RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 C4orf19Q8IY42 314 aa12.47□□□□□ -0.41
CDK5RAP3-204ENST00000577664 FMR1NBQ8N0W7 255 aaPredicted RBP12.47□□□□□ -0.41
CDK5RAP3-204ENST00000577664 KLHDC9Q8NEP7 349 aa12.47□□□□□ -0.41
CDK5RAP3-204ENST00000577664 MRPS27Q92552 414 aaKnown RBP12.47□□□□□ -0.41
CDK5RAP3-204ENST00000577664 SPATA33Q96N06 139 aa12.47□□□□□ -0.41
CDK5RAP3-204ENST00000577664 PCYT2Q99447 389 aa12.47□□□□□ -0.41
CDK5RAP3-204ENST00000577664 PHOX2BQ99453 314 aa12.47□□□□□ -0.41
CDK5RAP3-204ENST00000577664 NT5C3AQ9H0P0 336 aa12.47□□□□□ -0.41
CDK5RAP3-204ENST00000577664 NKX2-4Q9H2Z4 354 aa12.47□□□□□ -0.41
CDK5RAP3-204ENST00000577664 FAM13BQ9NYF5 915 aa12.47□□□□□ -0.41
CDK5RAP3-204ENST00000577664 USP25Q9UHP3 1055 aa12.47□□□□□ -0.41
CDK5RAP3-204ENST00000577664 TCEAL9Q9UHQ7 104 aa12.47□□□□□ -0.41
CDK5RAP3-204ENST00000577664 PHF24Q9UPV7 400 aa12.47□□□□□ -0.41
CDK5RAP3-204ENST00000577664 MTCH2Q9Y6C9 303 aa12.47□□□□□ -0.41
CDK5RAP3-204ENST00000577664 GBF1Q92538 1859 aa12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 DCHS1Q96JQ0 3298 aa12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 KDM3AQ9Y4C1 1321 aa12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 GOLGA6L4A6NEF3 574 aa12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 DYNC1LI2O43237 492 aaPredicted RBP12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 ADAMTS4O75173 837 aa12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 STBD1O95210 358 aa12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 TIMP1P01033 207 aa12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 RARBP10826 455 aa12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 CDC25AP30304 524 aa12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 QARSP47897 775 aaKnown RBP12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 CPT1AP50416 773 aa12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 PSMC5P62195 406 aa12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 FAAP100Q0VG06 881 aa12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 GRB10Q13322 594 aa12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 LRRC41Q15345 812 aa12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 SKIV2LQ15477 1246 aaKnown RBP12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 E2F4Q16254 413 aa12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 TMEM119Q4V9L6 283 aa12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 NCAPH2Q6IBW4 605 aa12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 MFSD5Q6N075 450 aa12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 ANKRD33Q7Z3H0 272 aa12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 TLK2Q86UE8 772 aa12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 CABP7Q86V35 215 aa12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 MICALL1Q8N3F8 863 aa12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 HLA-CQ95604 372 aa12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 TIGD1Q96MW7 591 aa12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 PNMA5Q96PV4 448 aa12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 C16orf70Q9BSU1 422 aa12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 CUEDC2Q9H467 287 aa12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 ZSWIM4Q9H7M6 989 aa12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 TMEM39AQ9NV64 488 aa12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 CCDC39Q9UFE4 941 aa12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 KCNH3Q9ULD8 1083 aa12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 YBX2Q9Y2T7 364 aaKnown RBP12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 TELO2Q9Y4R8 837 aa12.46□□□□□ -0.41
CDK5RAP3-204ENST00000577664 IGSF9BQ9UPX0 1349 aa12.45□□□□□ -0.42
CDK5RAP3-204ENST00000577664 A0A1B0GVL5 298 aa12.45□□□□□ -0.42
CDK5RAP3-204ENST00000577664 PP2D1A8MPX8 630 aa12.45□□□□□ -0.42
CDK5RAP3-204ENST00000577664 MED24O75448 989 aa12.45□□□□□ -0.42
CDK5RAP3-204ENST00000577664 MMP3P08254 477 aa12.45□□□□□ -0.42
CDK5RAP3-204ENST00000577664 PFKFB1P16118 471 aa12.45□□□□□ -0.42
CDK5RAP3-204ENST00000577664 ATP4AP20648 1035 aa12.45□□□□□ -0.42
CDK5RAP3-204ENST00000577664 TCF7P36402 384 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP3-204ENST00000577664 TXLNAP40222 546 aa12.45□□□□□ -0.42
CDK5RAP3-204ENST00000577664 NDUFA8P51970 172 aa12.45□□□□□ -0.42
CDK5RAP3-204ENST00000577664 FAM160A1Q05DH4 1040 aa12.45□□□□□ -0.42
CDK5RAP3-204ENST00000577664 PPIGQ13427 754 aaKnown RBP eCLIP12.45□□□□□ -0.424e-9■■■■□ 23.9
CDK5RAP3-204ENST00000577664 ECM1Q16610 540 aa12.45□□□□□ -0.42
CDK5RAP3-204ENST00000577664 DGKDQ16760 1214 aa12.45□□□□□ -0.42
CDK5RAP3-204ENST00000577664 NAALADL2Q58DX5 795 aa12.45□□□□□ -0.42
CDK5RAP3-204ENST00000577664 SPECC1Q5M775 1068 aa12.45□□□□□ -0.42
CDK5RAP3-204ENST00000577664 SWSAP1Q6NVH7 229 aa12.45□□□□□ -0.42
CDK5RAP3-204ENST00000577664 CCDC73Q6ZRK6 1079 aa12.45□□□□□ -0.42
CDK5RAP3-204ENST00000577664 ERMP1Q7Z2K6 904 aa12.45□□□□□ -0.42
CDK5RAP3-204ENST00000577664 IQUBQ8NA54 791 aa12.45□□□□□ -0.42
CDK5RAP3-204ENST00000577664 OR6J1Q8NGC5 347 aa12.45□□□□□ -0.42
CDK5RAP3-204ENST00000577664 SNX29Q8TEQ0 813 aa12.45□□□□□ -0.42
CDK5RAP3-204ENST00000577664 AFG1LQ8WV93 481 aa12.45□□□□□ -0.42
CDK5RAP3-204ENST00000577664 CALML4Q96GE6 196 aa12.45□□□□□ -0.42
CDK5RAP3-204ENST00000577664 NACC1Q96RE7 527 aa12.45□□□□□ -0.42
CDK5RAP3-204ENST00000577664 UIMC1Q96RL1 719 aa12.45□□□□□ -0.42
CDK5RAP3-204ENST00000577664 TSEN34Q9BSV6 310 aaKnown RBP12.45□□□□□ -0.42
CDK5RAP3-204ENST00000577664 NIFKQ9BYG3 293 aaKnown RBP12.45□□□□□ -0.42
CDK5RAP3-204ENST00000577664 AP5M1Q9H0R1 490 aa12.45□□□□□ -0.42
CDK5RAP3-204ENST00000577664 GOLPH3LQ9H4A5 285 aa12.45□□□□□ -0.42
CDK5RAP3-204ENST00000577664 SMARCAD1Q9H4L7 1026 aa12.45□□□□□ -0.42
CDK5RAP3-204ENST00000577664 PKD2L1Q9P0L9 805 aa12.45□□□□□ -0.42
CDK5RAP3-204ENST00000577664 STK17AQ9UEE5 414 aa12.45□□□□□ -0.42
CDK5RAP3-204ENST00000577664 PPME1Q9Y570 386 aa12.45□□□□□ -0.42
CDK5RAP3-204ENST00000577664 A0A087X0B3 334 aa12.44□□□□□ -0.42
CDK5RAP3-204ENST00000577664 DDX39AO00148 427 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-204ENST00000577664 HAS3O00219 553 aa12.44□□□□□ -0.42
CDK5RAP3-204ENST00000577664 NOP56O00567 594 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-204ENST00000577664 ZNF862O60290 1169 aa12.44□□□□□ -0.42
CDK5RAP3-204ENST00000577664 ZNF202O95125 648 aa12.44□□□□□ -0.42
CDK5RAP3-204ENST00000577664 MBD3O95983 291 aa12.44□□□□□ -0.42
CDK5RAP3-204ENST00000577664 SLFN14P0C7P3 912 aa12.44□□□□□ -0.42
CDK5RAP3-204ENST00000577664 STAT5BP51692 787 aa12.44□□□□□ -0.42
CDK5RAP3-204ENST00000577664 NFKBIBQ15653 356 aa12.44□□□□□ -0.42
CDK5RAP3-204ENST00000577664 BRDTQ58F21 947 aaPredicted RBP12.44□□□□□ -0.42
CDK5RAP3-204ENST00000577664 FAM160B1Q5W0V3 765 aa12.44□□□□□ -0.42
CDK5RAP3-204ENST00000577664 CNNM4Q6P4Q7 775 aa12.44□□□□□ -0.42
CDK5RAP3-204ENST00000577664 PSRC1Q6PGN9 363 aaPredicted RBP12.44□□□□□ -0.42
CDK5RAP3-204ENST00000577664 CCDC60Q8IWA6 550 aaPredicted RBP12.44□□□□□ -0.42
CDK5RAP3-204ENST00000577664 FAM178BQ8IXR5 827 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms