RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 TMTC2Q8N394 836 aa11.35□□□□□ -0.59
RFFL-208ENST00000581039 SRBD1Q8N5C6 995 aaKnown RBP11.35□□□□□ -0.59
RFFL-208ENST00000581039 COLGALT1Q8NBJ5 622 aa11.35□□□□□ -0.59
RFFL-208ENST00000581039 RIPOR3Q96MK2 946 aa11.35□□□□□ -0.59
RFFL-208ENST00000581039 MXRA8Q9BRK3 442 aa11.35□□□□□ -0.59
RFFL-208ENST00000581039 APOL5Q9BWW9 433 aa11.35□□□□□ -0.59
RFFL-208ENST00000581039 S1PR5Q9H228 398 aa11.35□□□□□ -0.59
RFFL-208ENST00000581039 ATP6V0A4Q9HBG4 840 aa11.35□□□□□ -0.59
RFFL-208ENST00000581039 LY9Q9HBG7 655 aa11.35□□□□□ -0.59
RFFL-208ENST00000581039 ERVK-5Q9HDB9 667 aa11.35□□□□□ -0.59
RFFL-208ENST00000581039 NOC2LQ9Y3T9 749 aaKnown RBP11.35□□□□□ -0.59
RFFL-208ENST00000581039 TAF6LQ9Y6J9 622 aa11.35□□□□□ -0.59
RFFL-208ENST00000581039 CCDC69A6NI79 296 aa11.34□□□□□ -0.59
RFFL-208ENST00000581039 H0Y858 1186 aa11.34□□□□□ -0.59
RFFL-208ENST00000581039 FSCN2O14926 492 aa11.34□□□□□ -0.59
RFFL-208ENST00000581039 MGEA5O60502 916 aa11.34□□□□□ -0.59
RFFL-208ENST00000581039 PLEKHA8P1O95397 391 aa11.34□□□□□ -0.59
RFFL-208ENST00000581039 CALM1P0DP23 149 aa11.34□□□□□ -0.59
RFFL-208ENST00000581039 CALM2P0DP24 149 aa11.34□□□□□ -0.59
RFFL-208ENST00000581039 CALM3P0DP25 149 aa11.34□□□□□ -0.59
RFFL-208ENST00000581039 HOXB8P17481 243 aaPredicted RBP11.34□□□□□ -0.59
RFFL-208ENST00000581039 LAG3P18627 525 aa11.34□□□□□ -0.59
RFFL-208ENST00000581039 SLC26A2P50443 739 aa11.34□□□□□ -0.59
RFFL-208ENST00000581039 PLPP4Q5VZY2 271 aa11.34□□□□□ -0.59
RFFL-208ENST00000581039 MB21D2Q8IYB1 491 aaPredicted RBP11.34□□□□□ -0.59
RFFL-208ENST00000581039 CYP2W1Q8TAV3 490 aa11.34□□□□□ -0.59
RFFL-208ENST00000581039 TCF25Q9BQ70 676 aa11.34□□□□□ -0.59
RFFL-208ENST00000581039 TSHZ2Q9NRE2 1034 aa11.34□□□□□ -0.59
RFFL-208ENST00000581039 ST3GAL5Q9UNP4 418 aa11.34□□□□□ -0.59
RFFL-208ENST00000581039 LZTS1Q9Y250 596 aa11.34□□□□□ -0.59
RFFL-208ENST00000581039 NR2E1Q9Y466 385 aa11.34□□□□□ -0.59
RFFL-208ENST00000581039 CACNA1HO95180 2353 aa11.34□□□□□ -0.59
RFFL-208ENST00000581039 NFASCO94856 1347 aa11.34□□□□□ -0.59
RFFL-208ENST00000581039 hCG_1642624A0A1W2PR95 340 aa11.33□□□□□ -0.6
RFFL-208ENST00000581039 C9IYK1 514 aa11.33□□□□□ -0.6
RFFL-208ENST00000581039 BACH1O14867 736 aa11.33□□□□□ -0.6
RFFL-208ENST00000581039 PRC1O43663 620 aa11.33□□□□□ -0.6
RFFL-208ENST00000581039 HBP1O60381 514 aa11.33□□□□□ -0.6
RFFL-208ENST00000581039 SP100P23497 879 aaPredicted RBP11.33□□□□□ -0.6
RFFL-208ENST00000581039 CHMLP26374 656 aa11.33□□□□□ -0.6
RFFL-208ENST00000581039 FAM189BP81408 668 aa11.33□□□□□ -0.6
RFFL-208ENST00000581039 FOXK2Q01167 660 aa11.33□□□□□ -0.6
RFFL-208ENST00000581039 PLCB3Q01970 1234 aa11.33□□□□□ -0.6
RFFL-208ENST00000581039 KRT17Q04695 432 aa11.33□□□□□ -0.6
RFFL-208ENST00000581039 APOBRQ0VD83 1088 aa11.33□□□□□ -0.6
RFFL-208ENST00000581039 KCNC3Q14003 757 aa11.33□□□□□ -0.6
RFFL-208ENST00000581039 FAM160B1Q5W0V3 765 aa11.33□□□□□ -0.6
RFFL-208ENST00000581039 LLGL2Q6P1M3 1020 aa11.33□□□□□ -0.6
RFFL-208ENST00000581039 SYCE2Q6PIF2 218 aa11.33□□□□□ -0.6
RFFL-208ENST00000581039 HEATR3Q7Z4Q2 680 aa11.33□□□□□ -0.6
RFFL-208ENST00000581039 KIAA0319LQ8IZA0 1049 aa11.33□□□□□ -0.6
RFFL-208ENST00000581039 CCDC82Q8N4S0 544 aa11.33□□□□□ -0.6
RFFL-208ENST00000581039 KREMEN2Q8NCW0 462 aa11.33□□□□□ -0.6
RFFL-208ENST00000581039 RASGRP4Q8TDF6 673 aa11.33□□□□□ -0.6
RFFL-208ENST00000581039 MRPS27Q92552 414 aaKnown RBP11.33□□□□□ -0.6
RFFL-208ENST00000581039 MTA3Q9BTC8 594 aa11.33□□□□□ -0.6
RFFL-208ENST00000581039 CWH43Q9H720 699 aa11.33□□□□□ -0.6
RFFL-208ENST00000581039 CDHR5Q9HBB8 845 aa11.33□□□□□ -0.6
RFFL-208ENST00000581039 NGRNQ9NPE2 291 aaKnown RBP11.33□□□□□ -0.6
RFFL-208ENST00000581039 ENTPD7Q9NQZ7 604 aa11.33□□□□□ -0.6
RFFL-208ENST00000581039 TMEM161AQ9NX61 479 aa11.33□□□□□ -0.6
RFFL-208ENST00000581039 PTPRZ1P23471 2315 aaPredicted RBP11.33□□□□□ -0.6
RFFL-208ENST00000581039 USP34Q70CQ2 3546 aa11.32□□□□□ -0.6
RFFL-208ENST00000581039 HIDE1A8MVS5 230 aa11.32□□□□□ -0.6
RFFL-208ENST00000581039 GALR2O43603 387 aaPredicted RBP11.32□□□□□ -0.6
RFFL-208ENST00000581039 ATG7O95352 703 aa11.32□□□□□ -0.6
RFFL-208ENST00000581039 PDGFBP01127 241 aaPredicted RBP11.32□□□□□ -0.6
RFFL-208ENST00000581039 ARP10275 920 aa11.32□□□□□ -0.6
RFFL-208ENST00000581039 FGFR1P11362 822 aa11.32□□□□□ -0.6
RFFL-208ENST00000581039 RXRAP19793 462 aa11.32□□□□□ -0.6
RFFL-208ENST00000581039 PDE4AP27815 886 aa11.32□□□□□ -0.6
RFFL-208ENST00000581039 MCM5P33992 734 aa11.32□□□□□ -0.6
RFFL-208ENST00000581039 CRYBB1P53674 252 aaPredicted RBP11.32□□□□□ -0.6
RFFL-208ENST00000581039 MTMR3Q13615 1198 aa11.32□□□□□ -0.6
RFFL-208ENST00000581039 CEP55Q53EZ4 464 aa11.32□□□□□ -0.6
RFFL-208ENST00000581039 ZNF484Q5JVG2 852 aa11.32□□□□□ -0.6
RFFL-208ENST00000581039 TTC22Q5TAA0 569 aa11.32□□□□□ -0.6
RFFL-208ENST00000581039 CES5AQ6NT32 575 aa11.32□□□□□ -0.6
RFFL-208ENST00000581039 TMC7Q7Z402 723 aa11.32□□□□□ -0.6
RFFL-208ENST00000581039 UBALD2Q8IYN6 164 aa11.32□□□□□ -0.6
RFFL-208ENST00000581039 TMEM40Q8WWA1 233 aa11.32□□□□□ -0.6
RFFL-208ENST00000581039 CASP10Q92851 521 aa11.32□□□□□ -0.6
RFFL-208ENST00000581039 MAP4K1Q92918 833 aa11.32□□□□□ -0.6
RFFL-208ENST00000581039 TMEM87BQ96K49 555 aa11.32□□□□□ -0.6
RFFL-208ENST00000581039 ELAC1Q9H777 363 aaKnown RBP11.32□□□□□ -0.6
RFFL-208ENST00000581039 AGO4Q9HCK5 861 aaKnown RBP11.32□□□□□ -0.6
RFFL-208ENST00000581039 HCSTQ9UBK5 93 aa11.32□□□□□ -0.6
RFFL-208ENST00000581039 SLC12A7Q9Y666 1083 aa11.32□□□□□ -0.6
RFFL-208ENST00000581039 IGKV6D-21A0A0A0MT36 114 aa11.31□□□□□ -0.6
RFFL-208ENST00000581039 PROB1E7EW31 1015 aa11.31□□□□□ -0.6
RFFL-208ENST00000581039 HOXA2O43364 376 aa11.31□□□□□ -0.6
RFFL-208ENST00000581039 FOSP01100 380 aaPredicted RBP11.31□□□□□ -0.6
RFFL-208ENST00000581039 GSPT1P15170 499 aaKnown RBP11.31□□□□□ -0.6
RFFL-208ENST00000581039 PPM1AP35813 382 aa11.31□□□□□ -0.6
RFFL-208ENST00000581039 ZNF76P36508 570 aa11.31□□□□□ -0.6
RFFL-208ENST00000581039 ITGB3BPQ13352 177 aaPredicted RBP11.31□□□□□ -0.6
RFFL-208ENST00000581039 KIZQ2M2Z5 673 aa11.31□□□□□ -0.6
RFFL-208ENST00000581039 TPRNQ4KMQ1 711 aa11.31□□□□□ -0.6
RFFL-208ENST00000581039 KCNT2Q6UVM3 1135 aa11.31□□□□□ -0.6
RFFL-208ENST00000581039 ABI1Q8IZP0 508 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms