RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 PCP11498 1178 aaKnown RBP15.64■□□□□ 0.09
SMG6-215ENST00000574501 PECAM1P16284 738 aaPredicted RBP15.64■□□□□ 0.09
SMG6-215ENST00000574501 SLC9A1P19634 815 aa15.64■□□□□ 0.09
SMG6-215ENST00000574501 ATP4AP20648 1035 aa15.64■□□□□ 0.09
SMG6-215ENST00000574501 NAPAP54920 295 aa15.64■□□□□ 0.09
SMG6-215ENST00000574501 TFAP4Q01664 338 aa15.64■□□□□ 0.09
SMG6-215ENST00000574501 BNIP1Q12981 228 aa15.64■□□□□ 0.09
SMG6-215ENST00000574501 NONOQ15233 471 aaKnown RBP eCLIP15.64■□□□□ 0.09
SMG6-215ENST00000574501 CNGA2Q16280 664 aa15.64■□□□□ 0.09
SMG6-215ENST00000574501 GNPTABQ3T906 1256 aa15.64■□□□□ 0.09
SMG6-215ENST00000574501 ZCWPW2Q504Y3 356 aa15.64■□□□□ 0.09
SMG6-215ENST00000574501 NT5DC3Q86UY8 548 aa15.64■□□□□ 0.09
SMG6-215ENST00000574501 DAGLBQ8NCG7 672 aa15.64■□□□□ 0.09
SMG6-215ENST00000574501 SLC17A8Q8NDX2 589 aa15.64■□□□□ 0.09
SMG6-215ENST00000574501 RAB17Q9H0T7 212 aa15.64■□□□□ 0.09
SMG6-215ENST00000574501 ERVK-5Q9HDB9 667 aa15.64■□□□□ 0.09
SMG6-215ENST00000574501 IL17RBQ9NRM6 502 aa15.64■□□□□ 0.09
SMG6-215ENST00000574501 ZFATQ9P243 1243 aa15.64■□□□□ 0.09
SMG6-215ENST00000574501 STXBP5LQ9Y2K9 1186 aa15.64■□□□□ 0.09
SMG6-215ENST00000574501 DAAM1Q9Y4D1 1078 aa15.64■□□□□ 0.09
SMG6-215ENST00000574501 CICQ96RK0 1608 aaPredicted RBP15.64■□□□□ 0.09
SMG6-215ENST00000574501 ARAP2Q8WZ64 1704 aa15.64■□□□□ 0.09
SMG6-215ENST00000574501 FGFR4P22455 802 aa15.64■□□□□ 0.09
SMG6-215ENST00000574501 PDE6CP51160 858 aa15.64■□□□□ 0.09
SMG6-215ENST00000574501 ATP11AP98196 1134 aa15.64■□□□□ 0.09
SMG6-215ENST00000574501 CHRNDQ07001 517 aa15.64■□□□□ 0.09
SMG6-215ENST00000574501 KLRC3Q07444 240 aa15.64■□□□□ 0.09
SMG6-215ENST00000574501 DUPD1Q68J44 220 aa15.64■□□□□ 0.09
SMG6-215ENST00000574501 FAM43BQ6ZT52 329 aaPredicted RBP15.64■□□□□ 0.09
SMG6-215ENST00000574501 OTUD6AQ7L8S5 288 aa15.64■□□□□ 0.09
SMG6-215ENST00000574501 NEK8Q86SG6 692 aa15.64■□□□□ 0.09
SMG6-215ENST00000574501 TRIM59Q8IWR1 403 aa15.64■□□□□ 0.09
SMG6-215ENST00000574501 PROM2Q8N271 834 aa15.64■□□□□ 0.09
SMG6-215ENST00000574501 TBCKQ8TEA7 893 aa15.64■□□□□ 0.09
SMG6-215ENST00000574501 ERP44Q9BS26 406 aa15.64■□□□□ 0.09
SMG6-215ENST00000574501 DCP1AQ9NPI6 582 aaPredicted RBP15.64■□□□□ 0.09
SMG6-215ENST00000574501 ARHGEF3Q9NR81 526 aa15.64■□□□□ 0.09
SMG6-215ENST00000574501 CCDC88AQ3V6T2 1871 aa15.63■□□□□ 0.09
SMG6-215ENST00000574501 DPPA5A6NC42 116 aa15.63■□□□□ 0.09
SMG6-215ENST00000574501 MPHOSPH10O00566 681 aaKnown RBP15.63■□□□□ 0.09
SMG6-215ENST00000574501 CTCFP49711 727 aaPredicted RBP15.63■□□□□ 0.09
SMG6-215ENST00000574501 RWDD2BP57060 319 aa15.63■□□□□ 0.09
SMG6-215ENST00000574501 KCNH2Q12809 1159 aa15.63■□□□□ 0.09
SMG6-215ENST00000574501 FITM2Q8N6M3 262 aa15.63■□□□□ 0.09
SMG6-215ENST00000574501 RAD54LQ92698 747 aa15.63■□□□□ 0.09
SMG6-215ENST00000574501 NAF1Q96HR8 494 aaKnown RBP15.63■□□□□ 0.09
SMG6-215ENST00000574501 CCDC134Q9H6E4 229 aa15.63■□□□□ 0.09
SMG6-215ENST00000574501 OSGEPQ9NPF4 335 aa15.63■□□□□ 0.09
SMG6-215ENST00000574501 TMOD3Q9NYL9 352 aa15.63■□□□□ 0.09
SMG6-215ENST00000574501 CPSF2Q9P2I0 782 aaKnown RBP15.63■□□□□ 0.09
SMG6-215ENST00000574501 SUCLA2Q9P2R7 463 aaPredicted RBP15.63■□□□□ 0.09
SMG6-215ENST00000574501 BIN2Q9UBW5 565 aaPredicted RBP15.63■□□□□ 0.09
SMG6-215ENST00000574501 RTCBQ9Y3I0 505 aaKnown RBP15.63■□□□□ 0.09
SMG6-215ENST00000574501 RPTORQ8N122 1335 aa15.63■□□□□ 0.09
SMG6-215ENST00000574501 CASZ1Q86V15 1759 aa15.63■□□□□ 0.09
SMG6-215ENST00000574501 LTBP4Q8N2S1 1624 aa15.63■□□□□ 0.09
SMG6-215ENST00000574501 SMCO2A6NFE2 343 aa15.63■□□□□ 0.09
SMG6-215ENST00000574501 OAS1P00973 400 aaKnown RBP15.63■□□□□ 0.09
SMG6-215ENST00000574501 ZNF131P52739 623 aa15.63■□□□□ 0.09
SMG6-215ENST00000574501 LACTBP83111 547 aaPredicted RBP15.63■□□□□ 0.09
SMG6-215ENST00000574501 CACNB1Q02641 598 aaPredicted RBP15.63■□□□□ 0.09
SMG6-215ENST00000574501 COASYQ13057 564 aa15.63■□□□□ 0.09
SMG6-215ENST00000574501 ZNF211Q13398 564 aaPredicted RBP15.63■□□□□ 0.09
SMG6-215ENST00000574501 NBPF20Q3BBV1 942 aa15.63■□□□□ 0.09
SMG6-215ENST00000574501 C10orf76Q5T2E6 689 aa15.63■□□□□ 0.09
SMG6-215ENST00000574501 NUGGCQ68CJ6 796 aa15.63■□□□□ 0.09
SMG6-215ENST00000574501 SLAIN2Q9P270 581 aa15.63■□□□□ 0.09
SMG6-215ENST00000574501 NKX1-2Q9UD57 310 aaPredicted RBP15.63■□□□□ 0.09
SMG6-215ENST00000574501 DCCP43146 1447 aa15.62■□□□□ 0.09
SMG6-215ENST00000574501 GOLGA6L10A0A0M3HER8 536 aa15.62■□□□□ 0.09
SMG6-215ENST00000574501 USP17L3A6NCW0 530 aa15.62■□□□□ 0.09
SMG6-215ENST00000574501 USP17L4A6NCW7 530 aa15.62■□□□□ 0.09
SMG6-215ENST00000574501 LIN7AO14910 233 aaPredicted RBP15.62■□□□□ 0.09
SMG6-215ENST00000574501 AGTP01019 485 aa15.62■□□□□ 0.09
SMG6-215ENST00000574501 C6orf118Q5T5N4 469 aa15.62■□□□□ 0.09
SMG6-215ENST00000574501 SOGA3Q5TF21 947 aa15.62■□□□□ 0.09
SMG6-215ENST00000574501 DCAF12L1Q5VU92 463 aa15.62■□□□□ 0.09
SMG6-215ENST00000574501 ZDHHC24Q6UX98 284 aa15.62■□□□□ 0.09
SMG6-215ENST00000574501 USP17L1Q7RTZ2 530 aa15.62■□□□□ 0.09
SMG6-215ENST00000574501 SLFN11Q7Z7L1 901 aa15.62■□□□□ 0.09
SMG6-215ENST00000574501 RBM46Q8TBY0 533 aaKnown RBP15.62■□□□□ 0.09
SMG6-215ENST00000574501 HES6Q96HZ4 224 aa15.62■□□□□ 0.09
SMG6-215ENST00000574501 TMEM260Q9NX78 707 aa15.62■□□□□ 0.09
SMG6-215ENST00000574501 STK17AQ9UEE5 414 aa15.62■□□□□ 0.09
SMG6-215ENST00000574501 ZMYND8Q9ULU4 1186 aaPredicted RBP15.62■□□□□ 0.09
SMG6-215ENST00000574501 TNS2Q63HR2 1409 aa15.62■□□□□ 0.09
SMG6-215ENST00000574501 COL18A1P39060 1754 aa15.62■□□□□ 0.09
SMG6-215ENST00000574501 C1orf167Q5SNV9 1468 aa15.62■□□□□ 0.09
SMG6-215ENST00000574501 FOXO6A8MYZ6 492 aa15.62■□□□□ 0.09
SMG6-215ENST00000574501 SUN1O94901 812 aa15.62■□□□□ 0.09
SMG6-215ENST00000574501 CREB1P16220 341 aa15.62■□□□□ 0.09
SMG6-215ENST00000574501 RAB27AP51159 221 aa15.62■□□□□ 0.09
SMG6-215ENST00000574501 PTENP60484 403 aa15.62■□□□□ 0.09
SMG6-215ENST00000574501 ECM1Q16610 540 aa15.62■□□□□ 0.09
SMG6-215ENST00000574501 GALNT17Q6IS24 598 aa15.62■□□□□ 0.09
SMG6-215ENST00000574501 KRT25Q7Z3Z0 450 aa15.62■□□□□ 0.09
SMG6-215ENST00000574501 SNX29Q8TEQ0 813 aa15.62■□□□□ 0.09
SMG6-215ENST00000574501 AMFRQ9UKV5 643 aa15.62■□□□□ 0.09
SMG6-215ENST00000574501 PPP1R9AQ9ULJ8 1098 aa15.62■□□□□ 0.09
SMG6-215ENST00000574501 MAP3K13O43283 966 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms