RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 FKBP3Q00688 224 aaKnown RBP16.38■□□□□ 0.21
CDK5RAP3-218ENST00000580391 KNOP1Q1ED39 458 aaKnown RBP16.38■□□□□ 0.21
CDK5RAP3-218ENST00000580391 SWSAP1Q6NVH7 229 aa16.38■□□□□ 0.21
CDK5RAP3-218ENST00000580391 ABHD15Q6UXT9 468 aa16.38■□□□□ 0.21
CDK5RAP3-218ENST00000580391 GPRC5AQ8NFJ5 357 aa16.38■□□□□ 0.21
CDK5RAP3-218ENST00000580391 PTPN18Q99952 460 aa16.38■□□□□ 0.21
CDK5RAP3-218ENST00000580391 NOC4LQ9BVI4 516 aaKnown RBP16.38■□□□□ 0.21
CDK5RAP3-218ENST00000580391 SPTLC3Q9NUV7 552 aa16.38■□□□□ 0.21
CDK5RAP3-218ENST00000580391 SEL1LQ9UBV2 794 aa16.38■□□□□ 0.21
CDK5RAP3-218ENST00000580391 IGSF9BQ9UPX0 1349 aa16.38■□□□□ 0.21
CDK5RAP3-218ENST00000580391 FGFR1OPO95684 399 aaKnown RBP16.38■□□□□ 0.21
CDK5RAP3-218ENST00000580391 GYPCP04921 128 aa16.38■□□□□ 0.21
CDK5RAP3-218ENST00000580391 SUPT20HL2P0C7V6 817 aa16.38■□□□□ 0.21
CDK5RAP3-218ENST00000580391 RBL2Q08999 1139 aa16.38■□□□□ 0.21
CDK5RAP3-218ENST00000580391 ZC2HC1CQ53FD0 456 aaPredicted RBP16.38■□□□□ 0.21
CDK5RAP3-218ENST00000580391 XKR9Q5GH70 373 aa16.38■□□□□ 0.21
CDK5RAP3-218ENST00000580391 ODR4Q5SWX8 454 aa16.38■□□□□ 0.21
CDK5RAP3-218ENST00000580391 CHADLQ6NUI6 762 aa16.38■□□□□ 0.21
CDK5RAP3-218ENST00000580391 ANO5Q75V66 913 aa16.38■□□□□ 0.21
CDK5RAP3-218ENST00000580391 FAM178BQ8IXR5 827 aa16.38■□□□□ 0.21
CDK5RAP3-218ENST00000580391 ZC3H3Q8IXZ2 948 aaKnown RBP16.38■□□□□ 0.21
CDK5RAP3-218ENST00000580391 ATP6V0A1Q93050 837 aa16.38■□□□□ 0.21
CDK5RAP3-218ENST00000580391 SYNGAP1Q96PV0 1343 aa16.38■□□□□ 0.21
CDK5RAP3-218ENST00000580391 EIF3DO15371 548 aaKnown RBP eCLIP16.37■□□□□ 0.21
CDK5RAP3-218ENST00000580391 STBD1O95210 358 aa16.37■□□□□ 0.21
CDK5RAP3-218ENST00000580391 PRKCEQ02156 737 aa16.37■□□□□ 0.21
CDK5RAP3-218ENST00000580391 PPP4R3CPQ6ZMV5 832 aa16.37■□□□□ 0.21
CDK5RAP3-218ENST00000580391 TMEM139Q8IV31 216 aa16.37■□□□□ 0.21
CDK5RAP3-218ENST00000580391 KSR1Q8IVT5 923 aa16.37■□□□□ 0.21
CDK5RAP3-218ENST00000580391 CPLX3Q8WVH0 158 aa16.37■□□□□ 0.21
CDK5RAP3-218ENST00000580391 IKZF4Q9H2S9 585 aa16.37■□□□□ 0.21
CDK5RAP3-218ENST00000580391 ANKEF1Q9NU02 776 aa16.37■□□□□ 0.21
CDK5RAP3-218ENST00000580391 MFAP3LO75121 409 aa16.37■□□□□ 0.21
CDK5RAP3-218ENST00000580391 FARP2O94887 1054 aaPredicted RBP16.37■□□□□ 0.21
CDK5RAP3-218ENST00000580391 ARIH2O95376 493 aa16.37■□□□□ 0.21
CDK5RAP3-218ENST00000580391 TPM2P07951 284 aa16.37■□□□□ 0.21
CDK5RAP3-218ENST00000580391 FXR1P51114 621 aaKnown RBP eCLIP16.37■□□□□ 0.21
CDK5RAP3-218ENST00000580391 CCNA1P78396 465 aa16.37■□□□□ 0.21
CDK5RAP3-218ENST00000580391 EDRF1Q3B7T1 1238 aa16.37■□□□□ 0.21
CDK5RAP3-218ENST00000580391 MIS18BP1Q6P0N0 1132 aa16.37■□□□□ 0.21
CDK5RAP3-218ENST00000580391 PPFIBP1Q86W92 1011 aa16.37■□□□□ 0.21
CDK5RAP3-218ENST00000580391 FBXO16Q8IX29 292 aaPredicted RBP16.37■□□□□ 0.21
CDK5RAP3-218ENST00000580391 CEP63Q96MT8 703 aa16.37■□□□□ 0.21
CDK5RAP3-218ENST00000580391 TMX1Q9H3N1 280 aa16.37■□□□□ 0.21
CDK5RAP3-218ENST00000580391 GPRC5CQ9NQ84 441 aa16.37■□□□□ 0.21
CDK5RAP3-218ENST00000580391 TYW1Q9NV66 732 aaKnown RBP16.37■□□□□ 0.21
CDK5RAP3-218ENST00000580391 TRAF3IP3Q9Y228 551 aa16.37■□□□□ 0.21
CDK5RAP3-218ENST00000580391 DOCK3Q8IZD9 2030 aa16.36■□□□□ 0.21
CDK5RAP3-218ENST00000580391 AKR1B15C9JRZ8 316 aaPredicted RBP16.36■□□□□ 0.21
CDK5RAP3-218ENST00000580391 NR2F2P24468 414 aa16.36■□□□□ 0.21
CDK5RAP3-218ENST00000580391 CASP14P31944 242 aa16.36■□□□□ 0.21
CDK5RAP3-218ENST00000580391 DNM2P50570 870 aa16.36■□□□□ 0.21
CDK5RAP3-218ENST00000580391 MAN2A1Q16706 1144 aa16.36■□□□□ 0.21
CDK5RAP3-218ENST00000580391 RASAL3Q86YV0 1011 aa16.36■□□□□ 0.21
CDK5RAP3-218ENST00000580391 CCDC112Q8NEF3 446 aa16.36■□□□□ 0.21
CDK5RAP3-218ENST00000580391 MORF4L1Q9UBU8 362 aa16.36■□□□□ 0.21
CDK5RAP3-218ENST00000580391 SEPT9Q9UHD8 586 aaPredicted RBP16.36■□□□□ 0.21
CDK5RAP3-218ENST00000580391 A0A1W2PQC6 194 aa16.35■□□□□ 0.21
CDK5RAP3-218ENST00000580391 USP27XA6NNY8 438 aa16.35■□□□□ 0.21
CDK5RAP3-218ENST00000580391 K7ENM7 598 aa16.35■□□□□ 0.21
CDK5RAP3-218ENST00000580391 PDXKO00764 312 aa16.35■□□□□ 0.21
CDK5RAP3-218ENST00000580391 GGPS1O95749 300 aa16.35■□□□□ 0.21
CDK5RAP3-218ENST00000580391 GCLCP48506 637 aaPredicted RBP16.35■□□□□ 0.21
CDK5RAP3-218ENST00000580391 LY6KQ17RY6 165 aa16.35■□□□□ 0.21
CDK5RAP3-218ENST00000580391 CCDC40Q4G0X9 1142 aa16.35■□□□□ 0.21
CDK5RAP3-218ENST00000580391 ZNF720Q7Z2F6 126 aa16.35■□□□□ 0.21
CDK5RAP3-218ENST00000580391 PARK7Q99497 189 aaKnown RBP16.35■□□□□ 0.21
CDK5RAP3-218ENST00000580391 MPHOSPH6Q99547 160 aaKnown RBP16.35■□□□□ 0.21
CDK5RAP3-218ENST00000580391 UBE4BO95155 1302 aa16.35■□□□□ 0.21
CDK5RAP3-218ENST00000580391 RNF225M0QZC1 329 aaPredicted RBP16.35■□□□□ 0.21
CDK5RAP3-218ENST00000580391 TGFB1I1O43294 461 aa16.35■□□□□ 0.21
CDK5RAP3-218ENST00000580391 NRDCO43847 1150 aa16.35■□□□□ 0.21
CDK5RAP3-218ENST00000580391 DKC1O60832 514 aaKnown RBP eCLIP16.35■□□□□ 0.21
CDK5RAP3-218ENST00000580391 PPP1R37O75864 691 aa16.35■□□□□ 0.21
CDK5RAP3-218ENST00000580391 ATG7O95352 703 aa16.35■□□□□ 0.21
CDK5RAP3-218ENST00000580391 KLK7P49862 253 aa16.35■□□□□ 0.21
CDK5RAP3-218ENST00000580391 TBC1D8BQ0IIM8 1120 aa16.35■□□□□ 0.21
CDK5RAP3-218ENST00000580391 ADAM9Q13443 819 aa16.35■□□□□ 0.21
CDK5RAP3-218ENST00000580391 VWA3BQ502W6 1294 aa16.35■□□□□ 0.21
CDK5RAP3-218ENST00000580391 CEP170P1Q96L14 293 aa16.35■□□□□ 0.21
CDK5RAP3-218ENST00000580391 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.35■□□□□ 0.211e-7■■□□□ 13.3
CDK5RAP3-218ENST00000580391 ZNF236Q9UL36 1845 aa16.34■□□□□ 0.21
CDK5RAP3-218ENST00000580391 CALUO43852 315 aaPredicted RBP16.34■□□□□ 0.21
CDK5RAP3-218ENST00000580391 ADORA2AP29274 412 aa16.34■□□□□ 0.21
CDK5RAP3-218ENST00000580391 NEDD9Q14511 834 aa16.34■□□□□ 0.21
CDK5RAP3-218ENST00000580391 SYCP1Q15431 976 aa16.34■□□□□ 0.21
CDK5RAP3-218ENST00000580391 FAM102BQ5T8I3 360 aa16.34■□□□□ 0.21
CDK5RAP3-218ENST00000580391 MORC4Q8TE76 937 aa16.34■□□□□ 0.21
CDK5RAP3-218ENST00000580391 STRA6Q9BX79 667 aa16.34■□□□□ 0.21
CDK5RAP3-218ENST00000580391 NDST4Q9H3R1 872 aa16.34■□□□□ 0.21
CDK5RAP3-218ENST00000580391 ZNF302Q9NR11 478 aa16.34■□□□□ 0.21
CDK5RAP3-218ENST00000580391 LARSQ9P2J5 1176 aaKnown RBP16.34■□□□□ 0.21
CDK5RAP3-218ENST00000580391 GSTTP1A0A1W2PQM5 241 aa16.33■□□□□ 0.21
CDK5RAP3-218ENST00000580391 CETN3O15182 167 aa16.33■□□□□ 0.21
CDK5RAP3-218ENST00000580391 CLIC2O15247 247 aa16.33■□□□□ 0.21
CDK5RAP3-218ENST00000580391 NR3C1P04150 777 aa16.33■□□□□ 0.21
CDK5RAP3-218ENST00000580391 PLS3P13797 630 aa16.33■□□□□ 0.21
CDK5RAP3-218ENST00000580391 ATP4AP20648 1035 aa16.33■□□□□ 0.21
CDK5RAP3-218ENST00000580391 MARSP56192 900 aaKnown RBP16.33■□□□□ 0.21
CDK5RAP3-218ENST00000580391 TRIM14Q14142 442 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms