RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 CNOT10Q9H9A5 744 aaKnown RBP19.31■□□□□ 0.68
ATPAF1-214ENST00000576409 LEMD3Q9Y2U8 911 aa19.31■□□□□ 0.68
ATPAF1-214ENST00000576409 ADAMTS13Q76LX8 1427 aa19.31■□□□□ 0.68
ATPAF1-214ENST00000576409 EXOC1LA0A1B0GW35 172 aa19.31■□□□□ 0.68
ATPAF1-214ENST00000576409 FTLP02792 175 aaPredicted RBP19.31■□□□□ 0.68
ATPAF1-214ENST00000576409 KCNJ1P48048 391 aa19.31■□□□□ 0.68
ATPAF1-214ENST00000576409 TBX2Q13207 712 aaPredicted RBP19.31■□□□□ 0.68
ATPAF1-214ENST00000576409 NLRX1Q86UT6 975 aa19.31■□□□□ 0.68
ATPAF1-214ENST00000576409 DBR1Q9UK59 544 aaKnown RBP19.31■□□□□ 0.68
ATPAF1-214ENST00000576409 ADGRL3Q9HAR2 1447 aa19.31■□□□□ 0.68
ATPAF1-214ENST00000576409 NMT1P30419 496 aaKnown RBP19.31■□□□□ 0.68
ATPAF1-214ENST00000576409 LIG4P49917 911 aa19.31■□□□□ 0.68
ATPAF1-214ENST00000576409 PMS2P54278 862 aa19.31■□□□□ 0.68
ATPAF1-214ENST00000576409 YWHAGP61981 247 aaKnown RBP eCLIP19.31■□□□□ 0.68
ATPAF1-214ENST00000576409 RASIP1Q5U651 963 aa19.31■□□□□ 0.68
ATPAF1-214ENST00000576409 MTA3Q9BTC8 594 aa19.31■□□□□ 0.68
ATPAF1-214ENST00000576409 TEKT3Q9BXF9 490 aa19.31■□□□□ 0.68
ATPAF1-214ENST00000576409 PITPNM3Q9BZ71 974 aa19.31■□□□□ 0.68
ATPAF1-214ENST00000576409 LRRIQ4A6NIV6 560 aa19.3■□□□□ 0.68
ATPAF1-214ENST00000576409 GOLGA8MH3BSY2 632 aa19.3■□□□□ 0.68
ATPAF1-214ENST00000576409 AKR1B1P15121 316 aa19.3■□□□□ 0.68
ATPAF1-214ENST00000576409 PTK2Q05397 1052 aa19.3■□□□□ 0.68
ATPAF1-214ENST00000576409 KNOP1Q1ED39 458 aaKnown RBP19.3■□□□□ 0.68
ATPAF1-214ENST00000576409 ZNF394Q53GI3 561 aa19.3■□□□□ 0.68
ATPAF1-214ENST00000576409 GLG1Q92896 1179 aa19.3■□□□□ 0.68
ATPAF1-214ENST00000576409 PLAGL2Q9UPG8 496 aa19.3■□□□□ 0.68
ATPAF1-214ENST00000576409 FAM205AQ6ZU69 1335 aa19.3■□□□□ 0.68
ATPAF1-214ENST00000576409 I3L4J1 428 aa19.3■□□□□ 0.68
ATPAF1-214ENST00000576409 SMIM24O75264 130 aa19.3■□□□□ 0.68
ATPAF1-214ENST00000576409 CASP7P55210 303 aa19.3■□□□□ 0.68
ATPAF1-214ENST00000576409 CHMP6Q96FZ7 201 aa19.3■□□□□ 0.68
ATPAF1-214ENST00000576409 COMMD10Q9Y6G5 202 aa19.3■□□□□ 0.68
ATPAF1-214ENST00000576409 MAN1A1P33908 653 aa19.3■□□□□ 0.68
ATPAF1-214ENST00000576409 IRX4P78413 519 aa19.3■□□□□ 0.68
ATPAF1-214ENST00000576409 C6orf118Q5T5N4 469 aa19.3■□□□□ 0.68
ATPAF1-214ENST00000576409 PASD1Q8IV76 773 aa19.3■□□□□ 0.68
ATPAF1-214ENST00000576409 ARHGAP20Q9P2F6 1191 aa19.3■□□□□ 0.68
ATPAF1-214ENST00000576409 PDS5AQ29RF7 1337 aaKnown RBP19.3■□□□□ 0.68
ATPAF1-214ENST00000576409 ORC4O43929 436 aa19.29■□□□□ 0.68
ATPAF1-214ENST00000576409 PDHA1P08559 390 aa19.29■□□□□ 0.68
ATPAF1-214ENST00000576409 GALCP54803 685 aa19.29■□□□□ 0.68
ATPAF1-214ENST00000576409 PKN1Q16512 942 aa19.29■□□□□ 0.68
ATPAF1-214ENST00000576409 WDR93Q6P2C0 686 aa19.29■□□□□ 0.68
ATPAF1-214ENST00000576409 CSRNP1Q96S65 589 aa19.29■□□□□ 0.68
ATPAF1-214ENST00000576409 DDX23Q9BUQ8 820 aaKnown RBP19.29■□□□□ 0.68
ATPAF1-214ENST00000576409 KIDINS220Q9ULH0 1771 aa19.29■□□□□ 0.68
ATPAF1-214ENST00000576409 GLI1P08151 1106 aa19.29■□□□□ 0.68
ATPAF1-214ENST00000576409 EIF3BP55884 814 aaKnown RBP19.29■□□□□ 0.68
ATPAF1-214ENST00000576409 ARHGAP4P98171 946 aa19.29■□□□□ 0.68
ATPAF1-214ENST00000576409 ITIH3Q06033 890 aa19.29■□□□□ 0.68
ATPAF1-214ENST00000576409 ZNF354CQ86Y25 554 aa19.29■□□□□ 0.68
ATPAF1-214ENST00000576409 CHURC1Q8WUH1 139 aa19.29■□□□□ 0.68
ATPAF1-214ENST00000576409 FAM118BQ9BPY3 351 aa19.29■□□□□ 0.68
ATPAF1-214ENST00000576409 FERMT1Q9BQL6 677 aa19.29■□□□□ 0.68
ATPAF1-214ENST00000576409 DCTN4Q9UJW0 460 aa19.29■□□□□ 0.68
ATPAF1-214ENST00000576409 ANAPC7Q9UJX3 599 aa19.29■□□□□ 0.68
ATPAF1-214ENST00000576409 MAD1L1Q9Y6D9 718 aa19.29■□□□□ 0.68
ATPAF1-214ENST00000576409 RNF225M0QZC1 329 aaPredicted RBP19.29■□□□□ 0.68
ATPAF1-214ENST00000576409 FOSP01100 380 aaPredicted RBP19.29■□□□□ 0.68
ATPAF1-214ENST00000576409 BRAFP15056 766 aa19.29■□□□□ 0.68
ATPAF1-214ENST00000576409 PACS2Q86VP3 889 aa19.29■□□□□ 0.68
ATPAF1-214ENST00000576409 PARP9Q8IXQ6 854 aa19.29■□□□□ 0.68
ATPAF1-214ENST00000576409 RAB3IPQ96QF0 476 aaPredicted RBP19.29■□□□□ 0.68
ATPAF1-214ENST00000576409 VCXQ9H320 206 aa19.29■□□□□ 0.68
ATPAF1-214ENST00000576409 TTLL3Q9Y4R7 772 aa19.29■□□□□ 0.68
ATPAF1-214ENST00000576409 TTI2Q6NXR4 508 aa19.29■□□□□ 0.68
ATPAF1-214ENST00000576409 ADGRF4Q8IZF3 695 aa19.29■□□□□ 0.68
ATPAF1-214ENST00000576409 PROM2Q8N271 834 aa19.29■□□□□ 0.68
ATPAF1-214ENST00000576409 KIF2BQ8N4N8 673 aa19.29■□□□□ 0.68
ATPAF1-214ENST00000576409 TYW1Q9NV66 732 aaKnown RBP19.29■□□□□ 0.68
ATPAF1-214ENST00000576409 PDE2AO00408 941 aaPredicted RBP19.28■□□□□ 0.68
ATPAF1-214ENST00000576409 UCHL3P15374 230 aa19.28■□□□□ 0.68
ATPAF1-214ENST00000576409 SARSP49591 514 aaKnown RBP19.28■□□□□ 0.68
ATPAF1-214ENST00000576409 PEX3P56589 373 aa19.28■□□□□ 0.68
ATPAF1-214ENST00000576409 MIGA2Q7L4E1 593 aa19.28■□□□□ 0.68
ATPAF1-214ENST00000576409 YIPF3Q9GZM5 350 aa19.28■□□□□ 0.68
ATPAF1-214ENST00000576409 SHPRHQ149N8 1683 aa19.28■□□□□ 0.68
ATPAF1-214ENST00000576409 MFAP3P55082 362 aa19.28■□□□□ 0.68
ATPAF1-214ENST00000576409 QRICH1Q2TAL8 776 aa19.28■□□□□ 0.68
ATPAF1-214ENST00000576409 BBS9Q3SYG4 887 aa19.28■□□□□ 0.68
ATPAF1-214ENST00000576409 RFX8Q6ZV50 586 aa19.28■□□□□ 0.68
ATPAF1-214ENST00000576409 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.28■□□□□ 0.68
ATPAF1-214ENST00000576409 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.28■□□□□ 0.68
ATPAF1-214ENST00000576409 MAIP1Q8WWC4 291 aa19.28■□□□□ 0.68
ATPAF1-214ENST00000576409 CCPG1Q9ULG6 757 aa19.28■□□□□ 0.68
ATPAF1-214ENST00000576409 PCDHB4Q9Y5E5 795 aa19.28■□□□□ 0.68
ATPAF1-214ENST00000576409 CD58P19256 250 aa19.28■□□□□ 0.68
ATPAF1-214ENST00000576409 SEPT2Q15019 361 aa19.28■□□□□ 0.68
ATPAF1-214ENST00000576409 ARHGEF18Q6ZSZ5 1173 aa19.28■□□□□ 0.68
ATPAF1-214ENST00000576409 ANKRD35Q8N283 1001 aa19.28■□□□□ 0.68
ATPAF1-214ENST00000576409 PDCD7Q8N8D1 485 aaKnown RBP19.28■□□□□ 0.68
ATPAF1-214ENST00000576409 GRK7Q8WTQ7 553 aa19.28■□□□□ 0.68
ATPAF1-214ENST00000576409 GBP5Q96PP8 586 aa19.28■□□□□ 0.68
ATPAF1-214ENST00000576409 PLA2G12BQ9BX93 195 aa19.28■□□□□ 0.68
ATPAF1-214ENST00000576409 ETNK1Q9HBU6 452 aa19.28■□□□□ 0.68
ATPAF1-214ENST00000576409 CD209Q9NNX6 404 aa19.28■□□□□ 0.68
ATPAF1-214ENST00000576409 RASA4BC9J798 803 aa19.27■□□□□ 0.68
ATPAF1-214ENST00000576409 ZBTB5O15062 677 aa19.27■□□□□ 0.68
ATPAF1-214ENST00000576409 RASA4O43374 803 aa19.27■□□□□ 0.68
ATPAF1-214ENST00000576409 BMP3P12645 472 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms