RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 TSHZ3Q63HK5 1081 aa8.31□□□□□ -1.08
CDK5RAP3-209ENST00000578663 TRIM50Q86XT4 487 aa8.31□□□□□ -1.08
CDK5RAP3-209ENST00000578663 SMC5Q8IY18 1101 aa8.31□□□□□ -1.08
CDK5RAP3-209ENST00000578663 MAML2Q8IZL2 1156 aaPredicted RBP8.31□□□□□ -1.08
CDK5RAP3-209ENST00000578663 ZDHHC14Q8IZN3 488 aa8.31□□□□□ -1.08
CDK5RAP3-209ENST00000578663 IL31RAQ8NI17 732 aa8.31□□□□□ -1.08
CDK5RAP3-209ENST00000578663 GPR20Q99678 358 aa8.31□□□□□ -1.08
CDK5RAP3-209ENST00000578663 AMNQ9BXJ7 453 aa8.31□□□□□ -1.08
CDK5RAP3-209ENST00000578663 UBA5Q9GZZ9 404 aa8.31□□□□□ -1.08
CDK5RAP3-209ENST00000578663 TUBE1Q9UJT0 475 aa8.31□□□□□ -1.08
CDK5RAP3-209ENST00000578663 USTQ9Y2C2 406 aa8.31□□□□□ -1.08
CDK5RAP3-209ENST00000578663 CDY2AQ9Y6F7 541 aa8.31□□□□□ -1.08
CDK5RAP3-209ENST00000578663 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 POTEMA6NI47 508 aa8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 PER2O15055 1255 aa8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 FIBPO43427 364 aa8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 FGF18O76093 207 aa8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 GOLGA8HP0CJ92 632 aa8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 NCLP19338 710 aaKnown RBP8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 TECP42680 631 aa8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 MTHFRP42898 656 aa8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 MRPS6P82932 125 aaKnown RBP8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 TRAF1Q13077 416 aa8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 CCDC6Q16204 474 aa8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 PAN2Q504Q3 1202 aaKnown RBP8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 RRP12Q5JTH9 1297 aaKnown RBP8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 VPS53Q5VIR6 699 aa8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 CES5AQ6NT32 575 aa8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 POTEGQ6S5H5 508 aa8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 RUFY4Q6ZNE9 571 aa8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 TICAM2Q86XR7 235 aa8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 PLCD3Q8N3E9 789 aa8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 TDRD5Q8NAT2 981 aaKnown RBP8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 PNMA1Q8ND90 353 aa8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 PI4K2BQ8TCG2 481 aa8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 MICAL1Q8TDZ2 1067 aa8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 CASP10Q92851 521 aa8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 SENP7Q9BQF6 1050 aa8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 ADAM7Q9H2U9 754 aa8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 CPVLQ9H3G5 476 aa8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 RNF41Q9H4P4 317 aaPredicted RBP8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 AGO3Q9H9G7 860 aaKnown RBP8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 NGRNQ9NPE2 291 aaKnown RBP8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 PPP4R2Q9NY27 417 aa8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 DLGAP2Q9P1A6 1054 aa8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 CDH22Q9UJ99 828 aa8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 GREB1Q4ZG55 1949 aa8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 FNDC1Q4ZHG4 1894 aaPredicted RBP8.3□□□□□ -1.08
CDK5RAP3-209ENST00000578663 IGSF9BQ9UPX0 1349 aa8.29□□□□□ -1.08
CDK5RAP3-209ENST00000578663 KDM3AQ9Y4C1 1321 aa8.29□□□□□ -1.08
CDK5RAP3-209ENST00000578663 LOXHD1Q8IVV2 1947 aa8.29□□□□□ -1.08
CDK5RAP3-209ENST00000578663 TMEM8BA6NDV4 472 aa8.29□□□□□ -1.08
CDK5RAP3-209ENST00000578663 SPATA31C2B4DYI2 1134 aa8.29□□□□□ -1.08
CDK5RAP3-209ENST00000578663 SORBS3O60504 671 aa8.29□□□□□ -1.08
CDK5RAP3-209ENST00000578663 FGAP02671 866 aa8.29□□□□□ -1.08
CDK5RAP3-209ENST00000578663 LAG3P18627 525 aa8.29□□□□□ -1.08
CDK5RAP3-209ENST00000578663 CD52P31358 61 aa8.29□□□□□ -1.08
CDK5RAP3-209ENST00000578663 SARSP49591 514 aaKnown RBP8.29□□□□□ -1.08
CDK5RAP3-209ENST00000578663 ERVFC1P60507 584 aa8.29□□□□□ -1.08
CDK5RAP3-209ENST00000578663 PLCB3Q01970 1234 aa8.29□□□□□ -1.08
CDK5RAP3-209ENST00000578663 PPFIA1Q13136 1202 aa8.29□□□□□ -1.08
CDK5RAP3-209ENST00000578663 ANKRD45Q5TZF3 282 aa8.29□□□□□ -1.08
CDK5RAP3-209ENST00000578663 IER5Q5VY09 327 aa8.29□□□□□ -1.08
CDK5RAP3-209ENST00000578663 RTN4RL1Q86UN2 441 aaPredicted RBP8.29□□□□□ -1.08
CDK5RAP3-209ENST00000578663 ESR2Q92731 530 aa8.29□□□□□ -1.08
CDK5RAP3-209ENST00000578663 GPKOWQ92917 476 aaPredicted RBP eCLIP8.29□□□□□ -1.08
CDK5RAP3-209ENST00000578663 MTMR8Q96EF0 704 aa8.29□□□□□ -1.08
CDK5RAP3-209ENST00000578663 CCDC136Q96JN2 1154 aa8.29□□□□□ -1.08
CDK5RAP3-209ENST00000578663 POMKQ9H5K3 350 aa8.29□□□□□ -1.08
CDK5RAP3-209ENST00000578663 JMJD4Q9H9V9 463 aa8.29□□□□□ -1.08
CDK5RAP3-209ENST00000578663 TSHZ2Q9NRE2 1034 aa8.29□□□□□ -1.08
CDK5RAP3-209ENST00000578663 PUF60Q9UHX1 559 aaKnown RBP8.29□□□□□ -1.08
CDK5RAP3-209ENST00000578663 SMG5Q9UPR3 1016 aaKnown RBP8.29□□□□□ -1.08
CDK5RAP3-209ENST00000578663 ABCA12Q86UK0 2595 aa8.29□□□□□ -1.08
CDK5RAP3-209ENST00000578663 LAMA4Q16363 1823 aa8.29□□□□□ -1.08
CDK5RAP3-209ENST00000578663 ASXL3Q9C0F0 2248 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 RRN3P2A6NIE6 340 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 SPTLC1O15269 473 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 DHX16O60231 1041 aaKnown RBP8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 GDF9O60383 454 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 PARP1P09874 1014 aaKnown RBP8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 PPM1AP35813 382 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 NUCB1Q02818 461 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 PAK2Q13177 524 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 SEMA3FQ13275 785 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 GRIK4Q16099 956 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 KIAA1841Q6NSI8 718 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 XRRA1Q6P2D8 792 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 MFSD6Q6ZSS7 791 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 CENPQQ7L2Z9 268 aaPredicted RBP8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 CYFIP1Q7L576 1253 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 PDZD3Q86UT5 571 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 IQCA1Q86XH1 822 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 THNSL1Q8IYQ7 743 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 SIX5Q8N196 739 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 COLGALT1Q8NBJ5 622 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 GIMAP8Q8ND71 665 aaPredicted RBP8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 OTUD7AQ8TE49 926 aaPredicted RBP8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 DNAJB3Q8WWF6 145 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 MRPS27Q92552 414 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms