RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	CLIP2	Q9UDT6	1046 aa		7.1	□□□□□ -1.27
KPNB1-209	ENST00000580158	FPGT-TNNI3K	V9GXZ4	949 aa		7.1	□□□□□ -1.27
KPNB1-209	ENST00000580158	WDR87	Q6ZQQ6	2873 aa		7.1	□□□□□ -1.27
KPNB1-209	ENST00000580158	LOXHD1	Q8IVV2	1947 aa		7.09	□□□□□ -1.27
KPNB1-209	ENST00000580158	ANKRD11	Q6UB99	2663 aa	Predicted RBP	7.09	□□□□□ -1.27
KPNB1-209	ENST00000580158	TMEM232	C9JQI7	657 aa		7.09	□□□□□ -1.27
KPNB1-209	ENST00000580158	LILRA1	O75019	489 aa		7.09	□□□□□ -1.27
KPNB1-209	ENST00000580158	GH1	P01241	217 aa		7.09	□□□□□ -1.27
KPNB1-209	ENST00000580158	IGHA1	P01876	353 aa		7.09	□□□□□ -1.27
KPNB1-209	ENST00000580158	PROS1	P07225	676 aa		7.09	□□□□□ -1.27
KPNB1-209	ENST00000580158	UBE3A	Q05086	875 aa		7.09	□□□□□ -1.27
KPNB1-209	ENST00000580158	SRSF11	Q05519	484 aa	Known RBP	7.09	□□□□□ -1.27
KPNB1-209	ENST00000580158	ITIH3	Q06033	890 aa		7.09	□□□□□ -1.27
KPNB1-209	ENST00000580158	OS9	Q13438	667 aa	Predicted RBP	7.09	□□□□□ -1.27
KPNB1-209	ENST00000580158	BAAT	Q14032	418 aa	Predicted RBP	7.09	□□□□□ -1.27
KPNB1-209	ENST00000580158	TTF1	Q15361	905 aa	Predicted RBP	7.09	□□□□□ -1.27
KPNB1-209	ENST00000580158	DUSP6	Q16828	381 aa		7.09	□□□□□ -1.27
KPNB1-209	ENST00000580158	KIAA0753	Q2KHM9	967 aa		7.09	□□□□□ -1.27
KPNB1-209	ENST00000580158	MUM1L1	Q5H9M0	696 aa		7.09	□□□□□ -1.27
KPNB1-209	ENST00000580158	SLC9C2	Q5TAH2	1124 aa		7.09	□□□□□ -1.27
KPNB1-209	ENST00000580158	PDE12	Q6L8Q7	609 aa	Known RBP	7.09	□□□□□ -1.27
KPNB1-209	ENST00000580158	CHST3	Q7LGC8	479 aa		7.09	□□□□□ -1.27
KPNB1-209	ENST00000580158	SIX5	Q8N196	739 aa		7.09	□□□□□ -1.27
KPNB1-209	ENST00000580158	EPS8L1	Q8TE68	723 aa		7.09	□□□□□ -1.27
KPNB1-209	ENST00000580158	DDX1	Q92499	740 aa	Known RBP	7.09	□□□□□ -1.27
KPNB1-209	ENST00000580158	KAT2B	Q92831	832 aa		7.09	□□□□□ -1.27
KPNB1-209	ENST00000580158	WNT8B	Q93098	351 aa		7.09	□□□□□ -1.27
KPNB1-209	ENST00000580158	ZNF689	Q96CS4	500 aa	Predicted RBP	7.09	□□□□□ -1.27
KPNB1-209	ENST00000580158	MKNK2	Q9HBH9	465 aa		7.09	□□□□□ -1.27
KPNB1-209	ENST00000580158	IGSF5	Q9NSI5	407 aa		7.09	□□□□□ -1.27
KPNB1-209	ENST00000580158	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	7.09	□□□□□ -1.27
KPNB1-209	ENST00000580158	CAND2	O75155	1236 aa		7.08	□□□□□ -1.28
KPNB1-209	ENST00000580158	GNAI3	P08754	354 aa		7.08	□□□□□ -1.28
KPNB1-209	ENST00000580158	CALML3	P27482	149 aa		7.08	□□□□□ -1.28
KPNB1-209	ENST00000580158	MTHFR	P42898	656 aa		7.08	□□□□□ -1.28
KPNB1-209	ENST00000580158	RBM10	P98175	930 aa	Known RBP	7.08	□□□□□ -1.28
KPNB1-209	ENST00000580158	MTX1	Q13505	466 aa		7.08	□□□□□ -1.28
KPNB1-209	ENST00000580158	TDG	Q13569	410 aa		7.08	□□□□□ -1.28
KPNB1-209	ENST00000580158	SPECC1	Q5M775	1068 aa		7.08	□□□□□ -1.28
KPNB1-209	ENST00000580158	FOXD4L5	Q5VV16	416 aa	Predicted RBP	7.08	□□□□□ -1.28
KPNB1-209	ENST00000580158	SLFN13	Q68D06	897 aa		7.08	□□□□□ -1.28
KPNB1-209	ENST00000580158	SYCE2	Q6PIF2	218 aa		7.08	□□□□□ -1.28
KPNB1-209	ENST00000580158	FOXR1	Q6PIV2	292 aa		7.08	□□□□□ -1.28
KPNB1-209	ENST00000580158	LYPD4	Q6UWN0	246 aa		7.08	□□□□□ -1.28
KPNB1-209	ENST00000580158	PRICKLE2	Q7Z3G6	844 aa		7.08	□□□□□ -1.28
KPNB1-209	ENST00000580158	SERINC5	Q86VE9	423 aa		7.08	□□□□□ -1.28
KPNB1-209	ENST00000580158	C1orf210	Q8IVY1	113 aa		7.08	□□□□□ -1.28
KPNB1-209	ENST00000580158	NETO1	Q8TDF5	533 aa		7.08	□□□□□ -1.28
KPNB1-209	ENST00000580158	STAG1	Q8WVM7	1258 aa		7.08	□□□□□ -1.28
KPNB1-209	ENST00000580158	ATRIP	Q8WXE1	791 aa		7.08	□□□□□ -1.28
KPNB1-209	ENST00000580158	ATP6V0A1	Q93050	837 aa		7.08	□□□□□ -1.28
KPNB1-209	ENST00000580158	FAM117A	Q9C073	453 aa		7.08	□□□□□ -1.28
KPNB1-209	ENST00000580158	POMK	Q9H5K3	350 aa		7.08	□□□□□ -1.28
KPNB1-209	ENST00000580158	ERVK-5	Q9HDB9	667 aa		7.08	□□□□□ -1.28
KPNB1-209	ENST00000580158	CYP26B1	Q9NR63	512 aa		7.08	□□□□□ -1.28
KPNB1-209	ENST00000580158	CCPG1	Q9ULG6	757 aa		7.08	□□□□□ -1.28
KPNB1-209	ENST00000580158	ZMIZ1	Q9ULJ6	1067 aa		7.08	□□□□□ -1.28
KPNB1-209	ENST00000580158	SYNPO2	Q9UMS6	1093 aa		7.08	□□□□□ -1.28
KPNB1-209	ENST00000580158	PCDHB12	Q9Y5F1	795 aa		7.08	□□□□□ -1.28
KPNB1-209	ENST00000580158	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	7.07	□□□□□ -1.28
KPNB1-209	ENST00000580158	CYP2D7	A0A087X1C5	515 aa		7.07	□□□□□ -1.28
KPNB1-209	ENST00000580158	C17orf102	A2RUQ5	167 aa		7.07	□□□□□ -1.28
KPNB1-209	ENST00000580158	ESPN	B1AK53	854 aa		7.07	□□□□□ -1.28
KPNB1-209	ENST00000580158	SLC30A4	O14863	429 aa		7.07	□□□□□ -1.28
KPNB1-209	ENST00000580158	DGKI	O75912	1065 aa		7.07	□□□□□ -1.28
KPNB1-209	ENST00000580158	CTSH	P09668	335 aa		7.07	□□□□□ -1.28
KPNB1-209	ENST00000580158	RNF144A	P50876	292 aa	Predicted RBP	7.07	□□□□□ -1.28
KPNB1-209	ENST00000580158	SPOUT1	Q5T280	376 aa	Known RBP	7.07	□□□□□ -1.28
KPNB1-209	ENST00000580158	LLGL2	Q6P1M3	1020 aa		7.07	□□□□□ -1.28
KPNB1-209	ENST00000580158	LRSAM1	Q6UWE0	723 aa		7.07	□□□□□ -1.28
KPNB1-209	ENST00000580158	CMTR2	Q8IYT2	770 aa	Known RBP	7.07	□□□□□ -1.28
KPNB1-209	ENST00000580158	ZNF444	Q8N0Y2	327 aa	Predicted RBP	7.07	□□□□□ -1.28
KPNB1-209	ENST00000580158	LCORL	Q8N3X6	602 aa		7.07	□□□□□ -1.28
KPNB1-209	ENST00000580158	KDF1	Q8NAX2	398 aa	Predicted RBP	7.07	□□□□□ -1.28
KPNB1-209	ENST00000580158	GMCL1P1	Q8NEA9	526 aa		7.07	□□□□□ -1.28
KPNB1-209	ENST00000580158	DNER	Q8NFT8	737 aa		7.07	□□□□□ -1.28
KPNB1-209	ENST00000580158	VN1R2	Q8NFZ6	395 aa		7.07	□□□□□ -1.28
KPNB1-209	ENST00000580158	RASGRP4	Q8TDF6	673 aa		7.07	□□□□□ -1.28
KPNB1-209	ENST00000580158	CASP10	Q92851	521 aa		7.07	□□□□□ -1.28
KPNB1-209	ENST00000580158	MKL1	Q969V6	931 aa		7.07	□□□□□ -1.28
KPNB1-209	ENST00000580158	ACSF2	Q96CM8	615 aa	Predicted RBP	7.07	□□□□□ -1.28
KPNB1-209	ENST00000580158	GMCL1	Q96IK5	515 aa		7.07	□□□□□ -1.28
KPNB1-209	ENST00000580158	MEIS3	Q99687	375 aa		7.07	□□□□□ -1.28
KPNB1-209	ENST00000580158	ADAM7	Q9H2U9	754 aa		7.07	□□□□□ -1.28
KPNB1-209	ENST00000580158	ANTXR1	Q9H6X2	564 aa		7.07	□□□□□ -1.28
KPNB1-209	ENST00000580158	PRKRIP1	Q9H875	184 aa	Predicted RBP	7.07	□□□□□ -1.28
KPNB1-209	ENST00000580158	RC3H2	Q9HBD1	1191 aa	Known RBP	7.07	□□□□□ -1.28
KPNB1-209	ENST00000580158	DBR1	Q9UK59	544 aa	Known RBP	7.07	□□□□□ -1.28
KPNB1-209	ENST00000580158	GMEB2	Q9UKD1	530 aa		7.07	□□□□□ -1.28
KPNB1-209	ENST00000580158	DUSP12	Q9UNI6	340 aa		7.07	□□□□□ -1.28
KPNB1-209	ENST00000580158	UST	Q9Y2C2	406 aa		7.07	□□□□□ -1.28
KPNB1-209	ENST00000580158	MRPL42	Q9Y6G3	142 aa	Known RBP	7.07	□□□□□ -1.28
KPNB1-209	ENST00000580158	ZNF532	Q9HCE3	1301 aa		7.06	□□□□□ -1.28
KPNB1-209	ENST00000580158	HAS3	O00219	553 aa		7.06	□□□□□ -1.28
KPNB1-209	ENST00000580158	ENPP3	O14638	875 aa		7.06	□□□□□ -1.28
KPNB1-209	ENST00000580158	ARIH2	O95376	493 aa		7.06	□□□□□ -1.28
KPNB1-209	ENST00000580158	TTLL1	O95922	423 aa		7.06	□□□□□ -1.28
KPNB1-209	ENST00000580158	F2	P00734	622 aa		7.06	□□□□□ -1.28
KPNB1-209	ENST00000580158	CELA2B	P08218	269 aa	Predicted RBP	7.06	□□□□□ -1.28
KPNB1-209	ENST00000580158	STAG3L1	P0CL83	205 aa		7.06	□□□□□ -1.28

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