RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 EARS2Q5JPH6 523 aaKnown RBP12.26□□□□□ -0.45
NDEL1-208ENST00000580237 FAM26DQ5JW98 314 aa12.26□□□□□ -0.45
NDEL1-208ENST00000580237 NCAPH2Q6IBW4 605 aa12.26□□□□□ -0.45
NDEL1-208ENST00000580237 FAM117BQ6P1L5 589 aa12.26□□□□□ -0.45
NDEL1-208ENST00000580237 TSHZ1Q6ZSZ6 1077 aa12.26□□□□□ -0.45
NDEL1-208ENST00000580237 BANK1Q8NDB2 785 aa12.26□□□□□ -0.45
NDEL1-208ENST00000580237 MYLIPQ8WY64 445 aa12.26□□□□□ -0.45
NDEL1-208ENST00000580237 TNFRSF25Q93038 417 aa12.26□□□□□ -0.45
NDEL1-208ENST00000580237 SCLT1Q96NL6 688 aa12.26□□□□□ -0.45
NDEL1-208ENST00000580237 GAS2L1Q99501 681 aaPredicted RBP12.26□□□□□ -0.45
NDEL1-208ENST00000580237 CDX2Q99626 313 aaPredicted RBP12.26□□□□□ -0.45
NDEL1-208ENST00000580237 NRBP2Q9NSY0 501 aa12.26□□□□□ -0.45
NDEL1-208ENST00000580237 GTF3C3Q9Y5Q9 886 aa12.26□□□□□ -0.45
NDEL1-208ENST00000580237 RALGAPA2Q2PPJ7 1873 aa12.25□□□□□ -0.45
NDEL1-208ENST00000580237 SZT2Q5T011 3432 aa12.25□□□□□ -0.45
NDEL1-208ENST00000580237 MAGEB2O15479 319 aa12.25□□□□□ -0.45
NDEL1-208ENST00000580237 DKC1O60832 514 aaKnown RBP eCLIP12.25□□□□□ -0.45
NDEL1-208ENST00000580237 C22orf31O95567 290 aa12.25□□□□□ -0.45
NDEL1-208ENST00000580237 ATP4AP20648 1035 aa12.25□□□□□ -0.45
NDEL1-208ENST00000580237 TMOD1P28289 359 aa12.25□□□□□ -0.45
NDEL1-208ENST00000580237 MGAT3Q09327 533 aa12.25□□□□□ -0.45
NDEL1-208ENST00000580237 TBC1D8BQ0IIM8 1120 aa12.25□□□□□ -0.45
NDEL1-208ENST00000580237 PAK2Q13177 524 aa12.25□□□□□ -0.45
NDEL1-208ENST00000580237 PPP2R5CQ13362 524 aa12.25□□□□□ -0.45
NDEL1-208ENST00000580237 LPIN1Q14693 890 aa12.25□□□□□ -0.45
NDEL1-208ENST00000580237 TCTN1Q2MV58 587 aa12.25□□□□□ -0.45
NDEL1-208ENST00000580237 MTERF2Q49AM1 385 aa12.25□□□□□ -0.45
NDEL1-208ENST00000580237 FBXO47Q5MNV8 452 aa12.25□□□□□ -0.45
NDEL1-208ENST00000580237 TMCO2Q7Z6W1 182 aaPredicted RBP12.25□□□□□ -0.45
NDEL1-208ENST00000580237 PIAS4Q8N2W9 510 aaPredicted RBP12.25□□□□□ -0.45
NDEL1-208ENST00000580237 PPP1R16BQ96T49 567 aa12.25□□□□□ -0.45
NDEL1-208ENST00000580237 KCNMB3Q9NPA1 279 aa12.25□□□□□ -0.45
NDEL1-208ENST00000580237 NOL7Q9UMY1 257 aaKnown RBP12.25□□□□□ -0.45
NDEL1-208ENST00000580237 AKT3Q9Y243 479 aa12.25□□□□□ -0.45
NDEL1-208ENST00000580237 ZNF862O60290 1169 aa12.24□□□□□ -0.45
NDEL1-208ENST00000580237 MCM7P33993 719 aa12.24□□□□□ -0.45
NDEL1-208ENST00000580237 CLCN3P51790 818 aa12.24□□□□□ -0.45
NDEL1-208ENST00000580237 TTC3P53804 2025 aa12.24□□□□□ -0.45
NDEL1-208ENST00000580237 PSMC5P62195 406 aa12.24□□□□□ -0.45
NDEL1-208ENST00000580237 GRIN2CQ14957 1233 aa12.24□□□□□ -0.45
NDEL1-208ENST00000580237 XKR3Q5GH77 459 aa12.24□□□□□ -0.45
NDEL1-208ENST00000580237 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.24□□□□□ -0.45
NDEL1-208ENST00000580237 NME8Q8N427 588 aa12.24□□□□□ -0.45
NDEL1-208ENST00000580237 USP38Q8NB14 1042 aa12.24□□□□□ -0.45
NDEL1-208ENST00000580237 TMX3Q96JJ7 454 aa12.24□□□□□ -0.45
NDEL1-208ENST00000580237 CCDC43Q96MW1 224 aaKnown RBP12.24□□□□□ -0.45
NDEL1-208ENST00000580237 CELF4Q9BZC1 486 aaKnown RBP12.24□□□□□ -0.45
NDEL1-208ENST00000580237 FOXP1Q9H334 677 aaPredicted RBP12.24□□□□□ -0.45
NDEL1-208ENST00000580237 PRDM12Q9H4Q4 367 aa12.24□□□□□ -0.45
NDEL1-208ENST00000580237 VAV3Q9UKW4 847 aa12.24□□□□□ -0.45
NDEL1-208ENST00000580237 DDX11L8A8MPP1 907 aa12.23□□□□□ -0.45
NDEL1-208ENST00000580237 ZBTB42B2RXF5 422 aa12.23□□□□□ -0.45
NDEL1-208ENST00000580237 RBAK-RBAKDNI3L0D1 243 aa12.23□□□□□ -0.45
NDEL1-208ENST00000580237 EML1O00423 815 aa12.23□□□□□ -0.45
NDEL1-208ENST00000580237 UPP2O95045 317 aa12.23□□□□□ -0.45
NDEL1-208ENST00000580237 GJB5O95377 273 aa12.23□□□□□ -0.45
NDEL1-208ENST00000580237 VTNP04004 478 aa12.23□□□□□ -0.45
NDEL1-208ENST00000580237 IBSPP21815 317 aaPredicted RBP12.23□□□□□ -0.45
NDEL1-208ENST00000580237 CD52P31358 61 aa12.23□□□□□ -0.45
NDEL1-208ENST00000580237 QARSP47897 775 aaKnown RBP12.23□□□□□ -0.45
NDEL1-208ENST00000580237 ODR4Q5SWX8 454 aa12.23□□□□□ -0.45
NDEL1-208ENST00000580237 EFCAB12Q6NXP0 572 aa12.23□□□□□ -0.45
NDEL1-208ENST00000580237 LRRC71Q8N4P6 559 aa12.23□□□□□ -0.45
NDEL1-208ENST00000580237 FBXO18Q8NFZ0 1043 aa12.23□□□□□ -0.45
NDEL1-208ENST00000580237 MAFAQ8NHW3 353 aaPredicted RBP12.23□□□□□ -0.45
NDEL1-208ENST00000580237 YME1L1Q96TA2 773 aa12.23□□□□□ -0.45
NDEL1-208ENST00000580237 LXNQ9BS40 222 aa12.23□□□□□ -0.45
NDEL1-208ENST00000580237 OSBPL7Q9BZF2 842 aa12.23□□□□□ -0.45
NDEL1-208ENST00000580237 SUGCTQ9HAC7 445 aa12.23□□□□□ -0.45
NDEL1-208ENST00000580237 LAMA2P24043 3122 aaKnown RBP12.23□□□□□ -0.45
NDEL1-208ENST00000580237 KDM3AQ9Y4C1 1321 aa12.22□□□□□ -0.45
NDEL1-208ENST00000580237 TMEM150BA6NC51 233 aa12.22□□□□□ -0.45
NDEL1-208ENST00000580237 H3BQV1 296 aa12.22□□□□□ -0.45
NDEL1-208ENST00000580237 RPS6KA5O75582 802 aa12.22□□□□□ -0.45
NDEL1-208ENST00000580237 CD2BP2O95400 341 aaKnown RBP12.22□□□□□ -0.45
NDEL1-208ENST00000580237 IGFBP4P22692 258 aa12.22□□□□□ -0.45
NDEL1-208ENST00000580237 TXKP42681 527 aa12.22□□□□□ -0.45
NDEL1-208ENST00000580237 CYP4A11Q02928 519 aa12.22□□□□□ -0.45
NDEL1-208ENST00000580237 NFX1Q12986 1120 aaKnown RBP12.22□□□□□ -0.45
NDEL1-208ENST00000580237 KIZQ2M2Z5 673 aa12.22□□□□□ -0.45
NDEL1-208ENST00000580237 TMEM266Q2M3C6 531 aa12.22□□□□□ -0.45
NDEL1-208ENST00000580237 TTC38Q5R3I4 469 aa12.22□□□□□ -0.45
NDEL1-208ENST00000580237 PLA2G4FQ68DD2 849 aa12.22□□□□□ -0.45
NDEL1-208ENST00000580237 MCTP1Q6DN14 999 aa12.22□□□□□ -0.45
NDEL1-208ENST00000580237 B3GNT9Q6UX72 402 aa12.22□□□□□ -0.45
NDEL1-208ENST00000580237 NOSTRINQ8IVI9 506 aa12.22□□□□□ -0.45
NDEL1-208ENST00000580237 KIAA0319LQ8IZA0 1049 aa12.22□□□□□ -0.45
NDEL1-208ENST00000580237 ARNTL2Q8WYA1 636 aa12.22□□□□□ -0.45
NDEL1-208ENST00000580237 HAS1Q92839 578 aa12.22□□□□□ -0.45
NDEL1-208ENST00000580237 RAD9AQ99638 391 aa12.22□□□□□ -0.45
NDEL1-208ENST00000580237 OSMRQ99650 979 aa12.22□□□□□ -0.45
NDEL1-208ENST00000580237 FTHL17Q9BXU8 183 aa12.22□□□□□ -0.45
NDEL1-208ENST00000580237 TTC12Q9H892 705 aaPredicted RBP12.22□□□□□ -0.45
NDEL1-208ENST00000580237 CERS4Q9HA82 394 aa12.22□□□□□ -0.45
NDEL1-208ENST00000580237 MTUS1Q9ULD2 1270 aa12.22□□□□□ -0.45
NDEL1-208ENST00000580237 PCDHA12Q9UN75 941 aa12.22□□□□□ -0.45
NDEL1-208ENST00000580237 SMC3Q9UQE7 1217 aa12.22□□□□□ -0.45
NDEL1-208ENST00000580237 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.22□□□□□ -0.45
NDEL1-208ENST00000580237 SQORQ9Y6N5 450 aa12.22□□□□□ -0.45
NDEL1-208ENST00000580237 KIAA1671Q9BY89 1806 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms