD1-204ENST00000581226 BRINP1O60477 761 aa6.38□□□□□ -1.39
SMCHD1-204ENST00000581226 SASH1O94885 1247 aa6.38□□□□□ -1.39
SMCHD1-204ENST00000581226 KLHL18O94889 574 aa6.38□□□□□ -1.39
SMCHD1-204ENST00000581226 LSP1P33241 339 aa6.38□□□□□ -1.39
SMCHD1-204ENST00000581226 CD83Q01151 205 aa6.38□□□□□ -1.39
SMCHD1-204ENST00000581226 STILQ15468 1287 aa6.38□□□□□ -1.39
SMCHD1-204ENST00000581226 DDB1Q16531 1140 aa6.38□□□□□ -1.39
SMCHD1-204ENST00000581226 TTC38Q5R3I4 469 aa6.38□□□□□ -1.39
SMCHD1-204ENST00000581226 TIGD7Q6NT04 549 aaPredicted RBP6.38□□□□□ -1.39
SMCHD1-204ENST00000581226 CXXC5Q7LFL8 322 aaKnown RBP6.38□□□□□ -1.39
SMCHD1-204ENST00000581226 PHYKPLQ8IUZ5 450 aa6.38□□□□□ -1.39
SMCHD1-204ENST00000581226 C7orf31Q8N865 590 aa6.38□□□□□ -1.39
SMCHD1-204ENST00000581226 SYT8Q8NBV8 401 aa6.38□□□□□ -1.39
SMCHD1-204ENST00000581226 NUDT10Q8NFP7 164 aa6.38□□□□□ -1.39
SMCHD1-204ENST00000581226 ATL2Q8NHH9 583 aa6.38□□□□□ -1.39
SMCHD1-204ENST00000581226 NUDT11Q96G61 164 aa6.38□□□□□ -1.39
SMCHD1-204ENST00000581226 MAML3Q96JK9 1138 aa6.38□□□□□ -1.39
SMCHD1-204ENST00000581226 APOBEC2Q9Y235 224 aaKnown RBP6.38□□□□□ -1.39
SMCHD1-204ENST00000581226 ANKRD62A6NC57 917 aa6.37□□□□□ -1.39
SMCHD1-204ENST00000581226 RAB11FIP3O75154 756 aa6.37□□□□□ -1.39
SMCHD1-204ENST00000581226 APOL3O95236 402 aa6.37□□□□□ -1.39
SMCHD1-204ENST00000581226 PRLP01236 227 aa6.37□□□□□ -1.39
SMCHD1-204ENST00000581226 APEX1P27695 318 aaKnown RBP6.37□□□□□ -1.39
SMCHD1-204ENST00000581226 ADCY8P40145 1251 aa6.37□□□□□ -1.39
SMCHD1-204ENST00000581226 RGS3P49796 1198 aa6.37□□□□□ -1.39
SMCHD1-204ENST00000581226 GJA9P57773 515 aa6.37□□□□□ -1.39
SMCHD1-204ENST00000581226 PHC1P78364 1004 aa6.37□□□□□ -1.39
SMCHD1-204ENST00000581226 LRRC32Q14392 662 aa6.37□□□□□ -1.39
SMCHD1-204ENST00000581226 STAT4Q14765 748 aa6.37□□□□□ -1.39
SMCHD1-204ENST00000581226 TERF2Q15554 542 aa6.37□□□□□ -1.39
SMCHD1-204ENST00000581226 GPR158Q5T848 1215 aa6.37□□□□□ -1.39
SMCHD1-204ENST00000581226 NT5DC1Q5TFE4 455 aa6.37□□□□□ -1.39
SMCHD1-204ENST00000581226 BROXQ5VW32 411 aa6.37□□□□□ -1.39
SMCHD1-204ENST00000581226 PRAMEF9Q5VWM5 478 aa6.37□□□□□ -1.39
SMCHD1-204ENST00000581226 SLFN12LQ6IEE8 588 aa6.37□□□□□ -1.39
SMCHD1-204ENST00000581226 OTOP2Q7RTS6 562 aa6.37□□□□□ -1.39
SMCHD1-204ENST00000581226 ZNF610Q8N9Z0 462 aa6.37□□□□□ -1.39
SMCHD1-204ENST00000581226 FAM126AQ9BYI3 521 aaPredicted RBP6.37□□□□□ -1.39
SMCHD1-204ENST00000581226 ZCCHC4Q9H5U6 513 aa6.37□□□□□ -1.39
SMCHD1-204ENST00000581226 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.36□□□□□ -1.39
SMCHD1-204ENST00000581226 MROH6A6NGR9 719 aa6.36□□□□□ -1.39
SMCHD1-204ENST00000581226 EYA4O95677 639 aa6.36□□□□□ -1.39
SMCHD1-204ENST00000581226 KIAA2012Q0VF49 1180 aa6.36□□□□□ -1.39
SMCHD1-204ENST00000581226 KANK2Q63ZY3 851 aa6.36□□□□□ -1.39
SMCHD1-204ENST00000581226 HDGFL2Q7Z4V5 671 aaPredicted RBP6.36□□□□□ -1.39
SMCHD1-204ENST00000581226 FAM124AQ86V42 546 aa6.36□□□□□ -1.39
SMCHD1-204ENST00000581226 FEZF2Q8TBJ5 459 aa6.36□□□□□ -1.39
SMCHD1-204ENST00000581226 SLC5A5Q92911 643 aa6.36□□□□□ -1.39
SMCHD1-204ENST00000581226 LCORQ96JN0 433 aaPredicted RBP6.36□□□□□ -1.39
SMCHD1-204ENST00000581226 KCNC2Q96PR1 638 aa6.36□□□□□ -1.39
SMCHD1-204ENST00000581226 POFUT1Q9H488 388 aa6.36□□□□□ -1.39
SMCHD1-204ENST00000581226 BARX1Q9HBU1 254 aaPredicted RBP6.36□□□□□ -1.39
SMCHD1-204ENST00000581226 USP40Q9NVE5 1235 aa6.36□□□□□ -1.39
SMCHD1-204ENST00000581226 MSRAQ9UJ68 235 aa6.36□□□□□ -1.39
SMCHD1-204ENST00000581226 ZDHHC9Q9Y397 364 aa6.36□□□□□ -1.39
SMCHD1-204ENST00000581226 C9orf118A6NHY6 69 aa6.35□□□□□ -1.39
SMCHD1-204ENST00000581226 NOBOXO60393 691 aa6.35□□□□□ -1.39
SMCHD1-204ENST00000581226 ULK1O75385 1050 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms