RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 ABHD14A-ACY1A0A1B0GW23 586 aa16.24■□□□□ 0.19
MKS1-207ENST00000578789 MAGEB2O15479 319 aa16.24■□□□□ 0.19
MKS1-207ENST00000578789 DKC1O60832 514 aaKnown RBP eCLIP16.24■□□□□ 0.19
MKS1-207ENST00000578789 P4HBP07237 508 aaKnown RBP16.24■□□□□ 0.19
MKS1-207ENST00000578789 ATP2B1P20020 1258 aa16.24■□□□□ 0.19
MKS1-207ENST00000578789 MCM7P33993 719 aa16.24■□□□□ 0.19
MKS1-207ENST00000578789 QARSP47897 775 aaKnown RBP16.24■□□□□ 0.19
MKS1-207ENST00000578789 WDR5P61964 334 aaKnown RBP16.24■□□□□ 0.19
MKS1-207ENST00000578789 IER5Q5VY09 327 aa16.24■□□□□ 0.19
MKS1-207ENST00000578789 NCAPH2Q6IBW4 605 aa16.24■□□□□ 0.19
MKS1-207ENST00000578789 BANK1Q8NDB2 785 aa16.24■□□□□ 0.19
MKS1-207ENST00000578789 DBF4BQ8NFT6 615 aa16.24■□□□□ 0.19
MKS1-207ENST00000578789 PHOSPHO2Q8TCD6 241 aa16.24■□□□□ 0.19
MKS1-207ENST00000578789 APBB2Q92870 758 aa16.24■□□□□ 0.19
MKS1-207ENST00000578789 SNX21Q969T3 373 aa16.24■□□□□ 0.19
MKS1-207ENST00000578789 CEP89Q96ST8 783 aa16.24■□□□□ 0.19
MKS1-207ENST00000578789 PBX4Q9BYU1 374 aa16.24■□□□□ 0.19
MKS1-207ENST00000578789 TTC12Q9H892 705 aaPredicted RBP16.24■□□□□ 0.19
MKS1-207ENST00000578789 PCDHA12Q9UN75 941 aa16.24■□□□□ 0.19
MKS1-207ENST00000578789 TRPV2Q9Y5S1 764 aa16.24■□□□□ 0.19
MKS1-207ENST00000578789 GRXCR1A8MXD5 290 aa16.23■□□□□ 0.19
MKS1-207ENST00000578789 K7ELQ4 463 aaPredicted RBP16.23■□□□□ 0.19
MKS1-207ENST00000578789 M0QZ92 97 aa16.23■□□□□ 0.19
MKS1-207ENST00000578789 OR52Z1P0C646 297 aa16.23■□□□□ 0.19
MKS1-207ENST00000578789 ATP2A2P16615 1042 aaKnown RBP16.23■□□□□ 0.19
MKS1-207ENST00000578789 DNAJB2P25686 324 aa16.23■□□□□ 0.19
MKS1-207ENST00000578789 LPIN1Q14693 890 aa16.23■□□□□ 0.19
MKS1-207ENST00000578789 RAB30Q15771 203 aa16.23■□□□□ 0.19
MKS1-207ENST00000578789 FBXO47Q5MNV8 452 aa16.23■□□□□ 0.19
MKS1-207ENST00000578789 TRMT1LQ7Z2T5 733 aaKnown RBP16.23■□□□□ 0.19
MKS1-207ENST00000578789 KIAA0319LQ8IZA0 1049 aa16.23■□□□□ 0.19
MKS1-207ENST00000578789 NEK9Q8TD19 979 aa16.23■□□□□ 0.19
MKS1-207ENST00000578789 SEPT8Q92599 483 aa16.23■□□□□ 0.19
MKS1-207ENST00000578789 INTS4Q96HW7 963 aaKnown RBP16.23■□□□□ 0.19
MKS1-207ENST00000578789 SEPT9Q9UHD8 586 aaPredicted RBP16.23■□□□□ 0.19
MKS1-207ENST00000578789 SQORQ9Y6N5 450 aa16.23■□□□□ 0.19
MKS1-207ENST00000578789 H3BQV1 296 aa16.22■□□□□ 0.19
MKS1-207ENST00000578789 GHRP10912 638 aa16.22■□□□□ 0.19
MKS1-207ENST00000578789 TXKP42681 527 aa16.22■□□□□ 0.19
MKS1-207ENST00000578789 KCNJ6P48051 423 aa16.22■□□□□ 0.19
MKS1-207ENST00000578789 TOB1P50616 345 aaPredicted RBP16.22■□□□□ 0.19
MKS1-207ENST00000578789 IKBKEQ14164 716 aa16.22■□□□□ 0.19
MKS1-207ENST00000578789 ZNF174Q15697 407 aa16.22■□□□□ 0.19
MKS1-207ENST00000578789 ZNF697Q5TEC3 545 aa16.22■□□□□ 0.19
MKS1-207ENST00000578789 TSHZ1Q6ZSZ6 1077 aa16.22■□□□□ 0.19
MKS1-207ENST00000578789 ANO5Q75V66 913 aa16.22■□□□□ 0.19
MKS1-207ENST00000578789 C4orf19Q8IY42 314 aa16.22■□□□□ 0.19
MKS1-207ENST00000578789 LXNQ9BS40 222 aa16.22■□□□□ 0.19
MKS1-207ENST00000578789 IFIH1Q9BYX4 1025 aaKnown RBP16.22■□□□□ 0.19
MKS1-207ENST00000578789 CELF4Q9BZC1 486 aaKnown RBP16.22■□□□□ 0.19
MKS1-207ENST00000578789 WRAP73Q9P2S5 460 aaPredicted RBP16.22■□□□□ 0.19
MKS1-207ENST00000578789 PPME1Q9Y570 386 aa16.22■□□□□ 0.19
MKS1-207ENST00000578789 IGKV6-21A0A0C4DH24 114 aa16.21■□□□□ 0.19
MKS1-207ENST00000578789 TMEM150BA6NC51 233 aa16.21■□□□□ 0.19
MKS1-207ENST00000578789 RBAK-RBAKDNI3L0D1 243 aa16.21■□□□□ 0.19
MKS1-207ENST00000578789 LYPLA2O95372 231 aa16.21■□□□□ 0.19
MKS1-207ENST00000578789 PBX2P40425 430 aa16.21■□□□□ 0.19
MKS1-207ENST00000578789 CLCN3P51790 818 aa16.21■□□□□ 0.19
MKS1-207ENST00000578789 TBC1D8BQ0IIM8 1120 aa16.21■□□□□ 0.19
MKS1-207ENST00000578789 TMEM62Q0P6H9 643 aa16.21■□□□□ 0.19
MKS1-207ENST00000578789 NBR1Q14596 966 aa16.21■□□□□ 0.19
MKS1-207ENST00000578789 LARP1BQ659C4 914 aaKnown RBP16.21■□□□□ 0.19
MKS1-207ENST00000578789 MCTP1Q6DN14 999 aa16.21■□□□□ 0.19
MKS1-207ENST00000578789 Q7L0L9 218 aa16.21■□□□□ 0.19
MKS1-207ENST00000578789 HERC6Q8IVU3 1022 aa16.21■□□□□ 0.19
MKS1-207ENST00000578789 DEFB123Q8N688 67 aa16.21■□□□□ 0.19
MKS1-207ENST00000578789 C4orf32Q8N8J7 132 aa16.21■□□□□ 0.19
MKS1-207ENST00000578789 USP38Q8NB14 1042 aa16.21■□□□□ 0.19
MKS1-207ENST00000578789 TIFAQ96CG3 184 aa16.21■□□□□ 0.19
MKS1-207ENST00000578789 DYDC2Q96IM9 177 aa16.21■□□□□ 0.19
MKS1-207ENST00000578789 HSD17B14Q9BPX1 270 aa16.21■□□□□ 0.19
MKS1-207ENST00000578789 ZSWIM4Q9H7M6 989 aa16.21■□□□□ 0.19
MKS1-207ENST00000578789 RGL1Q9NZL6 768 aa16.21■□□□□ 0.19
MKS1-207ENST00000578789 PCDHA11Q9Y5I1 949 aa16.21■□□□□ 0.19
MKS1-207ENST00000578789 POTEMA6NI47 508 aa16.2■□□□□ 0.18
MKS1-207ENST00000578789 DEFB103AP81534 67 aa16.2■□□□□ 0.18
MKS1-207ENST00000578789 CYP4A11Q02928 519 aa16.2■□□□□ 0.18
MKS1-207ENST00000578789 MTERF2Q49AM1 385 aa16.2■□□□□ 0.18
MKS1-207ENST00000578789 RILPL1Q5EBL4 403 aa16.2■□□□□ 0.18
MKS1-207ENST00000578789 PLA2G4FQ68DD2 849 aa16.2■□□□□ 0.18
MKS1-207ENST00000578789 EFCAB12Q6NXP0 572 aa16.2■□□□□ 0.18
MKS1-207ENST00000578789 ZNF710Q8N1W2 664 aa16.2■□□□□ 0.18
MKS1-207ENST00000578789 EIF2AK1Q9BQI3 630 aaKnown RBP16.2■□□□□ 0.18
MKS1-207ENST00000578789 TTYH1Q9H313 450 aaPredicted RBP16.2■□□□□ 0.18
MKS1-207ENST00000578789 AGO3Q9H9G7 860 aaKnown RBP16.2■□□□□ 0.18
MKS1-207ENST00000578789 CYP26B1Q9NR63 512 aa16.2■□□□□ 0.18
MKS1-207ENST00000578789 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.2■□□□□ 0.18
MKS1-207ENST00000578789 MSRAQ9UJ68 235 aa16.2■□□□□ 0.18
MKS1-207ENST00000578789 YBX2Q9Y2T7 364 aaKnown RBP16.2■□□□□ 0.18
MKS1-207ENST00000578789 PCDHB6Q9Y5E3 794 aa16.2■□□□□ 0.18
MKS1-207ENST00000578789 COL4A6Q14031 1691 aa16.19■□□□□ 0.18
MKS1-207ENST00000578789 DDX11L8A8MPP1 907 aa16.19■□□□□ 0.18
MKS1-207ENST00000578789 GPR32O75388 356 aa16.19■□□□□ 0.18
MKS1-207ENST00000578789 SLITRK3O94933 977 aa16.19■□□□□ 0.18
MKS1-207ENST00000578789 PDCP20941 246 aa16.19■□□□□ 0.18
MKS1-207ENST00000578789 TMOD1P28289 359 aa16.19■□□□□ 0.18
MKS1-207ENST00000578789 RABGGTBP53611 331 aa16.19■□□□□ 0.18
MKS1-207ENST00000578789 CTTNQ14247 550 aaKnown RBP16.19■□□□□ 0.18
MKS1-207ENST00000578789 FAM43BQ6ZT52 329 aaPredicted RBP16.19■□□□□ 0.18
MKS1-207ENST00000578789 LRRC71Q8N4P6 559 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms