RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 CSF2RAP15509 400 aa17.22■□□□□ 0.35
IFT20-208ENST00000578985 RPA1P27694 616 aa17.22■□□□□ 0.35
IFT20-208ENST00000578985 YWHABP31946 246 aaKnown RBP17.22■□□□□ 0.35
IFT20-208ENST00000578985 CCT6AP40227 531 aaKnown RBP17.22■□□□□ 0.35
IFT20-208ENST00000578985 PPIGQ13427 754 aaKnown RBP eCLIP17.22■□□□□ 0.35
IFT20-208ENST00000578985 ZNF618Q5T7W0 954 aa17.22■□□□□ 0.35
IFT20-208ENST00000578985 HAUS3Q68CZ6 603 aa17.22■□□□□ 0.35
IFT20-208ENST00000578985 PLA2G4FQ68DD2 849 aa17.22■□□□□ 0.35
IFT20-208ENST00000578985 LRRC8DQ7L1W4 858 aa17.22■□□□□ 0.35
IFT20-208ENST00000578985 OTUD6AQ7L8S5 288 aa17.22■□□□□ 0.35
IFT20-208ENST00000578985 RSPH3Q86UC2 560 aa17.22■□□□□ 0.35
IFT20-208ENST00000578985 CATSPER3Q86XQ3 398 aa17.22■□□□□ 0.35
IFT20-208ENST00000578985 DNAJB3Q8WWF6 145 aa17.22■□□□□ 0.35
IFT20-208ENST00000578985 SCLYQ96I15 445 aa17.22■□□□□ 0.35
IFT20-208ENST00000578985 FAM49AQ9H0Q0 323 aaPredicted RBP17.22■□□□□ 0.35
IFT20-208ENST00000578985 ZDHHC9Q9Y397 364 aa17.22■□□□□ 0.35
IFT20-208ENST00000578985 SMIM35A0A1B0GVV1 85 aa17.21■□□□□ 0.35
IFT20-208ENST00000578985 PP2D1A8MPX8 630 aa17.21■□□□□ 0.35
IFT20-208ENST00000578985 ZBTB39O15060 712 aa17.21■□□□□ 0.35
IFT20-208ENST00000578985 RPLP2P05387 115 aaKnown RBP17.21■□□□□ 0.35
IFT20-208ENST00000578985 NPEPPSP55786 919 aa17.21■□□□□ 0.35
IFT20-208ENST00000578985 TBC1D8BQ0IIM8 1120 aa17.21■□□□□ 0.35
IFT20-208ENST00000578985 FOXD4L6Q3SYB3 417 aaPredicted RBP17.21■□□□□ 0.35
IFT20-208ENST00000578985 KRT79Q5XKE5 535 aa17.21■□□□□ 0.35
IFT20-208ENST00000578985 FOXD4L3Q6VB84 417 aaPredicted RBP17.21■□□□□ 0.35
IFT20-208ENST00000578985 CHRDL2Q6WN34 429 aa17.21■□□□□ 0.35
IFT20-208ENST00000578985 RPAINQ86UA6 219 aa17.21■□□□□ 0.35
IFT20-208ENST00000578985 METTL13Q8N6R0 699 aa17.21■□□□□ 0.35
IFT20-208ENST00000578985 SNX29Q8TEQ0 813 aa17.21■□□□□ 0.35
IFT20-208ENST00000578985 CEP170P1Q96L14 293 aa17.21■□□□□ 0.35
IFT20-208ENST00000578985 SH2D3AQ9BRG2 576 aa17.21■□□□□ 0.35
IFT20-208ENST00000578985 UBE2OQ9C0C9 1292 aaKnown RBP17.21■□□□□ 0.35
IFT20-208ENST00000578985 CYP26B1Q9NR63 512 aa17.21■□□□□ 0.35
IFT20-208ENST00000578985 ANKEF1Q9NU02 776 aa17.21■□□□□ 0.35
IFT20-208ENST00000578985 TFIP11Q9UBB9 837 aaKnown RBP17.21■□□□□ 0.35
IFT20-208ENST00000578985 DAXXQ9UER7 740 aaPredicted RBP17.21■□□□□ 0.35
IFT20-208ENST00000578985 LOXHD1Q8IVV2 1947 aa17.2■□□□□ 0.34
IFT20-208ENST00000578985 RSPH10B2B2RC85 870 aa17.2■□□□□ 0.34
IFT20-208ENST00000578985 CTSHP09668 335 aa17.2■□□□□ 0.34
IFT20-208ENST00000578985 RSPH10BP0C881 870 aa17.2■□□□□ 0.34
IFT20-208ENST00000578985 XRCC6P12956 609 aaKnown RBP eCLIP17.2■□□□□ 0.34
IFT20-208ENST00000578985 MUTP22033 750 aa17.2■□□□□ 0.34
IFT20-208ENST00000578985 MARCKSP29966 332 aaPredicted RBP17.2■□□□□ 0.34
IFT20-208ENST00000578985 CDC25AP30304 524 aa17.2■□□□□ 0.34
IFT20-208ENST00000578985 BMP8BP34820 402 aa17.2■□□□□ 0.34
IFT20-208ENST00000578985 RFC2P35250 354 aa17.2■□□□□ 0.34
IFT20-208ENST00000578985 NASPP49321 788 aaPredicted RBP17.2■□□□□ 0.34
IFT20-208ENST00000578985 SLC39A14Q15043 492 aa17.2■□□□□ 0.34
IFT20-208ENST00000578985 STK38Q15208 465 aa17.2■□□□□ 0.34
IFT20-208ENST00000578985 XKR9Q5GH70 373 aa17.2■□□□□ 0.34
IFT20-208ENST00000578985 EFCAB12Q6NXP0 572 aa17.2■□□□□ 0.34
IFT20-208ENST00000578985 TRAF7Q6Q0C0 670 aa17.2■□□□□ 0.34
IFT20-208ENST00000578985 NACC1Q96RE7 527 aa17.2■□□□□ 0.34
IFT20-208ENST00000578985 CEP89Q96ST8 783 aa17.2■□□□□ 0.34
IFT20-208ENST00000578985 IL23AQ9NPF7 189 aa17.2■□□□□ 0.34
IFT20-208ENST00000578985 TET1Q8NFU7 2136 aa17.2■□□□□ 0.34
IFT20-208ENST00000578985 A0A087WWV3 80 aa17.19■□□□□ 0.34
IFT20-208ENST00000578985 PARNO95453 639 aaKnown RBP17.19■□□□□ 0.34
IFT20-208ENST00000578985 LONP1P36776 959 aaKnown RBP17.19■□□□□ 0.34
IFT20-208ENST00000578985 EPHB4P54760 987 aa17.19■□□□□ 0.34
IFT20-208ENST00000578985 MRPS6P82932 125 aaKnown RBP17.19■□□□□ 0.34
IFT20-208ENST00000578985 FAM26DQ5JW98 314 aa17.19■□□□□ 0.34
IFT20-208ENST00000578985 ATL3Q6DD88 541 aa17.19■□□□□ 0.34
IFT20-208ENST00000578985 POTEGQ6S5H5 508 aa17.19■□□□□ 0.34
IFT20-208ENST00000578985 RPUSD2Q8IZ73 545 aaKnown RBP17.19■□□□□ 0.34
IFT20-208ENST00000578985 KIAA0319LQ8IZA0 1049 aa17.19■□□□□ 0.34
IFT20-208ENST00000578985 NME8Q8N427 588 aa17.19■□□□□ 0.34
IFT20-208ENST00000578985 ZNF579Q8NAF0 562 aaKnown RBP17.19■□□□□ 0.34
IFT20-208ENST00000578985 PIGOQ8TEQ8 1089 aa17.19■□□□□ 0.34
IFT20-208ENST00000578985 AK8Q96MA6 479 aa17.19■□□□□ 0.34
IFT20-208ENST00000578985 MMTAG2Q9BU76 263 aaKnown RBP17.19■□□□□ 0.34
IFT20-208ENST00000578985 SUGCTQ9HAC7 445 aa17.19■□□□□ 0.34
IFT20-208ENST00000578985 FBXO2Q9UK22 296 aaPredicted RBP17.19■□□□□ 0.34
IFT20-208ENST00000578985 PPME1Q9Y570 386 aa17.19■□□□□ 0.34
IFT20-208ENST00000578985 MORC2Q9Y6X9 1032 aaPredicted RBP17.19■□□□□ 0.34
IFT20-208ENST00000578985 TCHHQ07283 1943 aa17.19■□□□□ 0.34
IFT20-208ENST00000578985 CHRNA1P02708 482 aa17.18■□□□□ 0.34
IFT20-208ENST00000578985 ACRP10323 421 aa17.18■□□□□ 0.34
IFT20-208ENST00000578985 TMOD1P28289 359 aa17.18■□□□□ 0.34
IFT20-208ENST00000578985 CLCN3P51790 818 aa17.18■□□□□ 0.34
IFT20-208ENST00000578985 GRIN1Q05586 938 aa17.18■□□□□ 0.34
IFT20-208ENST00000578985 ECM1Q16610 540 aa17.18■□□□□ 0.34
IFT20-208ENST00000578985 DEFB128Q7Z7B8 93 aa17.18■□□□□ 0.34
IFT20-208ENST00000578985 EXOC8Q8IYI6 725 aa17.18■□□□□ 0.34
IFT20-208ENST00000578985 LRRC71Q8N4P6 559 aa17.18■□□□□ 0.34
IFT20-208ENST00000578985 LINC01465Q8N7H1 131 aa17.18■□□□□ 0.34
IFT20-208ENST00000578985 CCDC43Q96MW1 224 aaKnown RBP17.18■□□□□ 0.34
IFT20-208ENST00000578985 JPH2Q9BR39 696 aaPredicted RBP17.18■□□□□ 0.34
IFT20-208ENST00000578985 PRO3102Q9H379 93 aa17.18■□□□□ 0.34
IFT20-208ENST00000578985 KIAA1024Q9UPX6 916 aa17.18■□□□□ 0.34
IFT20-208ENST00000578985 SRPRBQ9Y5M8 271 aaKnown RBP17.18■□□□□ 0.34
IFT20-208ENST00000578985 CDY2AQ9Y6F7 541 aa17.18■□□□□ 0.34
IFT20-208ENST00000578985 SIP14410 1827 aa17.18■□□□□ 0.34
IFT20-208ENST00000578985 IGKV6-21A0A0C4DH24 114 aa17.17■□□□□ 0.34
IFT20-208ENST00000578985 M0QZ92 97 aa17.17■□□□□ 0.34
IFT20-208ENST00000578985 MAFO75444 373 aaPredicted RBP17.17■□□□□ 0.34
IFT20-208ENST00000578985 YEATS4O95619 227 aa17.17■□□□□ 0.34
IFT20-208ENST00000578985 DDIT3P35638 169 aa17.17■□□□□ 0.34
IFT20-208ENST00000578985 RFC5P40937 340 aa17.17■□□□□ 0.34
IFT20-208ENST00000578985 RARRES1P49788 294 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms