RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 ENAHQ8N8S7 591 aaPredicted RBP12.34□□□□□ -0.43
TOP3A-210ENST00000580713 GLG1Q92896 1179 aa12.34□□□□□ -0.43
TOP3A-210ENST00000580713 INPP4AQ96PE3 977 aaPredicted RBP12.34□□□□□ -0.43
TOP3A-210ENST00000580713 SCUBE2Q9NQ36 999 aa12.34□□□□□ -0.43
TOP3A-210ENST00000580713 PUF60Q9UHX1 559 aaKnown RBP12.34□□□□□ -0.43
TOP3A-210ENST00000580713 CDH22Q9UJ99 828 aa12.34□□□□□ -0.43
TOP3A-210ENST00000580713 TRPV2Q9Y5S1 764 aa12.34□□□□□ -0.43
TOP3A-210ENST00000580713 MYO10Q9HD67 2058 aa12.34□□□□□ -0.43
TOP3A-210ENST00000580713 MYO15AQ9UKN7 3530 aa12.33□□□□□ -0.43
TOP3A-210ENST00000580713 KIAA1671Q9BY89 1806 aa12.33□□□□□ -0.44
TOP3A-210ENST00000580713 PPP1R37O75864 691 aa12.33□□□□□ -0.44
TOP3A-210ENST00000580713 ASGR2P07307 311 aa12.33□□□□□ -0.44
TOP3A-210ENST00000580713 SARSP49591 514 aaKnown RBP12.33□□□□□ -0.44
TOP3A-210ENST00000580713 NFX1Q12986 1120 aaKnown RBP12.33□□□□□ -0.44
TOP3A-210ENST00000580713 NMIQ13287 307 aaPredicted RBP12.33□□□□□ -0.44
TOP3A-210ENST00000580713 TMEM184AQ6ZMB5 413 aa12.33□□□□□ -0.44
TOP3A-210ENST00000580713 COLGALT1Q8NBJ5 622 aa12.33□□□□□ -0.44
TOP3A-210ENST00000580713 RMDN1Q96DB5 314 aa12.33□□□□□ -0.44
TOP3A-210ENST00000580713 ZBTB10Q96DT7 871 aa12.33□□□□□ -0.44
TOP3A-210ENST00000580713 TCF25Q9BQ70 676 aa12.33□□□□□ -0.44
TOP3A-210ENST00000580713 UBAC1Q9BSL1 405 aa12.33□□□□□ -0.44
TOP3A-210ENST00000580713 POMKQ9H5K3 350 aa12.33□□□□□ -0.44
TOP3A-210ENST00000580713 ERAP1Q9NZ08 941 aa12.33□□□□□ -0.44
TOP3A-210ENST00000580713 SQORQ9Y6N5 450 aa12.33□□□□□ -0.44
TOP3A-210ENST00000580713 EP300Q09472 2414 aaPredicted RBP12.32□□□□□ -0.44
TOP3A-210ENST00000580713 PLXNA4Q9HCM2 1894 aa12.32□□□□□ -0.44
TOP3A-210ENST00000580713 MBLAC1A4D2B0 266 aaPredicted RBP12.32□□□□□ -0.44
TOP3A-210ENST00000580713 RRN3P2A6NIE6 340 aa12.32□□□□□ -0.44
TOP3A-210ENST00000580713 HIP1O00291 1037 aa12.32□□□□□ -0.44
TOP3A-210ENST00000580713 FSCN2O14926 492 aa12.32□□□□□ -0.44
TOP3A-210ENST00000580713 KRT37O76014 449 aa12.32□□□□□ -0.44
TOP3A-210ENST00000580713 RPLP2P05387 115 aaKnown RBP12.32□□□□□ -0.44
TOP3A-210ENST00000580713 CHMLP26374 656 aa12.32□□□□□ -0.44
TOP3A-210ENST00000580713 TMEM266Q2M3C6 531 aa12.32□□□□□ -0.44
TOP3A-210ENST00000580713 MARCH8Q5T0T0 291 aa12.32□□□□□ -0.44
TOP3A-210ENST00000580713 IFIT1BQ5T764 474 aaKnown RBP12.32□□□□□ -0.44
TOP3A-210ENST00000580713 NLRX1Q86UT6 975 aa12.32□□□□□ -0.44
TOP3A-210ENST00000580713 GIMAP8Q8ND71 665 aaPredicted RBP12.32□□□□□ -0.44
TOP3A-210ENST00000580713 SEPT1Q8WYJ6 367 aa12.32□□□□□ -0.44
TOP3A-210ENST00000580713 CASP10Q92851 521 aa12.32□□□□□ -0.44
TOP3A-210ENST00000580713 MTMR8Q96EF0 704 aa12.32□□□□□ -0.44
TOP3A-210ENST00000580713 NECTIN4Q96NY8 510 aa12.32□□□□□ -0.44
TOP3A-210ENST00000580713 PIGSQ96S52 555 aa12.32□□□□□ -0.44
TOP3A-210ENST00000580713 SENP7Q9BQF6 1050 aa12.32□□□□□ -0.44
TOP3A-210ENST00000580713 TYW1Q9NV66 732 aaKnown RBP12.32□□□□□ -0.44
TOP3A-210ENST00000580713 ZSWIM5Q9P217 1185 aa12.32□□□□□ -0.44
TOP3A-210ENST00000580713 HCSTQ9UBK5 93 aa12.32□□□□□ -0.44
TOP3A-210ENST00000580713 LIMD1Q9UGP4 676 aa12.32□□□□□ -0.44
TOP3A-210ENST00000580713 DCHS1Q96JQ0 3298 aa12.31□□□□□ -0.44
TOP3A-210ENST00000580713 VPS13AQ96RL7 3174 aa12.31□□□□□ -0.44
TOP3A-210ENST00000580713 DENND3A2RUS2 1198 aa12.31□□□□□ -0.44
TOP3A-210ENST00000580713 HIDE1A8MVS5 230 aa12.31□□□□□ -0.44
TOP3A-210ENST00000580713 EIF5BO60841 1220 aaKnown RBP12.31□□□□□ -0.44
TOP3A-210ENST00000580713 CA8P35219 290 aa12.31□□□□□ -0.44
TOP3A-210ENST00000580713 NT5C2P49902 561 aa12.31□□□□□ -0.44
TOP3A-210ENST00000580713 MFAP1P55081 439 aaKnown RBP12.31□□□□□ -0.44
TOP3A-210ENST00000580713 KCNC3Q14003 757 aa12.31□□□□□ -0.44
TOP3A-210ENST00000580713 ANGPT1Q15389 498 aa12.31□□□□□ -0.44
TOP3A-210ENST00000580713 FAM102BQ5T8I3 360 aa12.31□□□□□ -0.44
TOP3A-210ENST00000580713 TMC7Q7Z402 723 aa12.31□□□□□ -0.44
TOP3A-210ENST00000580713 TICAM2Q86XR7 235 aa12.31□□□□□ -0.44
TOP3A-210ENST00000580713 KIAA2013Q8IYS2 634 aa12.31□□□□□ -0.44
TOP3A-210ENST00000580713 TDRD5Q8NAT2 981 aaKnown RBP12.31□□□□□ -0.44
TOP3A-210ENST00000580713 RASGRP4Q8TDF6 673 aa12.31□□□□□ -0.44
TOP3A-210ENST00000580713 MRPS27Q92552 414 aaKnown RBP12.31□□□□□ -0.44
TOP3A-210ENST00000580713 HINFPQ9BQA5 517 aa12.31□□□□□ -0.44
TOP3A-210ENST00000580713 CELF4Q9BZC1 486 aaKnown RBP12.31□□□□□ -0.44
TOP3A-210ENST00000580713 SMARCAD1Q9H4L7 1026 aa12.31□□□□□ -0.44
TOP3A-210ENST00000580713 NGRNQ9NPE2 291 aaKnown RBP12.31□□□□□ -0.44
TOP3A-210ENST00000580713 DIAPH3Q9NSV4 1193 aa12.31□□□□□ -0.44
TOP3A-210ENST00000580713 GINS2Q9Y248 185 aa12.31□□□□□ -0.44
TOP3A-210ENST00000580713 DOCK5Q9H7D0 1870 aa12.31□□□□□ -0.44
TOP3A-210ENST00000580713 LMNAP02545 664 aaKnown RBP12.3□□□□□ -0.44
TOP3A-210ENST00000580713 WEE2P0C1S8 567 aa12.3□□□□□ -0.44
TOP3A-210ENST00000580713 INSRRP14616 1297 aa12.3□□□□□ -0.44
TOP3A-210ENST00000580713 LAG3P18627 525 aa12.3□□□□□ -0.44
TOP3A-210ENST00000580713 MTHFRP42898 656 aa12.3□□□□□ -0.44
TOP3A-210ENST00000580713 ITIH3Q06033 890 aa12.3□□□□□ -0.44
TOP3A-210ENST00000580713 SMARCC2Q8TAQ2 1214 aa12.3□□□□□ -0.44
TOP3A-210ENST00000580713 PIBF1Q8WXW3 757 aa12.3□□□□□ -0.44
TOP3A-210ENST00000580713 CUL5Q93034 780 aa12.3□□□□□ -0.44
TOP3A-210ENST00000580713 ADAM2Q99965 735 aa12.3□□□□□ -0.44
TOP3A-210ENST00000580713 ADAM7Q9H2U9 754 aa12.3□□□□□ -0.44
TOP3A-210ENST00000580713 TMX1Q9H3N1 280 aa12.3□□□□□ -0.44
TOP3A-210ENST00000580713 PKD2L1Q9P0L9 805 aa12.3□□□□□ -0.44
TOP3A-210ENST00000580713 MAD2L2Q9UI95 211 aa12.3□□□□□ -0.44
TOP3A-210ENST00000580713 LZTS1Q9Y250 596 aa12.3□□□□□ -0.44
TOP3A-210ENST00000580713 IGSF9BQ9UPX0 1349 aa12.3□□□□□ -0.44
TOP3A-210ENST00000580713 GSTTP1A0A1W2PQM5 241 aa12.29□□□□□ -0.44
TOP3A-210ENST00000580713 PI15O43692 258 aa12.29□□□□□ -0.44
TOP3A-210ENST00000580713 MGEA5O60502 916 aa12.29□□□□□ -0.44
TOP3A-210ENST00000580713 KRT76Q01546 638 aa12.29□□□□□ -0.44
TOP3A-210ENST00000580713 KRT17Q04695 432 aa12.29□□□□□ -0.44
TOP3A-210ENST00000580713 PUM1Q14671 1186 aaKnown RBP eCLIP12.29□□□□□ -0.44
TOP3A-210ENST00000580713 RARS2Q5T160 578 aaKnown RBP12.29□□□□□ -0.44
TOP3A-210ENST00000580713 PCNX4Q63HM2 1172 aa12.29□□□□□ -0.44
TOP3A-210ENST00000580713 CWF19L1Q69YN2 538 aaKnown RBP12.29□□□□□ -0.44
TOP3A-210ENST00000580713 CCDC105Q8IYK2 499 aa12.29□□□□□ -0.44
TOP3A-210ENST00000580713 ZDHHC14Q8IZN3 488 aa12.29□□□□□ -0.44
TOP3A-210ENST00000580713 DTWD2Q8NBA8 298 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms