RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 UBR7Q8N806 425 aa7.33□□□□□ -1.24
COPS3-216ENST00000579716 GPBAR1Q8TDU6 330 aa7.33□□□□□ -1.24
COPS3-216ENST00000579716 NINJ1Q92982 152 aa7.33□□□□□ -1.24
COPS3-216ENST00000579716 TTC17Q96AE7 1141 aa7.33□□□□□ -1.24
COPS3-216ENST00000579716 CLMNQ96JQ2 1002 aa7.33□□□□□ -1.24
COPS3-216ENST00000579716 CNDP2Q96KP4 475 aaKnown RBP7.33□□□□□ -1.24
COPS3-216ENST00000579716 SETDB2Q96T68 719 aa7.33□□□□□ -1.24
COPS3-216ENST00000579716 LMAN2LQ9H0V9 348 aa7.33□□□□□ -1.24
COPS3-216ENST00000579716 TMEM39AQ9NV64 488 aa7.33□□□□□ -1.24
COPS3-216ENST00000579716 KLHL11Q9NVR0 708 aa7.33□□□□□ -1.24
COPS3-216ENST00000579716 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.33□□□□□ -1.24
COPS3-216ENST00000579716 BARX2Q9UMQ3 279 aaPredicted RBP7.33□□□□□ -1.24
COPS3-216ENST00000579716 NOSIPQ9Y314 301 aaKnown RBP7.33□□□□□ -1.24
COPS3-216ENST00000579716 C2CD2Q9Y426 696 aa7.33□□□□□ -1.24
COPS3-216ENST00000579716 BRD4O60885 1362 aaPredicted RBP7.33□□□□□ -1.24
COPS3-216ENST00000579716 TMEM94Q12767 1356 aa7.33□□□□□ -1.24
COPS3-216ENST00000579716 AKR1B15C9JRZ8 316 aaPredicted RBP7.32□□□□□ -1.24
COPS3-216ENST00000579716 F8VZ95 297 aa7.32□□□□□ -1.24
COPS3-216ENST00000579716 IGF2BP3O00425 579 aaKnown RBP eCLIP7.32□□□□□ -1.24
COPS3-216ENST00000579716 FYB1O15117 783 aa7.32□□□□□ -1.24
COPS3-216ENST00000579716 KPNA6O60684 536 aa7.32□□□□□ -1.24
COPS3-216ENST00000579716 GADD45BO75293 160 aaPredicted RBP7.32□□□□□ -1.24
COPS3-216ENST00000579716 CD9P21926 228 aa7.32□□□□□ -1.24
COPS3-216ENST00000579716 MUTP22033 750 aa7.32□□□□□ -1.24
COPS3-216ENST00000579716 MAN2A2P49641 1150 aa7.32□□□□□ -1.24
COPS3-216ENST00000579716 MRE11P49959 708 aa7.32□□□□□ -1.24
COPS3-216ENST00000579716 ZP2Q05996 745 aa7.32□□□□□ -1.24
COPS3-216ENST00000579716 CCDC173Q0VFZ6 552 aa7.32□□□□□ -1.24
COPS3-216ENST00000579716 PPP2R5DQ14738 602 aa7.32□□□□□ -1.24
COPS3-216ENST00000579716 PKN1Q16512 942 aa7.32□□□□□ -1.24
COPS3-216ENST00000579716 C21orf62-AS1Q17RA5 79 aa7.32□□□□□ -1.24
COPS3-216ENST00000579716 NBPF8Q3BBV2 869 aa7.32□□□□□ -1.24
COPS3-216ENST00000579716 NUGGCQ68CJ6 796 aa7.32□□□□□ -1.24
COPS3-216ENST00000579716 ITPRIPL1Q6GPH6 555 aa7.32□□□□□ -1.24
COPS3-216ENST00000579716 IQCA1Q86XH1 822 aa7.32□□□□□ -1.24
COPS3-216ENST00000579716 SPATS2Q86XZ4 545 aaKnown RBP7.32□□□□□ -1.24
COPS3-216ENST00000579716 FAM184AQ8NB25 1140 aa7.32□□□□□ -1.24
COPS3-216ENST00000579716 RIN3Q8TB24 985 aa7.32□□□□□ -1.24
COPS3-216ENST00000579716 SUN5Q8TC36 379 aa7.32□□□□□ -1.24
COPS3-216ENST00000579716 USP33Q8TEY7 942 aa7.32□□□□□ -1.24
COPS3-216ENST00000579716 HDAC7Q8WUI4 952 aa7.32□□□□□ -1.24
COPS3-216ENST00000579716 MTMR8Q96EF0 704 aa7.32□□□□□ -1.24
COPS3-216ENST00000579716 TSGA13Q96PP4 275 aa7.32□□□□□ -1.24
COPS3-216ENST00000579716 LSM14BQ9BX40 385 aaKnown RBP7.32□□□□□ -1.24
COPS3-216ENST00000579716 ELAC1Q9H777 363 aaKnown RBP7.32□□□□□ -1.24
COPS3-216ENST00000579716 VEZTQ9HBM0 779 aa7.32□□□□□ -1.24
COPS3-216ENST00000579716 PDP2Q9P2J9 529 aa7.32□□□□□ -1.24
COPS3-216ENST00000579716 MTRRQ9UBK8 725 aa7.32□□□□□ -1.24
COPS3-216ENST00000579716 CFDP1Q9UEE9 299 aaPredicted RBP7.32□□□□□ -1.24
COPS3-216ENST00000579716 RCAN3Q9UKA8 241 aa7.32□□□□□ -1.24
COPS3-216ENST00000579716 DUSP12Q9UNI6 340 aa7.32□□□□□ -1.24
COPS3-216ENST00000579716 FAM50BQ9Y247 325 aa7.32□□□□□ -1.24
COPS3-216ENST00000579716 SPEF1Q9Y4P9 236 aa7.32□□□□□ -1.24
COPS3-216ENST00000579716 ANGPTL3Q9Y5C1 460 aa7.32□□□□□ -1.24
COPS3-216ENST00000579716 ATAD2BQ9ULI0 1458 aa7.31□□□□□ -1.24
COPS3-216ENST00000579716 A0A087X0B3 334 aa7.31□□□□□ -1.24
COPS3-216ENST00000579716 FSD2A1L4K1 749 aa7.31□□□□□ -1.24
COPS3-216ENST00000579716 PDE8AO60658 829 aa7.31□□□□□ -1.24
COPS3-216ENST00000579716 CYP17A1P05093 508 aa7.31□□□□□ -1.24
COPS3-216ENST00000579716 EEF2P13639 858 aaKnown RBP7.31□□□□□ -1.24
COPS3-216ENST00000579716 RDXP35241 583 aaKnown RBP7.31□□□□□ -1.24
COPS3-216ENST00000579716 GNL1P36915 607 aaPredicted RBP7.31□□□□□ -1.24
COPS3-216ENST00000579716 FCGRTP55899 365 aa7.31□□□□□ -1.24
COPS3-216ENST00000579716 CACNB2Q08289 660 aaPredicted RBP7.31□□□□□ -1.24
COPS3-216ENST00000579716 RABEP1Q15276 862 aa7.31□□□□□ -1.24
COPS3-216ENST00000579716 CLUL1Q15846 466 aa7.31□□□□□ -1.24
COPS3-216ENST00000579716 CNGA3Q16281 694 aa7.31□□□□□ -1.24
COPS3-216ENST00000579716 PREPLQ4J6C6 727 aaPredicted RBP7.31□□□□□ -1.24
COPS3-216ENST00000579716 PPM1JQ5JR12 505 aa7.31□□□□□ -1.24
COPS3-216ENST00000579716 RASIP1Q5U651 963 aa7.31□□□□□ -1.24
COPS3-216ENST00000579716 RETSATQ6NUM9 610 aa7.31□□□□□ -1.24
COPS3-216ENST00000579716 PRR23BQ6ZRT6 265 aa7.31□□□□□ -1.24
COPS3-216ENST00000579716 RAPH1Q70E73 1250 aa7.31□□□□□ -1.24
COPS3-216ENST00000579716 RALYLQ86SE5 291 aaKnown RBP7.31□□□□□ -1.24
COPS3-216ENST00000579716 SULF2Q8IWU5 870 aa7.31□□□□□ -1.24
COPS3-216ENST00000579716 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.31□□□□□ -1.24
COPS3-216ENST00000579716 GRIN3AQ8TCU5 1115 aa7.31□□□□□ -1.24
COPS3-216ENST00000579716 CPLX3Q8WVH0 158 aa7.31□□□□□ -1.24
COPS3-216ENST00000579716 POF1BQ8WVV4 589 aa7.31□□□□□ -1.24
COPS3-216ENST00000579716 ZNF606Q8WXB4 792 aa7.31□□□□□ -1.24
COPS3-216ENST00000579716 ALKBH8Q96BT7 664 aaKnown RBP7.31□□□□□ -1.24
COPS3-216ENST00000579716 RBM18Q96H35 190 aaKnown RBP7.31□□□□□ -1.24
COPS3-216ENST00000579716 CSRNP1Q96S65 589 aa7.31□□□□□ -1.24
COPS3-216ENST00000579716 YIPF4Q9BSR8 244 aa7.31□□□□□ -1.24
COPS3-216ENST00000579716 KATNAL1Q9BW62 490 aa7.31□□□□□ -1.24
COPS3-216ENST00000579716 SLC7A5P2Q9GIP4 190 aa7.31□□□□□ -1.24
COPS3-216ENST00000579716 STARD7Q9NQZ5 370 aa7.31□□□□□ -1.24
COPS3-216ENST00000579716 MAN1C1Q9NR34 630 aa7.31□□□□□ -1.24
COPS3-216ENST00000579716 PAPOLBQ9NRJ5 636 aaKnown RBP7.31□□□□□ -1.24
COPS3-216ENST00000579716 ABCF3Q9NUQ8 709 aa7.31□□□□□ -1.24
COPS3-216ENST00000579716 NFKBIL1Q9UBC1 381 aaPredicted RBP7.31□□□□□ -1.24
COPS3-216ENST00000579716 GIMAP2Q9UG22 337 aa7.31□□□□□ -1.24
COPS3-216ENST00000579716 RNF123Q5XPI4 1314 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 PITPNM2Q9BZ72 1349 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 PNMA6FA0A0J9YX94 578 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 FAM155AB1AL88 458 aaPredicted RBP7.3□□□□□ -1.24
COPS3-216ENST00000579716 ELL2O00472 640 aaPredicted RBP7.3□□□□□ -1.24
COPS3-216ENST00000579716 SPTLC2O15270 562 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 MYO1BO43795 1136 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 CDKL5O76039 1030 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms