RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 NFRKBQ6P4R8 1299 aa10.24□□□□□ -0.77
CDK5RAP3-208ENST00000578525 CDAN1Q8IWY9 1227 aa10.24□□□□□ -0.77
CDK5RAP3-208ENST00000578525 MYCT1Q8N699 235 aa10.24□□□□□ -0.77
CDK5RAP3-208ENST00000578525 COG1Q8WTW3 980 aa10.24□□□□□ -0.77
CDK5RAP3-208ENST00000578525 SPAG5Q96R06 1193 aa10.24□□□□□ -0.77
CDK5RAP3-208ENST00000578525 VIPAS39Q9H9C1 493 aa10.24□□□□□ -0.77
CDK5RAP3-208ENST00000578525 PARVGQ9HBI0 331 aa10.24□□□□□ -0.77
CDK5RAP3-208ENST00000578525 PDE11AQ9HCR9 933 aa10.24□□□□□ -0.77
CDK5RAP3-208ENST00000578525 SIX2Q9NPC8 291 aa10.24□□□□□ -0.77
CDK5RAP3-208ENST00000578525 GINM1Q9NU53 330 aa10.24□□□□□ -0.77
CDK5RAP3-208ENST00000578525 FBXO28Q9NVF7 368 aa10.24□□□□□ -0.77
CDK5RAP3-208ENST00000578525 RNF216Q9NWF9 866 aaPredicted RBP10.24□□□□□ -0.77
CDK5RAP3-208ENST00000578525 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.24□□□□□ -0.77
CDK5RAP3-208ENST00000578525 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.24□□□□□ -0.77
CDK5RAP3-208ENST00000578525 RNF14Q9UBS8 474 aa10.24□□□□□ -0.77
CDK5RAP3-208ENST00000578525 SALL4Q9UJQ4 1053 aa10.24□□□□□ -0.77
CDK5RAP3-208ENST00000578525 CCPG1Q9ULG6 757 aa10.24□□□□□ -0.77
CDK5RAP3-208ENST00000578525 A0A087X0T9 212 aa10.23□□□□□ -0.77
CDK5RAP3-208ENST00000578525 SHTN1A0MZ66 631 aa10.23□□□□□ -0.77
CDK5RAP3-208ENST00000578525 WDR46O15213 610 aaKnown RBP10.23□□□□□ -0.77
CDK5RAP3-208ENST00000578525 CLIC2O15247 247 aa10.23□□□□□ -0.77
CDK5RAP3-208ENST00000578525 NCK2O43639 380 aa10.23□□□□□ -0.77
CDK5RAP3-208ENST00000578525 BUB1O43683 1085 aa10.23□□□□□ -0.77
CDK5RAP3-208ENST00000578525 PPP1R12BO60237 982 aaPredicted RBP10.23□□□□□ -0.77
CDK5RAP3-208ENST00000578525 FAM228BP0C875 321 aa10.23□□□□□ -0.77
CDK5RAP3-208ENST00000578525 UCHL3P15374 230 aa10.23□□□□□ -0.77
CDK5RAP3-208ENST00000578525 KCNA3P22001 575 aa10.23□□□□□ -0.77
CDK5RAP3-208ENST00000578525 CYP2C19P33261 490 aa10.23□□□□□ -0.77
CDK5RAP3-208ENST00000578525 PAFAH1B1P43034 410 aa10.23□□□□□ -0.77
CDK5RAP3-208ENST00000578525 CASP4P49662 377 aa10.23□□□□□ -0.77
CDK5RAP3-208ENST00000578525 NAP1L1P55209 391 aaKnown RBP10.23□□□□□ -0.77
CDK5RAP3-208ENST00000578525 TNIP1Q15025 636 aa10.23□□□□□ -0.77
CDK5RAP3-208ENST00000578525 TCERG1LQ5VWI1 586 aa10.23□□□□□ -0.77
CDK5RAP3-208ENST00000578525 CIAPIN1Q6FI81 312 aa10.23□□□□□ -0.77
CDK5RAP3-208ENST00000578525 SLC30A10Q6XR72 485 aa10.23□□□□□ -0.77
CDK5RAP3-208ENST00000578525 MIGA2Q7L4E1 593 aa10.23□□□□□ -0.77
CDK5RAP3-208ENST00000578525 MIER3Q7Z3K6 550 aa10.23□□□□□ -0.77
CDK5RAP3-208ENST00000578525 IRF2BP2Q7Z5L9 587 aa10.23□□□□□ -0.77
CDK5RAP3-208ENST00000578525 MCF2L2Q86YR7 1114 aa10.23□□□□□ -0.77
CDK5RAP3-208ENST00000578525 FAM186BQ8IYM0 893 aa10.23□□□□□ -0.77
CDK5RAP3-208ENST00000578525 SAMD3Q8N6K7 520 aa10.23□□□□□ -0.77
CDK5RAP3-208ENST00000578525 ANKRD13CQ8N6S4 541 aa10.23□□□□□ -0.77
CDK5RAP3-208ENST00000578525 GOLGA5Q8TBA6 731 aa10.23□□□□□ -0.77
CDK5RAP3-208ENST00000578525 SLC35C1Q96A29 364 aa10.23□□□□□ -0.77
CDK5RAP3-208ENST00000578525 BORCS6Q96GS4 357 aa10.23□□□□□ -0.77
CDK5RAP3-208ENST00000578525 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.23□□□□□ -0.771e-6■□□□□ 8
CDK5RAP3-208ENST00000578525 TLR10Q9BXR5 811 aa10.23□□□□□ -0.77
CDK5RAP3-208ENST00000578525 GLIS2Q9BZE0 524 aaPredicted RBP10.23□□□□□ -0.77
CDK5RAP3-208ENST00000578525 BCAS3Q9H6U6 928 aa10.23□□□□□ -0.77
CDK5RAP3-208ENST00000578525 DAAM1Q9Y4D1 1078 aa10.23□□□□□ -0.77
CDK5RAP3-208ENST00000578525 GRID2IPA4D2P6 1211 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 SFI1A8K8P3 1242 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 IPO5O00410 1097 aaKnown RBP10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 PALMO75781 387 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 GFPT2O94808 682 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 FERP16591 822 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 KLRC1P26715 233 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 INPP5BP32019 993 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 TNNT3P45378 269 aaPredicted RBP10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 JAM2P57087 298 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 ARID5AQ03989 594 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 CXCL9Q07325 125 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 KCNA1Q09470 495 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 MAPK7Q13164 816 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 ALCAMQ13740 583 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 IFI16Q16666 785 aaKnown RBP10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 SAMD1Q6SPF0 538 aaPredicted RBP10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 CCNI2Q6ZMN8 369 aaPredicted RBP10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 HS2ST1Q7LGA3 356 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 ZNF720Q7Z2F6 126 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 ZNF571Q7Z3V5 609 aaPredicted RBP10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 FAM178BQ8IXR5 827 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 SPATA4Q8NEY3 305 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 FAM71BQ8TC56 605 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 CLEC4DQ8WXI8 215 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 LPAR1Q92633 364 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 HOOK2Q96ED9 719 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 AGBL1Q96MI9 1066 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 FIZ1Q96SL8 496 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 LXNQ9BS40 222 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 ZNF341Q9BYN7 854 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 SUGCTQ9HAC7 445 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 POLD4Q9HCU8 107 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 DMAC2Q9NW81 257 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 GCNT4Q9P109 453 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 WRAP73Q9P2S5 460 aaPredicted RBP10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 ZHX1Q9UKY1 873 aaPredicted RBP10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 PNMA2Q9UL42 364 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 NENFQ9UMX5 172 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 PCDHB13Q9Y5F0 798 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 PCDHGC5Q9Y5F6 944 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 UBIAD1Q9Y5Z9 338 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 ZNF536O15090 1300 aa10.22□□□□□ -0.77
CDK5RAP3-208ENST00000578525 A0A0U1RQG5 324 aaPredicted RBP10.21□□□□□ -0.77
CDK5RAP3-208ENST00000578525 LRRIQ3A6PVS8 624 aaPredicted RBP10.21□□□□□ -0.77
CDK5RAP3-208ENST00000578525 PHF20L1A8MW92 1017 aa10.21□□□□□ -0.77
CDK5RAP3-208ENST00000578525 ZBTB39O15060 712 aa10.21□□□□□ -0.77
CDK5RAP3-208ENST00000578525 HIP1RO75146 1068 aa10.21□□□□□ -0.77
CDK5RAP3-208ENST00000578525 PPP1R37O75864 691 aa10.21□□□□□ -0.77
CDK5RAP3-208ENST00000578525 MAPTP10636 758 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms