RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 CLIC4Q9Y696 253 aa12.9□□□□□ -0.34
ERBB2-208ENST00000578630 DNAH12Q6ZR08 3092 aa12.9□□□□□ -0.35
ERBB2-208ENST00000578630 VWA3AA6NCI4 1184 aa12.89□□□□□ -0.35
ERBB2-208ENST00000578630 STBD1O95210 358 aa12.89□□□□□ -0.35
ERBB2-208ENST00000578630 PFKMP08237 780 aa12.89□□□□□ -0.35
ERBB2-208ENST00000578630 CSF2RAP15509 400 aa12.89□□□□□ -0.35
ERBB2-208ENST00000578630 CCT6AP40227 531 aaKnown RBP12.89□□□□□ -0.35
ERBB2-208ENST00000578630 NUCB2P80303 420 aa12.89□□□□□ -0.35
ERBB2-208ENST00000578630 CDC42EP1Q00587 391 aa12.89□□□□□ -0.35
ERBB2-208ENST00000578630 CEBPZQ03701 1054 aaKnown RBP12.89□□□□□ -0.35
ERBB2-208ENST00000578630 TARBP2Q15633 366 aaKnown RBP12.89□□□□□ -0.35
ERBB2-208ENST00000578630 TRIM71Q2Q1W2 868 aaKnown RBP12.89□□□□□ -0.35
ERBB2-208ENST00000578630 XKR9Q5GH70 373 aa12.89□□□□□ -0.35
ERBB2-208ENST00000578630 ZNF618Q5T7W0 954 aa12.89□□□□□ -0.35
ERBB2-208ENST00000578630 EFCAB12Q6NXP0 572 aa12.89□□□□□ -0.35
ERBB2-208ENST00000578630 CHRDL2Q6WN34 429 aa12.89□□□□□ -0.35
ERBB2-208ENST00000578630 ANO5Q75V66 913 aa12.89□□□□□ -0.35
ERBB2-208ENST00000578630 CATSPER3Q86XQ3 398 aa12.89□□□□□ -0.35
ERBB2-208ENST00000578630 DHX38Q92620 1227 aaKnown RBP12.89□□□□□ -0.35
ERBB2-208ENST00000578630 SCLYQ96I15 445 aa12.89□□□□□ -0.35
ERBB2-208ENST00000578630 AK8Q96MA6 479 aa12.89□□□□□ -0.35
ERBB2-208ENST00000578630 CCDC43Q96MW1 224 aaKnown RBP12.89□□□□□ -0.35
ERBB2-208ENST00000578630 FTOQ9C0B1 505 aaKnown RBP eCLIP12.89□□□□□ -0.35
ERBB2-208ENST00000578630 FAM49AQ9H0Q0 323 aaPredicted RBP12.89□□□□□ -0.35
ERBB2-208ENST00000578630 SUGCTQ9HAC7 445 aa12.89□□□□□ -0.35
ERBB2-208ENST00000578630 IL23AQ9NPF7 189 aa12.89□□□□□ -0.35
ERBB2-208ENST00000578630 CYP26B1Q9NR63 512 aa12.89□□□□□ -0.35
ERBB2-208ENST00000578630 MYH9P35579 1960 aaKnown RBP12.89□□□□□ -0.35
ERBB2-208ENST00000578630 UMODL1Q5DID0 1318 aa12.88□□□□□ -0.35
ERBB2-208ENST00000578630 ZBTB42B2RXF5 422 aa12.88□□□□□ -0.35
ERBB2-208ENST00000578630 BRD1O95696 1058 aa12.88□□□□□ -0.35
ERBB2-208ENST00000578630 FGBP02675 491 aa12.88□□□□□ -0.35
ERBB2-208ENST00000578630 SPATA31C1P0DKV0 1188 aa12.88□□□□□ -0.35
ERBB2-208ENST00000578630 LONP1P36776 959 aaKnown RBP12.88□□□□□ -0.35
ERBB2-208ENST00000578630 UBA7P41226 1012 aa12.88□□□□□ -0.35
ERBB2-208ENST00000578630 SLC39A14Q15043 492 aa12.88□□□□□ -0.35
ERBB2-208ENST00000578630 STK38Q15208 465 aa12.88□□□□□ -0.35
ERBB2-208ENST00000578630 IL17AQ16552 155 aa12.88□□□□□ -0.35
ERBB2-208ENST00000578630 FAM26DQ5JW98 314 aa12.88□□□□□ -0.35
ERBB2-208ENST00000578630 RUFY4Q6ZNE9 571 aa12.88□□□□□ -0.35
ERBB2-208ENST00000578630 KIAA0319LQ8IZA0 1049 aa12.88□□□□□ -0.35
ERBB2-208ENST00000578630 KCTD17Q8N5Z5 321 aa12.88□□□□□ -0.35
ERBB2-208ENST00000578630 SNX29Q8TEQ0 813 aa12.88□□□□□ -0.35
ERBB2-208ENST00000578630 SLC7A3Q8WY07 619 aa12.88□□□□□ -0.35
ERBB2-208ENST00000578630 USP28Q96RU2 1077 aa12.88□□□□□ -0.35
ERBB2-208ENST00000578630 MAP7D2Q96T17 732 aa12.88□□□□□ -0.35
ERBB2-208ENST00000578630 WNT8AQ9H1J5 351 aa12.88□□□□□ -0.35
ERBB2-208ENST00000578630 TFIP11Q9UBB9 837 aaKnown RBP12.88□□□□□ -0.35
ERBB2-208ENST00000578630 DNM3Q9UQ16 869 aa12.88□□□□□ -0.35
ERBB2-208ENST00000578630 ALPK3Q96L96 1907 aa12.88□□□□□ -0.35
ERBB2-208ENST00000578630 CEP290O15078 2479 aa12.87□□□□□ -0.35
ERBB2-208ENST00000578630 SLC26A4O43511 780 aa12.87□□□□□ -0.35
ERBB2-208ENST00000578630 MAFO75444 373 aaPredicted RBP12.87□□□□□ -0.35
ERBB2-208ENST00000578630 MED24O75448 989 aa12.87□□□□□ -0.35
ERBB2-208ENST00000578630 C22orf31O95567 290 aa12.87□□□□□ -0.35
ERBB2-208ENST00000578630 ACTN1P12814 892 aa12.87□□□□□ -0.35
ERBB2-208ENST00000578630 RFC5P40937 340 aa12.87□□□□□ -0.35
ERBB2-208ENST00000578630 NPEPPSP55786 919 aa12.87□□□□□ -0.35
ERBB2-208ENST00000578630 PKP1Q13835 747 aa12.87□□□□□ -0.35
ERBB2-208ENST00000578630 PTPAQ15257 358 aa12.87□□□□□ -0.35
ERBB2-208ENST00000578630 PSRC1Q6PGN9 363 aaPredicted RBP12.87□□□□□ -0.35
ERBB2-208ENST00000578630 DEFB128Q7Z7B8 93 aa12.87□□□□□ -0.35
ERBB2-208ENST00000578630 WNT8BQ93098 351 aa12.87□□□□□ -0.35
ERBB2-208ENST00000578630 CDK5RAP3Q96JB5 506 aa12.87□□□□□ -0.35
ERBB2-208ENST00000578630 MTIF3Q9H2K0 278 aaKnown RBP12.87□□□□□ -0.35
ERBB2-208ENST00000578630 WRAP73Q9P2S5 460 aaPredicted RBP12.87□□□□□ -0.35
ERBB2-208ENST00000578630 KIAA1024Q9UPX6 916 aa12.87□□□□□ -0.35
ERBB2-208ENST00000578630 SRPRBQ9Y5M8 271 aaKnown RBP12.87□□□□□ -0.35
ERBB2-208ENST00000578630 MORC2Q9Y6X9 1032 aaPredicted RBP12.87□□□□□ -0.35
ERBB2-208ENST00000578630 TRIP12Q14669 1992 aaPredicted RBP12.87□□□□□ -0.35
ERBB2-208ENST00000578630 A0A1W2PPC1 479 aa12.86□□□□□ -0.35
ERBB2-208ENST00000578630 ZBTB39O15060 712 aa12.86□□□□□ -0.35
ERBB2-208ENST00000578630 GAS2O43903 313 aaKnown RBP12.86□□□□□ -0.35
ERBB2-208ENST00000578630 DGAT1O75907 488 aa12.86□□□□□ -0.35
ERBB2-208ENST00000578630 YEATS4O95619 227 aa12.86□□□□□ -0.35
ERBB2-208ENST00000578630 CTSHP09668 335 aa12.86□□□□□ -0.35
ERBB2-208ENST00000578630 ACRP10323 421 aa12.86□□□□□ -0.35
ERBB2-208ENST00000578630 MARCKSP29966 332 aaPredicted RBP12.86□□□□□ -0.35
ERBB2-208ENST00000578630 CDC25AP30304 524 aa12.86□□□□□ -0.35
ERBB2-208ENST00000578630 NASPP49321 788 aaPredicted RBP12.86□□□□□ -0.35
ERBB2-208ENST00000578630 POLGP54098 1239 aaPredicted RBP12.86□□□□□ -0.35
ERBB2-208ENST00000578630 MRPS6P82932 125 aaKnown RBP12.86□□□□□ -0.35
ERBB2-208ENST00000578630 ZRSR1Q15695 479 aaKnown RBP12.86□□□□□ -0.35
ERBB2-208ENST00000578630 FOXD4L6Q3SYB3 417 aaPredicted RBP12.86□□□□□ -0.35
ERBB2-208ENST00000578630 ODR4Q5SWX8 454 aa12.86□□□□□ -0.35
ERBB2-208ENST00000578630 PLA2G4FQ68DD2 849 aa12.86□□□□□ -0.35
ERBB2-208ENST00000578630 FOXD4L3Q6VB84 417 aaPredicted RBP12.86□□□□□ -0.35
ERBB2-208ENST00000578630 KRI1Q8N9T8 703 aaKnown RBP12.86□□□□□ -0.35
ERBB2-208ENST00000578630 USP38Q8NB14 1042 aa12.86□□□□□ -0.35
ERBB2-208ENST00000578630 LINC00301Q8NCQ3 95 aa12.86□□□□□ -0.35
ERBB2-208ENST00000578630 PIGOQ8TEQ8 1089 aa12.86□□□□□ -0.35
ERBB2-208ENST00000578630 TCP11Q8WWU5 503 aa12.86□□□□□ -0.35
ERBB2-208ENST00000578630 ZBTB10Q96DT7 871 aa12.86□□□□□ -0.35
ERBB2-208ENST00000578630 CALML4Q96GE6 196 aa12.86□□□□□ -0.35
ERBB2-208ENST00000578630 SH2D3AQ9BRG2 576 aa12.86□□□□□ -0.35
ERBB2-208ENST00000578630 CELF4Q9BZC1 486 aaKnown RBP12.86□□□□□ -0.35
ERBB2-208ENST00000578630 NT5C3AQ9H0P0 336 aa12.86□□□□□ -0.35
ERBB2-208ENST00000578630 DBR1Q9UK59 544 aaKnown RBP12.86□□□□□ -0.35
ERBB2-208ENST00000578630 COLQQ9Y215 455 aaPredicted RBP12.86□□□□□ -0.35
ERBB2-208ENST00000578630 AKT3Q9Y243 479 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms