RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 CHMP4BP1P59074 171 aa15.43■□□□□ 0.06
VPS33B-208ENST00000574755 APBA1Q02410 837 aa15.43■□□□□ 0.06
VPS33B-208ENST00000574755 SFMBT2Q5VUG0 894 aa15.43■□□□□ 0.06
VPS33B-208ENST00000574755 RSRC2Q7L4I2 434 aaKnown RBP15.43■□□□□ 0.06
VPS33B-208ENST00000574755 ZNF720Q7Z2F6 126 aa15.43■□□□□ 0.06
VPS33B-208ENST00000574755 PURBQ96QR8 312 aaKnown RBP15.43■□□□□ 0.06
VPS33B-208ENST00000574755 TSGA10Q9BZW7 698 aa15.43■□□□□ 0.06
VPS33B-208ENST00000574755 PCDHB13Q9Y5F0 798 aa15.43■□□□□ 0.06
VPS33B-208ENST00000574755 DUSP10Q9Y6W6 482 aa15.43■□□□□ 0.06
VPS33B-208ENST00000574755 MACROD2A1Z1Q3 448 aa15.43■□□□□ 0.06
VPS33B-208ENST00000574755 TESPA1A2RU30 521 aaPredicted RBP15.43■□□□□ 0.06
VPS33B-208ENST00000574755 ENC1O14682 589 aa15.43■□□□□ 0.06
VPS33B-208ENST00000574755 USO1O60763 962 aaKnown RBP15.43■□□□□ 0.06
VPS33B-208ENST00000574755 HIP1RO75146 1068 aa15.43■□□□□ 0.06
VPS33B-208ENST00000574755 SLC9C1Q4G0N8 1177 aa15.43■□□□□ 0.06
VPS33B-208ENST00000574755 SNRNP48Q6IEG0 339 aaKnown RBP15.43■□□□□ 0.06
VPS33B-208ENST00000574755 PADI6Q6TGC4 694 aa15.43■□□□□ 0.06
VPS33B-208ENST00000574755 KSR1Q8IVT5 923 aa15.43■□□□□ 0.06
VPS33B-208ENST00000574755 FIZ1Q96SL8 496 aa15.43■□□□□ 0.06
VPS33B-208ENST00000574755 IKZF4Q9H2S9 585 aa15.43■□□□□ 0.06
VPS33B-208ENST00000574755 ARGLU1Q9NWB6 273 aaPredicted RBP15.43■□□□□ 0.06
VPS33B-208ENST00000574755 MYO6Q9UM54 1294 aa15.43■□□□□ 0.06
VPS33B-208ENST00000574755 PCDHA13Q9Y5I0 950 aa15.43■□□□□ 0.06
VPS33B-208ENST00000574755 RLFQ13129 1914 aa15.43■□□□□ 0.06
VPS33B-208ENST00000574755 LCA5LO95447 670 aa15.42■□□□□ 0.06
VPS33B-208ENST00000574755 QARSP47897 775 aaKnown RBP15.42■□□□□ 0.06
VPS33B-208ENST00000574755 BAATQ14032 418 aaPredicted RBP15.42■□□□□ 0.06
VPS33B-208ENST00000574755 MAEAQ7L5Y9 396 aa15.42■□□□□ 0.06
VPS33B-208ENST00000574755 GPR161Q8N6U8 529 aaKnown RBP15.42■□□□□ 0.06
VPS33B-208ENST00000574755 SYN2Q92777 582 aaPredicted RBP15.42■□□□□ 0.06
VPS33B-208ENST00000574755 KLRG1Q96E93 195 aa15.42■□□□□ 0.06
VPS33B-208ENST00000574755 EPC1Q9H2F5 836 aa15.42■□□□□ 0.06
VPS33B-208ENST00000574755 TCEAL9Q9UHQ7 104 aa15.42■□□□□ 0.06
VPS33B-208ENST00000574755 UBE4BO95155 1302 aa15.42■□□□□ 0.06
VPS33B-208ENST00000574755 SSU72P8A0A1W2PR75 194 aa15.42■□□□□ 0.06
VPS33B-208ENST00000574755 SPDYE4A6NLX3 237 aa15.42■□□□□ 0.06
VPS33B-208ENST00000574755 C19orf81C9J6K1 198 aa15.42■□□□□ 0.06
VPS33B-208ENST00000574755 HGSNATQ68CP4 663 aa15.42■□□□□ 0.06
VPS33B-208ENST00000574755 HS2ST1Q7LGA3 356 aa15.42■□□□□ 0.06
VPS33B-208ENST00000574755 GPC2Q8N158 579 aa15.42■□□□□ 0.06
VPS33B-208ENST00000574755 RABGGTAQ92696 567 aa15.42■□□□□ 0.06
VPS33B-208ENST00000574755 SECISBP2LQ93073 1101 aaKnown RBP15.42■□□□□ 0.06
VPS33B-208ENST00000574755 C12orf42Q96LP6 360 aa15.42■□□□□ 0.06
VPS33B-208ENST00000574755 PPP1R12BO60237 982 aaPredicted RBP15.41■□□□□ 0.06
VPS33B-208ENST00000574755 TFRCP02786 760 aaKnown RBP15.41■□□□□ 0.06
VPS33B-208ENST00000574755 SERPING1P05155 500 aa15.41■□□□□ 0.06
VPS33B-208ENST00000574755 CLCN6P51797 869 aa15.41■□□□□ 0.06
VPS33B-208ENST00000574755 AMPD2Q01433 879 aa15.41■□□□□ 0.06
VPS33B-208ENST00000574755 GFPT1Q06210 699 aaPredicted RBP15.41■□□□□ 0.06
VPS33B-208ENST00000574755 MAPK8IP2Q13387 824 aaPredicted RBP15.41■□□□□ 0.06
VPS33B-208ENST00000574755 RAPGEF1Q13905 1077 aa15.41■□□□□ 0.06
VPS33B-208ENST00000574755 EXOC3L4Q17RC7 722 aa15.41■□□□□ 0.06
VPS33B-208ENST00000574755 WHAMMP3Q1A5X7 153 aa15.41■□□□□ 0.06
VPS33B-208ENST00000574755 CCDC43Q96MW1 224 aaKnown RBP15.41■□□□□ 0.06
VPS33B-208ENST00000574755 TLR2O60603 784 aa15.41■□□□□ 0.06
VPS33B-208ENST00000574755 ATP9AO75110 1047 aa15.41■□□□□ 0.06
VPS33B-208ENST00000574755 ATP1A1P05023 1023 aaKnown RBP15.41■□□□□ 0.06
VPS33B-208ENST00000574755 SLC9A1P19634 815 aa15.41■□□□□ 0.06
VPS33B-208ENST00000574755 DSG3P32926 999 aa15.41■□□□□ 0.06
VPS33B-208ENST00000574755 PSMC2P35998 433 aaKnown RBP15.41■□□□□ 0.06
VPS33B-208ENST00000574755 RARRES1P49788 294 aa15.41■□□□□ 0.06
VPS33B-208ENST00000574755 MAPK7Q13164 816 aa15.41■□□□□ 0.06
VPS33B-208ENST00000574755 PRKG1Q13976 671 aa15.41■□□□□ 0.06
VPS33B-208ENST00000574755 COG2Q14746 738 aa15.41■□□□□ 0.06
VPS33B-208ENST00000574755 DAW1Q8N136 415 aa15.41■□□□□ 0.06
VPS33B-208ENST00000574755 SLC35C1Q96A29 364 aa15.41■□□□□ 0.06
VPS33B-208ENST00000574755 GBP3Q9H0R5 595 aa15.41■□□□□ 0.06
VPS33B-208ENST00000574755 GANQ9H2C0 597 aa15.41■□□□□ 0.06
VPS33B-208ENST00000574755 TMOD4Q9NZQ9 345 aa15.41■□□□□ 0.06
VPS33B-208ENST00000574755 DBR1Q9UK59 544 aaKnown RBP15.41■□□□□ 0.06
VPS33B-208ENST00000574755 PPP2R3BQ9Y5P8 575 aa15.41■□□□□ 0.06
VPS33B-208ENST00000574755 POLR2AP24928 1970 aaKnown RBP15.41■□□□□ 0.06
VPS33B-208ENST00000574755 DICER1Q9UPY3 1922 aaKnown RBP15.4■□□□□ 0.06
VPS33B-208ENST00000574755 ACTN1P12814 892 aa15.4■□□□□ 0.06
VPS33B-208ENST00000574755 YWHABP31946 246 aaKnown RBP15.4■□□□□ 0.06
VPS33B-208ENST00000574755 HIRAP54198 1017 aaPredicted RBP15.4■□□□□ 0.06
VPS33B-208ENST00000574755 OAZ1P54368 228 aa15.4■□□□□ 0.06
VPS33B-208ENST00000574755 ARID5AQ03989 594 aa15.4■□□□□ 0.06
VPS33B-208ENST00000574755 NFIL3Q16649 462 aa15.4■□□□□ 0.06
VPS33B-208ENST00000574755 ASTE1Q2TB18 679 aaPredicted RBP15.4■□□□□ 0.06
VPS33B-208ENST00000574755 TRMT1LQ7Z2T5 733 aaKnown RBP15.4■□□□□ 0.06
VPS33B-208ENST00000574755 FAM186BQ8IYM0 893 aa15.4■□□□□ 0.06
VPS33B-208ENST00000574755 REPS2Q8NFH8 660 aa15.4■□□□□ 0.06
VPS33B-208ENST00000574755 LARSQ9P2J5 1176 aaKnown RBP15.4■□□□□ 0.06
VPS33B-208ENST00000574755 HDAC6Q9UBN7 1215 aa15.4■□□□□ 0.06
VPS33B-208ENST00000574755 ZNF214Q9UL59 606 aaPredicted RBP15.4■□□□□ 0.06
VPS33B-208ENST00000574755 SSC5DA1L4H1 1573 aa15.4■□□□□ 0.06
VPS33B-208ENST00000574755 K7ENM7 598 aa15.4■□□□□ 0.06
VPS33B-208ENST00000574755 CCND2P30279 289 aa15.4■□□□□ 0.06
VPS33B-208ENST00000574755 MAGEA1P43355 309 aa15.4■□□□□ 0.06
VPS33B-208ENST00000574755 PLS1Q14651 629 aa15.4■□□□□ 0.06
VPS33B-208ENST00000574755 SUPT20HL1Q3ZLR7 823 aa15.4■□□□□ 0.06
VPS33B-208ENST00000574755 TRAPPC11Q7Z392 1133 aa15.4■□□□□ 0.06
VPS33B-208ENST00000574755 SYCP3Q8IZU3 236 aa15.4■□□□□ 0.06
VPS33B-208ENST00000574755 FAM133AQ8N9E0 248 aa15.4■□□□□ 0.06
VPS33B-208ENST00000574755 SH2D3AQ9BRG2 576 aa15.4■□□□□ 0.06
VPS33B-208ENST00000574755 PLCB1Q9NQ66 1216 aa15.4■□□□□ 0.06
VPS33B-208ENST00000574755 DDX41Q9UJV9 622 aaKnown RBP15.4■□□□□ 0.06
VPS33B-208ENST00000574755 SAR1BQ9Y6B6 198 aa15.4■□□□□ 0.06
VPS33B-208ENST00000574755 CTAGE15A4D2H0 777 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms