RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	PLCB4	Q15147	1175 aa		13.24	□□□□□ -0.29
PRPF8-212	ENST00000575116	FSCN1	Q16658	493 aa	Known RBP	13.24	□□□□□ -0.29
PRPF8-212	ENST00000575116	ARSH	Q5FYA8	562 aa		13.24	□□□□□ -0.29
PRPF8-212	ENST00000575116	XKR9	Q5GH70	373 aa		13.24	□□□□□ -0.29
PRPF8-212	ENST00000575116	DNAJC19	Q96DA6	116 aa		13.24	□□□□□ -0.29
PRPF8-212	ENST00000575116	CEP170P1	Q96L14	293 aa		13.24	□□□□□ -0.29
PRPF8-212	ENST00000575116	CCDC43	Q96MW1	224 aa	Known RBP	13.24	□□□□□ -0.29
PRPF8-212	ENST00000575116	BLZF1	Q9H2G9	400 aa		13.24	□□□□□ -0.29
PRPF8-212	ENST00000575116	CYP26B1	Q9NR63	512 aa		13.24	□□□□□ -0.29
PRPF8-212	ENST00000575116	ODF2L	Q9ULJ1	636 aa		13.24	□□□□□ -0.29
PRPF8-212	ENST00000575116	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.23	□□□□□ -0.29
PRPF8-212	ENST00000575116		H3BRB1	525 aa		13.23	□□□□□ -0.29
PRPF8-212	ENST00000575116	KLRC4	O43908	158 aa		13.23	□□□□□ -0.29
PRPF8-212	ENST00000575116	DGAT1	O75907	488 aa		13.23	□□□□□ -0.29
PRPF8-212	ENST00000575116	RHOBTB3	O94955	611 aa		13.23	□□□□□ -0.29
PRPF8-212	ENST00000575116	KRT18	P05783	430 aa	Known RBP	13.23	□□□□□ -0.29
PRPF8-212	ENST00000575116	CCDC192	P0DO97	292 aa		13.23	□□□□□ -0.29
PRPF8-212	ENST00000575116	PTGS1	P23219	599 aa		13.23	□□□□□ -0.29
PRPF8-212	ENST00000575116	CST5	P28325	142 aa	Predicted RBP	13.23	□□□□□ -0.29
PRPF8-212	ENST00000575116	ASIC1	P78348	528 aa		13.23	□□□□□ -0.29
PRPF8-212	ENST00000575116	PSMD2	Q13200	908 aa		13.23	□□□□□ -0.29
PRPF8-212	ENST00000575116	GIT2	Q14161	759 aa		13.23	□□□□□ -0.29
PRPF8-212	ENST00000575116	TARBP2	Q15633	366 aa	Known RBP	13.23	□□□□□ -0.29
PRPF8-212	ENST00000575116	ZNF484	Q5JVG2	852 aa		13.23	□□□□□ -0.29
PRPF8-212	ENST00000575116	PADI6	Q6TGC4	694 aa		13.23	□□□□□ -0.29
PRPF8-212	ENST00000575116	LRSAM1	Q6UWE0	723 aa		13.23	□□□□□ -0.29
PRPF8-212	ENST00000575116	UNC13D	Q70J99	1090 aa		13.23	□□□□□ -0.29
PRPF8-212	ENST00000575116	CCDC65	Q8IXS2	484 aa		13.23	□□□□□ -0.29
PRPF8-212	ENST00000575116	KATNAL1	Q9BW62	490 aa		13.23	□□□□□ -0.29
PRPF8-212	ENST00000575116	TUT1	Q9H6E5	874 aa	Known RBP	13.23	□□□□□ -0.29
PRPF8-212	ENST00000575116	XPNPEP3	Q9NQH7	507 aa		13.23	□□□□□ -0.29
PRPF8-212	ENST00000575116	PDLIM7	Q9NR12	457 aa		13.23	□□□□□ -0.29
PRPF8-212	ENST00000575116	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.23	□□□□□ -0.29
PRPF8-212	ENST00000575116	COL1A2	P08123	1366 aa		13.22	□□□□□ -0.29
PRPF8-212	ENST00000575116	SYNRG	Q9UMZ2	1314 aa		13.22	□□□□□ -0.29
PRPF8-212	ENST00000575116	FRMD3	A2A2Y4	597 aa		13.22	□□□□□ -0.29
PRPF8-212	ENST00000575116	ADAMTS4	O75173	837 aa		13.22	□□□□□ -0.29
PRPF8-212	ENST00000575116	C6orf222	P0C671	652 aa	Predicted RBP	13.22	□□□□□ -0.29
PRPF8-212	ENST00000575116	CASP1	P29466	404 aa		13.22	□□□□□ -0.29
PRPF8-212	ENST00000575116	RFC5	P40937	340 aa		13.22	□□□□□ -0.29
PRPF8-212	ENST00000575116	LBX1	P52954	281 aa		13.22	□□□□□ -0.29
PRPF8-212	ENST00000575116	NPEPPS	P55786	919 aa		13.22	□□□□□ -0.29
PRPF8-212	ENST00000575116	NLRP12	P59046	1061 aa		13.22	□□□□□ -0.29
PRPF8-212	ENST00000575116	MORC3	Q14149	939 aa		13.22	□□□□□ -0.29
PRPF8-212	ENST00000575116	SLC9C1	Q4G0N8	1177 aa		13.22	□□□□□ -0.29
PRPF8-212	ENST00000575116	GNAS	Q5JWF2	1037 aa		13.22	□□□□□ -0.29
PRPF8-212	ENST00000575116	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.22	□□□□□ -0.29
PRPF8-212	ENST00000575116	DYM	Q7RTS9	669 aa		13.22	□□□□□ -0.29
PRPF8-212	ENST00000575116	TRIM50	Q86XT4	487 aa		13.22	□□□□□ -0.29
PRPF8-212	ENST00000575116	PCSK9	Q8NBP7	692 aa	Known RBP	13.22	□□□□□ -0.29
PRPF8-212	ENST00000575116	KLHDC9	Q8NEP7	349 aa		13.22	□□□□□ -0.29
PRPF8-212	ENST00000575116	ERCC4	Q92889	916 aa	Predicted RBP	13.22	□□□□□ -0.29
PRPF8-212	ENST00000575116	LENG1	Q96BZ8	264 aa	Predicted RBP	13.22	□□□□□ -0.29
PRPF8-212	ENST00000575116	CEP89	Q96ST8	783 aa		13.22	□□□□□ -0.29
PRPF8-212	ENST00000575116	FUCA2	Q9BTY2	467 aa		13.22	□□□□□ -0.29
PRPF8-212	ENST00000575116	RUSC1	Q9BVN2	902 aa		13.22	□□□□□ -0.29
PRPF8-212	ENST00000575116	RNPEP	Q9H4A4	650 aa		13.22	□□□□□ -0.29
PRPF8-212	ENST00000575116	MAN1B1	Q9UKM7	699 aa		13.22	□□□□□ -0.29
PRPF8-212	ENST00000575116	COL4A3BP	Q9Y5P4	624 aa		13.22	□□□□□ -0.29
PRPF8-212	ENST00000575116	RRN3P2	A6NIE6	340 aa		13.21	□□□□□ -0.29
PRPF8-212	ENST00000575116	HAS3	O00219	553 aa		13.21	□□□□□ -0.29
PRPF8-212	ENST00000575116	GAS2	O43903	313 aa	Known RBP	13.21	□□□□□ -0.29
PRPF8-212	ENST00000575116	CAVIN2	O95810	425 aa		13.21	□□□□□ -0.29
PRPF8-212	ENST00000575116	F2	P00734	622 aa		13.21	□□□□□ -0.29
PRPF8-212	ENST00000575116	MYL3	P08590	195 aa		13.21	□□□□□ -0.29
PRPF8-212	ENST00000575116	GAP43	P17677	238 aa		13.21	□□□□□ -0.29
PRPF8-212	ENST00000575116	PURA	Q00577	322 aa	Known RBP	13.21	□□□□□ -0.29
PRPF8-212	ENST00000575116	TYRO3	Q06418	890 aa		13.21	□□□□□ -0.29
PRPF8-212	ENST00000575116	EHHADH	Q08426	723 aa		13.21	□□□□□ -0.29
PRPF8-212	ENST00000575116	STX1A	Q16623	288 aa		13.21	□□□□□ -0.29
PRPF8-212	ENST00000575116	MTERF2	Q49AM1	385 aa		13.21	□□□□□ -0.29
PRPF8-212	ENST00000575116	KMT5B	Q4FZB7	885 aa		13.21	□□□□□ -0.29
PRPF8-212	ENST00000575116	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.21	□□□□□ -0.29
PRPF8-212	ENST00000575116	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.21	□□□□□ -0.29
PRPF8-212	ENST00000575116	PLA2G4F	Q68DD2	849 aa		13.21	□□□□□ -0.29
PRPF8-212	ENST00000575116	LHX8	Q68G74	356 aa		13.21	□□□□□ -0.29
PRPF8-212	ENST00000575116	RNF180	Q86T96	592 aa		13.21	□□□□□ -0.29
PRPF8-212	ENST00000575116	MCPH1	Q8NEM0	835 aa		13.21	□□□□□ -0.29
PRPF8-212	ENST00000575116	KAT2B	Q92831	832 aa		13.21	□□□□□ -0.29
PRPF8-212	ENST00000575116	JPH2	Q9BR39	696 aa	Predicted RBP	13.21	□□□□□ -0.29
PRPF8-212	ENST00000575116	REEP2	Q9BRK0	252 aa		13.21	□□□□□ -0.29
PRPF8-212	ENST00000575116	TSEN34	Q9BSV6	310 aa	Known RBP	13.21	□□□□□ -0.29
PRPF8-212	ENST00000575116	DHX33	Q9H6R0	707 aa	Known RBP	13.21	□□□□□ -0.29
PRPF8-212	ENST00000575116	ATP6V0A4	Q9HBG4	840 aa		13.21	□□□□□ -0.29
PRPF8-212	ENST00000575116	EXOC1	Q9NV70	894 aa		13.21	□□□□□ -0.29
PRPF8-212	ENST00000575116	PANK4	Q9NVE7	773 aa		13.21	□□□□□ -0.29
PRPF8-212	ENST00000575116	ANO10	Q9NW15	660 aa		13.21	□□□□□ -0.29
PRPF8-212	ENST00000575116	SEL1L	Q9UBV2	794 aa		13.21	□□□□□ -0.29
PRPF8-212	ENST00000575116	KCNG1	Q9UIX4	513 aa		13.21	□□□□□ -0.29
PRPF8-212	ENST00000575116	TRPC6	Q9Y210	931 aa		13.21	□□□□□ -0.29
PRPF8-212	ENST00000575116	TMEM150B	A6NC51	233 aa		13.2	□□□□□ -0.3
PRPF8-212	ENST00000575116	MAGEB2	O15479	319 aa		13.2	□□□□□ -0.3
PRPF8-212	ENST00000575116	USO1	O60763	962 aa	Known RBP	13.2	□□□□□ -0.3
PRPF8-212	ENST00000575116	TBCA	O75347	108 aa	Known RBP	13.2	□□□□□ -0.3
PRPF8-212	ENST00000575116	MAF	O75444	373 aa	Predicted RBP	13.2	□□□□□ -0.3
PRPF8-212	ENST00000575116	CABYR	O75952	493 aa		13.2	□□□□□ -0.3
PRPF8-212	ENST00000575116	PGK1	P00558	417 aa		13.2	□□□□□ -0.3
PRPF8-212	ENST00000575116	ZNF286B	P0CG31	522 aa		13.2	□□□□□ -0.3
PRPF8-212	ENST00000575116	IDE	P14735	1019 aa		13.2	□□□□□ -0.3
PRPF8-212	ENST00000575116	MARK3	P27448	753 aa		13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms