RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	MAFB	Q9Y5Q3	323 aa	Predicted RBP	5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	CACNA1H	O95180	2353 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	FAM205C	A6NFA0	338 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	GOLGA8A	A7E2F4	631 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	GOLGA8B	A8MQT2	603 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	DDX39A	O00148	427 aa	Known RBP	5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	EML1	O00423	815 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	FSCN2	O14926	492 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	MSH4	O15457	936 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	MAFG	O15525	162 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	PRPF3	O43395	683 aa	Known RBP	5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	MBTPS2	O43462	519 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	CDC45	O75419	566 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	CSDE1	O75534	798 aa	Known RBP	5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	PSMD10	O75832	226 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	CTDNEP1	O95476	244 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	MMP1	P03956	469 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	CALM1	P0DP23	149 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	CALM2	P0DP24	149 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	CALM3	P0DP25	149 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	FGFR1	P11362	822 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	SCG2	P13521	617 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	RPS6KB1	P23443	525 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	HOXD11	P31277	338 aa	Predicted RBP	5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	PLA2G5	P39877	138 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	PBX3	P40426	434 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	STAT5B	P51692	787 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	AFF1	P51825	1210 aa	Known RBP	5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	ADCY7	P51828	1080 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	RCAN1	P53805	252 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	NAPA	P54920	295 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	ERVFC1	P60507	584 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	CLLU1OS	Q5K130	101 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	SWSAP1	Q6NVH7	229 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	PPP1R18	Q6NYC8	613 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329		Q6ZUG5	572 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	CENPQ	Q7L2Z9	268 aa	Predicted RBP	5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	ZNF598	Q86UK7	904 aa	Known RBP	5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	TMEM173	Q86WV6	379 aa	Predicted RBP	5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	PLA2G4D	Q86XP0	818 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	CMTR2	Q8IYT2	770 aa	Known RBP	5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	GJD3	Q8N144	294 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	KLHL23	Q8NBE8	558 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	BCL7C	Q8WUZ0	217 aa	Predicted RBP	5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	APBB2	Q92870	758 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	GLG1	Q92896	1179 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	CUL5	Q93034	780 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	ZNF668	Q96K58	619 aa	Predicted RBP	5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	PPP1R16B	Q96T49	567 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	YME1L1	Q96TA2	773 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	PHOX2B	Q99453	314 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	SH2D3A	Q9BRG2	576 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	VN1R3	Q9BXE9	311 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	ZSWIM6	Q9HCJ5	1215 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	SEC63	Q9UGP8	760 aa	Known RBP	5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	ZNF215	Q9UL58	517 aa	Predicted RBP	5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	TRPV2	Q9Y5S1	764 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	SQOR	Q9Y6N5	450 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	WDR87	Q6ZQQ6	2873 aa		5.08	□□□□□ -1.6
PPP4R1-209	ENST00000578329	MYH9	P35579	1960 aa	Known RBP	5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	KMT2E	Q8IZD2	1858 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	IGKV6-21	A0A0C4DH24	114 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	RRN3P2	A6NIE6	340 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	SPDYE3	A6NKU9	549 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	IPO5	O00410	1097 aa	Known RBP	5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	SLC37A4	O43826	429 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	CSPG5	O95196	566 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	LARGE1	O95461	756 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	TDP2	O95551	362 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	EYA4	O95677	639 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	VTN	P04004	478 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	RB1	P06400	928 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	FDPS	P14324	419 aa	Known RBP	5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	IFNAR1	P17181	557 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	FGFR4	P22455	802 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	CTNNB1	P35222	781 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	CLCN3	P51790	818 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	CCT2	P78371	535 aa	Known RBP	5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	TRAF1	Q13077	416 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	AP3B2	Q13367	1082 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	SMAD2	Q15796	467 aa	Known RBP	5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	CLUL1	Q15846	466 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	KIZ	Q2M2Z5	673 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	PAN2	Q504Q3	1202 aa	Known RBP	5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	KANK3	Q6NY19	840 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	SYCE2	Q6PIF2	218 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	POTEG	Q6S5H5	508 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	LRRC71	Q8N4P6	559 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	FIBCD1	Q8N539	461 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	GIMAP8	Q8ND71	665 aa	Predicted RBP	5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	ETNPPL	Q8TBG4	499 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	OXER1	Q8TDS5	423 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	SUSD6	Q92537	303 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	SLC5A5	Q92911	643 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	TNFRSF25	Q93038	417 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	P2RX5	Q93086	422 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	CDHR1	Q96JP9	859 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	JAKMIP1	Q96N16	626 aa	Known RBP	5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	SAMD11	Q96NU1	681 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	CASD1	Q96PB1	797 aa		5.07	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms