RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 TECP42680 631 aa15.25■□□□□ 0.03
COPS3-214ENST00000577246 PLCB3Q01970 1234 aa15.25■□□□□ 0.03
COPS3-214ENST00000577246 MTMR3Q13615 1198 aa15.25■□□□□ 0.03
COPS3-214ENST00000577246 TMEM266Q2M3C6 531 aa15.25■□□□□ 0.03
COPS3-214ENST00000577246 TPRNQ4KMQ1 711 aa15.25■□□□□ 0.03
COPS3-214ENST00000577246 FAM160B1Q5W0V3 765 aa15.25■□□□□ 0.03
COPS3-214ENST00000577246 ANKRD54Q6NXT1 300 aa15.25■□□□□ 0.03
COPS3-214ENST00000577246 TRAPPC12Q8WVT3 735 aa15.25■□□□□ 0.03
COPS3-214ENST00000577246 RIPOR3Q96MK2 946 aa15.25■□□□□ 0.03
COPS3-214ENST00000577246 NECTIN4Q96NY8 510 aa15.25■□□□□ 0.03
COPS3-214ENST00000577246 MXRA8Q9BRK3 442 aa15.25■□□□□ 0.03
COPS3-214ENST00000577246 MYL10Q9BUA6 226 aa15.25■□□□□ 0.03
COPS3-214ENST00000577246 ELAC1Q9H777 363 aaKnown RBP15.25■□□□□ 0.03
COPS3-214ENST00000577246 LY9Q9HBG7 655 aa15.25■□□□□ 0.03
COPS3-214ENST00000577246 ERVK-5Q9HDB9 667 aa15.25■□□□□ 0.03
COPS3-214ENST00000577246 FAM86C1Q9NVL1 165 aa15.25■□□□□ 0.03
COPS3-214ENST00000577246 TMEM161AQ9NX61 479 aa15.25■□□□□ 0.03
COPS3-214ENST00000577246 COL1A2P08123 1366 aa15.24■□□□□ 0.03
COPS3-214ENST00000577246 KAT6AQ92794 2004 aa15.24■□□□□ 0.03
COPS3-214ENST00000577246 PROB1E7EW31 1015 aa15.24■□□□□ 0.03
COPS3-214ENST00000577246 HBP1O60381 514 aa15.24■□□□□ 0.03
COPS3-214ENST00000577246 ANTXR2P58335 489 aa15.24■□□□□ 0.03
COPS3-214ENST00000577246 ERVFC1P60507 584 aa15.24■□□□□ 0.03
COPS3-214ENST00000577246 KRT17Q04695 432 aa15.24■□□□□ 0.03
COPS3-214ENST00000577246 UBE2SQ16763 222 aa15.24■□□□□ 0.03
COPS3-214ENST00000577246 PLPP4Q5VZY2 271 aa15.24■□□□□ 0.03
COPS3-214ENST00000577246 CES5AQ6NT32 575 aa15.24■□□□□ 0.03
COPS3-214ENST00000577246 MB21D2Q8IYB1 491 aaPredicted RBP15.24■□□□□ 0.03
COPS3-214ENST00000577246 SRBD1Q8N5C6 995 aaKnown RBP15.24■□□□□ 0.03
COPS3-214ENST00000577246 VN1R2Q8NFZ6 395 aa15.24■□□□□ 0.03
COPS3-214ENST00000577246 MRPS27Q92552 414 aaKnown RBP15.24■□□□□ 0.03
COPS3-214ENST00000577246 CASP10Q92851 521 aa15.24■□□□□ 0.03
COPS3-214ENST00000577246 TCF25Q9BQ70 676 aa15.24■□□□□ 0.03
COPS3-214ENST00000577246 S1PR5Q9H228 398 aa15.24■□□□□ 0.03
COPS3-214ENST00000577246 TYW1Q9NV66 732 aaKnown RBP15.24■□□□□ 0.03
COPS3-214ENST00000577246 TRIOO75962 3097 aa15.23■□□□□ 0.03
COPS3-214ENST00000577246 DOCK5Q9H7D0 1870 aa15.23■□□□□ 0.03
COPS3-214ENST00000577246 C9IYK1 514 aa15.23■□□□□ 0.03
COPS3-214ENST00000577246 BACH1O14867 736 aa15.23■□□□□ 0.03
COPS3-214ENST00000577246 GALR2O43603 387 aaPredicted RBP15.23■□□□□ 0.03
COPS3-214ENST00000577246 PLEKHA8P1O95397 391 aa15.23■□□□□ 0.03
COPS3-214ENST00000577246 FOSP01100 380 aaPredicted RBP15.23■□□□□ 0.03
COPS3-214ENST00000577246 IGHDP01880 384 aa15.23■□□□□ 0.03
COPS3-214ENST00000577246 KLRC1P26715 233 aa15.23■□□□□ 0.03
COPS3-214ENST00000577246 PTH1RQ03431 593 aa15.23■□□□□ 0.03
COPS3-214ENST00000577246 ITIH3Q06033 890 aa15.23■□□□□ 0.03
COPS3-214ENST00000577246 KCNC3Q14003 757 aa15.23■□□□□ 0.03
COPS3-214ENST00000577246 BMS1Q14692 1282 aaKnown RBP15.23■□□□□ 0.03
COPS3-214ENST00000577246 FAM102BQ5T8I3 360 aa15.23■□□□□ 0.03
COPS3-214ENST00000577246 HEATR3Q7Z4Q2 680 aa15.23■□□□□ 0.03
COPS3-214ENST00000577246 ABI1Q8IZP0 508 aa15.23■□□□□ 0.03
COPS3-214ENST00000577246 TMEM87BQ96K49 555 aa15.23■□□□□ 0.03
COPS3-214ENST00000577246 TMEM117Q9H0C3 514 aa15.23■□□□□ 0.03
COPS3-214ENST00000577246 ST3GAL5Q9UNP4 418 aa15.23■□□□□ 0.03
COPS3-214ENST00000577246 SORCS3Q9UPU3 1222 aa15.23■□□□□ 0.03
COPS3-214ENST00000577246 NOC2LQ9Y3T9 749 aaKnown RBP15.23■□□□□ 0.03
COPS3-214ENST00000577246 USP34Q70CQ2 3546 aa15.22■□□□□ 0.03
COPS3-214ENST00000577246 H0Y858 1186 aa15.22■□□□□ 0.03
COPS3-214ENST00000577246 MGEA5O60502 916 aa15.22■□□□□ 0.03
COPS3-214ENST00000577246 ATG7O95352 703 aa15.22■□□□□ 0.03
COPS3-214ENST00000577246 PDE4AP27815 886 aa15.22■□□□□ 0.03
COPS3-214ENST00000577246 MCM5P33992 734 aa15.22■□□□□ 0.03
COPS3-214ENST00000577246 CRYBB1P53674 252 aaPredicted RBP15.22■□□□□ 0.03
COPS3-214ENST00000577246 RBM10P98175 930 aaKnown RBP15.22■□□□□ 0.03
COPS3-214ENST00000577246 CEP55Q53EZ4 464 aa15.22■□□□□ 0.03
COPS3-214ENST00000577246 ZNF484Q5JVG2 852 aa15.22■□□□□ 0.03
COPS3-214ENST00000577246 TTC22Q5TAA0 569 aa15.22■□□□□ 0.03
COPS3-214ENST00000577246 LLGL2Q6P1M3 1020 aa15.22■□□□□ 0.03
COPS3-214ENST00000577246 LRRC43Q8N309 656 aa15.22■□□□□ 0.03
COPS3-214ENST00000577246 KREMEN2Q8NCW0 462 aa15.22■□□□□ 0.03
COPS3-214ENST00000577246 ZNF558Q96NG5 402 aa15.22■□□□□ 0.03
COPS3-214ENST00000577246 TSHZ2Q9NRE2 1034 aa15.22■□□□□ 0.03
COPS3-214ENST00000577246 SLC12A7Q9Y666 1083 aa15.22■□□□□ 0.03
COPS3-214ENST00000577246 KMT2EQ8IZD2 1858 aa15.21■□□□□ 0.03
COPS3-214ENST00000577246 IGKV6D-21A0A0A0MT36 114 aa15.21■□□□□ 0.03
COPS3-214ENST00000577246 PRC1O43663 620 aa15.21■□□□□ 0.03
COPS3-214ENST00000577246 CHMLP26374 656 aa15.21■□□□□ 0.03
COPS3-214ENST00000577246 FAM189BP81408 668 aa15.21■□□□□ 0.03
COPS3-214ENST00000577246 PPP1R18Q6NYC8 613 aa15.21■□□□□ 0.03
COPS3-214ENST00000577246 PDXDC2PQ6P474 469 aa15.21■□□□□ 0.03
COPS3-214ENST00000577246 SYCE2Q6PIF2 218 aa15.21■□□□□ 0.03
COPS3-214ENST00000577246 TMC7Q7Z402 723 aa15.21■□□□□ 0.03
COPS3-214ENST00000577246 KIAA0319LQ8IZA0 1049 aa15.21■□□□□ 0.03
COPS3-214ENST00000577246 ZNF710Q8N1W2 664 aa15.21■□□□□ 0.03
COPS3-214ENST00000577246 GLT8D2Q9H1C3 349 aa15.21■□□□□ 0.03
COPS3-214ENST00000577246 CWH43Q9H720 699 aa15.21■□□□□ 0.03
COPS3-214ENST00000577246 AGO4Q9HCK5 861 aaKnown RBP15.21■□□□□ 0.03
COPS3-214ENST00000577246 TAF6LQ9Y6J9 622 aa15.21■□□□□ 0.03
COPS3-214ENST00000577246 KIAA1671Q9BY89 1806 aa15.21■□□□□ 0.03
COPS3-214ENST00000577246 BAZ2BQ9UIF8 2168 aaKnown RBP15.2■□□□□ 0.02
COPS3-214ENST00000577246 SH2B2O14492 632 aaPredicted RBP15.2■□□□□ 0.02
COPS3-214ENST00000577246 SGSM2O43147 1006 aa15.2■□□□□ 0.02
COPS3-214ENST00000577246 FGFR1P11362 822 aa15.2■□□□□ 0.02
COPS3-214ENST00000577246 GSPT1P15170 499 aaKnown RBP15.2■□□□□ 0.02
COPS3-214ENST00000577246 ZNF76P36508 570 aa15.2■□□□□ 0.02
COPS3-214ENST00000577246 LIFRP42702 1097 aa15.2■□□□□ 0.02
COPS3-214ENST00000577246 MTHFRP42898 656 aa15.2■□□□□ 0.02
COPS3-214ENST00000577246 APOBRQ0VD83 1088 aa15.2■□□□□ 0.02
COPS3-214ENST00000577246 ITGB3BPQ13352 177 aaPredicted RBP15.2■□□□□ 0.02
COPS3-214ENST00000577246 SMC1AQ14683 1233 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms