RNA–Protein interactions for RNA: ENST00000574437.5

ABR-228, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 5 BASIC

Gene ABR, Length 3,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-228ENST00000574437 SMIM23A6NLE4 172 aa16.2■□□□□ 0.18
ABR-228ENST00000574437 DCDC2CA8MYV0 355 aa16.2■□□□□ 0.18
ABR-228ENST00000574437 MYBP10242 640 aa16.2■□□□□ 0.18
ABR-228ENST00000574437 COPB2P35606 906 aa16.2■□□□□ 0.18
ABR-228ENST00000574437 CASP4P49662 377 aa16.2■□□□□ 0.18
ABR-228ENST00000574437 CDR1P51861 262 aa16.2■□□□□ 0.18
ABR-228ENST00000574437 PWP2Q15269 919 aaKnown RBP16.2■□□□□ 0.18
ABR-228ENST00000574437 ARSHQ5FYA8 562 aa16.2■□□□□ 0.18
ABR-228ENST00000574437 TRIM51Q9BSJ1 452 aa16.2■□□□□ 0.18
ABR-228ENST00000574437 DHX36Q9H2U1 1008 aaKnown RBP16.2■□□□□ 0.18
ABR-228ENST00000574437 BCAS3Q9H6U6 928 aa16.2■□□□□ 0.18
ABR-228ENST00000574437 GCNT4Q9P109 453 aa16.2■□□□□ 0.18
ABR-228ENST00000574437 SFI1A8K8P3 1242 aa16.2■□□□□ 0.18
ABR-228ENST00000574437 PLSCR1O15162 318 aa16.2■□□□□ 0.18
ABR-228ENST00000574437 TTLL1O95922 423 aa16.2■□□□□ 0.18
ABR-228ENST00000574437 CCDC13Q8IYE1 715 aa16.2■□□□□ 0.18
ABR-228ENST00000574437 CCDC26Q8TAB7 109 aa16.2■□□□□ 0.18
ABR-228ENST00000574437 TLDC2A0PJX2 215 aa16.2■□□□□ 0.18
ABR-228ENST00000574437 AKAP3O75969 853 aa16.2■□□□□ 0.18
ABR-228ENST00000574437 GCNT3O95395 438 aa16.2■□□□□ 0.18
ABR-228ENST00000574437 FGGP02679 453 aa16.2■□□□□ 0.18
ABR-228ENST00000574437 RDXP35241 583 aaKnown RBP16.2■□□□□ 0.18
ABR-228ENST00000574437 QPCTQ16769 361 aa16.2■□□□□ 0.18
ABR-228ENST00000574437 CPLX4Q7Z7G2 160 aa16.2■□□□□ 0.18
ABR-228ENST00000574437 ACTRT1Q8TDG2 376 aa16.2■□□□□ 0.18
ABR-228ENST00000574437 AKT1S1Q96B36 256 aa16.2■□□□□ 0.18
ABR-228ENST00000574437 NCAPGQ9BPX3 1015 aa16.2■□□□□ 0.18
ABR-228ENST00000574437 AJAP1Q9UKB5 411 aaPredicted RBP16.2■□□□□ 0.18
ABR-228ENST00000574437 UTP11Q9Y3A2 253 aaKnown RBP16.2■□□□□ 0.18
ABR-228ENST00000574437 BZW2Q9Y6E2 419 aaKnown RBP16.2■□□□□ 0.18
ABR-228ENST00000574437 RSPH10B2B2RC85 870 aa16.19■□□□□ 0.18
ABR-228ENST00000574437 RSPH10BP0C881 870 aa16.19■□□□□ 0.18
ABR-228ENST00000574437 GCFC2P16383 781 aaKnown RBP16.19■□□□□ 0.18
ABR-228ENST00000574437 MARSP56192 900 aaKnown RBP16.19■□□□□ 0.18
ABR-228ENST00000574437 SNAP25P60880 206 aa16.19■□□□□ 0.18
ABR-228ENST00000574437 GTF2IP78347 998 aa16.19■□□□□ 0.18
ABR-228ENST00000574437 KNOP1Q1ED39 458 aaKnown RBP16.19■□□□□ 0.18
ABR-228ENST00000574437 EDRF1Q3B7T1 1238 aa16.19■□□□□ 0.18
ABR-228ENST00000574437 C10orf76Q5T2E6 689 aa16.19■□□□□ 0.18
ABR-228ENST00000574437 LRIG3Q6UXM1 1119 aa16.19■□□□□ 0.18
ABR-228ENST00000574437 LRRC57Q8N9N7 239 aa16.19■□□□□ 0.18
ABR-228ENST00000574437 LMBR1Q8WVP7 490 aa16.19■□□□□ 0.18
ABR-228ENST00000574437 CNOT8Q9UFF9 292 aaKnown RBP16.19■□□□□ 0.18
ABR-228ENST00000574437 POLLQ9UGP5 575 aa16.19■□□□□ 0.18
ABR-228ENST00000574437 PCDHA1Q9Y5I3 950 aa16.19■□□□□ 0.18
ABR-228ENST00000574437 ZBTB5O15062 677 aa16.19■□□□□ 0.18
ABR-228ENST00000574437 PPP2R2AP63151 447 aa16.19■□□□□ 0.18
ABR-228ENST00000574437 CRY2Q49AN0 593 aa16.19■□□□□ 0.18
ABR-228ENST00000574437 MYCBPQ99417 103 aaPredicted RBP16.19■□□□□ 0.18
ABR-228ENST00000574437 REEP2Q9BRK0 252 aa16.19■□□□□ 0.18
ABR-228ENST00000574437 IKZF4Q9H2S9 585 aa16.19■□□□□ 0.18
ABR-228ENST00000574437 OSGEPQ9NPF4 335 aa16.19■□□□□ 0.18
ABR-228ENST00000574437 DDX20Q9UHI6 824 aaKnown RBP16.19■□□□□ 0.18
ABR-228ENST00000574437 GGA1Q9UJY5 639 aa16.19■□□□□ 0.18
ABR-228ENST00000574437 DNM3Q9UQ16 869 aa16.19■□□□□ 0.18
ABR-228ENST00000574437 PHF20L1A8MW92 1017 aa16.18■□□□□ 0.18
ABR-228ENST00000574437 KCNA1Q09470 495 aa16.18■□□□□ 0.18
ABR-228ENST00000574437 CATSPER3Q86XQ3 398 aa16.18■□□□□ 0.18
ABR-228ENST00000574437 SLF2Q8IX21 1173 aa16.18■□□□□ 0.18
ABR-228ENST00000574437 MDM1Q8TC05 714 aa16.18■□□□□ 0.18
ABR-228ENST00000574437 H0YGN5 161 aa16.18■□□□□ 0.18
ABR-228ENST00000574437 ACTN3Q08043 901 aaPredicted RBP16.18■□□□□ 0.18
ABR-228ENST00000574437 SWT1Q5T5J6 900 aaKnown RBP16.18■□□□□ 0.18
ABR-228ENST00000574437 FOXR2Q6PJQ5 311 aa16.18■□□□□ 0.18
ABR-228ENST00000574437 PPP4R3CPQ6ZMV5 832 aa16.18■□□□□ 0.18
ABR-228ENST00000574437 UBR3Q6ZT12 1888 aa16.18■□□□□ 0.18
ABR-228ENST00000574437 GLYCTKQ8IVS8 523 aa16.18■□□□□ 0.18
ABR-228ENST00000574437 ANO3Q9BYT9 981 aa16.18■□□□□ 0.18
ABR-228ENST00000574437 YY1AP1Q9H869 796 aa16.18■□□□□ 0.18
ABR-228ENST00000574437 AMFRQ9UKV5 643 aa16.18■□□□□ 0.18
ABR-228ENST00000574437 NFS1Q9Y697 457 aa16.18■□□□□ 0.18
ABR-228ENST00000574437 HOXA7P31268 230 aaPredicted RBP16.18■□□□□ 0.18
ABR-228ENST00000574437 MAP2K2P36507 400 aa16.18■□□□□ 0.18
ABR-228ENST00000574437 GALCP54803 685 aa16.18■□□□□ 0.18
ABR-228ENST00000574437 ZNF211Q13398 564 aaPredicted RBP16.18■□□□□ 0.18
ABR-228ENST00000574437 MTMR3Q13615 1198 aa16.18■□□□□ 0.18
ABR-228ENST00000574437 FRMD5Q7Z6J6 570 aa16.18■□□□□ 0.18
ABR-228ENST00000574437 VCPKMTQ9H867 229 aa16.18■□□□□ 0.18
ABR-228ENST00000574437 LRRC4CQ9HCJ2 640 aa16.18■□□□□ 0.18
ABR-228ENST00000574437 KLC4Q9NSK0 619 aa16.18■□□□□ 0.18
ABR-228ENST00000574437 DAGLAQ9Y4D2 1042 aa16.18■□□□□ 0.18
ABR-228ENST00000574437 CCDC188H7C350 402 aa16.17■□□□□ 0.18
ABR-228ENST00000574437 DDX3XO00571 662 aaKnown RBP eCLIP16.17■□□□□ 0.18
ABR-228ENST00000574437 CALUO43852 315 aaPredicted RBP16.17■□□□□ 0.18
ABR-228ENST00000574437 NR3C1P04150 777 aa16.17■□□□□ 0.18
ABR-228ENST00000574437 CLK2P49760 499 aaKnown RBP16.17■□□□□ 0.18
ABR-228ENST00000574437 SLC12A3P55017 1021 aa16.17■□□□□ 0.18
ABR-228ENST00000574437 IKQ13123 557 aaPredicted RBP16.17■□□□□ 0.18
ABR-228ENST00000574437 BIRC3Q13489 604 aa16.17■□□□□ 0.18
ABR-228ENST00000574437 GIT2Q14161 759 aa16.17■□□□□ 0.18
ABR-228ENST00000574437 DEFB132Q7Z7B7 95 aa16.17■□□□□ 0.18
ABR-228ENST00000574437 UHMK1Q8TAS1 419 aaKnown RBP16.17■□□□□ 0.18
ABR-228ENST00000574437 RAPGEF5Q92565 580 aa16.17■□□□□ 0.18
ABR-228ENST00000574437 CALR3Q96L12 384 aaKnown RBP16.17■□□□□ 0.18
ABR-228ENST00000574437 NR2E1Q9Y466 385 aa16.17■□□□□ 0.18
ABR-228ENST00000574437 NAV1Q8NEY1 1877 aa16.17■□□□□ 0.18
ABR-228ENST00000574437 CACNA2D3Q8IZS8 1091 aa16.17■□□□□ 0.18
ABR-228ENST00000574437 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.17■□□□□ 0.181e-6■■■■■ 74.4
ABR-228ENST00000574437 RBM17Q96I25 401 aaKnown RBP16.17■□□□□ 0.18
ABR-228ENST00000574437 SELENOSQ9BQE4 189 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms