RNA–Protein interactions for RNA: ENST00000574234.1

TRIM25-208, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-208ENST00000574234 SH2B1Q9NRF2 756 aaPredicted RBP6.19□□□□□ -1.42
TRIM25-208ENST00000574234 RAI14Q9P0K7 980 aa6.19□□□□□ -1.42
TRIM25-208ENST00000574234 CNTN3Q9P232 1028 aa6.19□□□□□ -1.42
TRIM25-208ENST00000574234 ADAMTS8Q9UP79 889 aa6.19□□□□□ -1.42
TRIM25-208ENST00000574234 PCDHGC5Q9Y5F6 944 aa6.19□□□□□ -1.42
TRIM25-208ENST00000574234 COL4A3BPQ9Y5P4 624 aa6.19□□□□□ -1.42
TRIM25-208ENST00000574234 MRVI1Q9Y6F6 885 aa6.19□□□□□ -1.42
TRIM25-208ENST00000574234 BAZ2AQ9UIF9 1905 aaKnown RBP6.19□□□□□ -1.42
TRIM25-208ENST00000574234 DENND4AQ7Z401 1863 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 MINDY4BA8MYZ0 360 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 C5orf67F2Z3F1 127 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 APAF1O14727 1248 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 ATP2A1O14983 1001 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 VAMP4O75379 141 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 ATF7P17544 494 aaPredicted RBP6.18□□□□□ -1.42
TRIM25-208ENST00000574234 GRNP28799 593 aaKnown RBP6.18□□□□□ -1.42
TRIM25-208ENST00000574234 SHMT1P34896 483 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 GPC1P35052 558 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 IL15P40933 162 aaPredicted RBP6.18□□□□□ -1.42
TRIM25-208ENST00000574234 PURAQ00577 322 aaKnown RBP6.18□□□□□ -1.42
TRIM25-208ENST00000574234 RELBQ01201 579 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 ADAM15Q13444 863 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 IKBKEQ14164 716 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 MVPQ14764 893 aaKnown RBP6.18□□□□□ -1.42
TRIM25-208ENST00000574234 GPNMBQ14956 572 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 SEPT2Q15019 361 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 KIAA1755Q5JYT7 1200 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 SLC4A10Q6U841 1118 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 BTLAQ7Z6A9 289 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 TTC6Q86TZ1 520 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 FBXO11Q86XK2 927 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 CERS3Q8IU89 383 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 CCDC144CPQ8IYA2 1237 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 UBALD2Q8IYN6 164 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 CCDC155Q8N6L0 562 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 C1orf127Q8N9H9 656 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 EMID1Q96A84 441 aaPredicted RBP6.18□□□□□ -1.42
TRIM25-208ENST00000574234 ITPKCQ96DU7 683 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 HAUS7Q99871 368 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 TRIM56Q9BRZ2 755 aaKnown RBP6.18□□□□□ -1.42
TRIM25-208ENST00000574234 NT5C1AQ9BXI3 368 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 TEX13BQ9BXU2 312 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 SH2D4AQ9H788 454 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 VCPKMTQ9H867 229 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 ZNF395Q9H8N7 513 aaPredicted RBP6.18□□□□□ -1.42
TRIM25-208ENST00000574234 PCDH12Q9NPG4 1184 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 ASH1LQ9NR48 2969 aaKnown RBP6.18□□□□□ -1.42
TRIM25-208ENST00000574234 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.18□□□□□ -1.42
TRIM25-208ENST00000574234 SNTG2Q9NY99 539 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 HMG20BQ9P0W2 317 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 RALYQ9UKM9 306 aaKnown RBP6.18□□□□□ -1.42
TRIM25-208ENST00000574234 TMX2Q9Y320 296 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 KIAA1217Q5T5P2 1943 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 IL16Q14005 1332 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 PATJQ8NI35 1801 aa6.18□□□□□ -1.42
TRIM25-208ENST00000574234 FAM221BA6H8Z2 402 aa6.17□□□□□ -1.42
TRIM25-208ENST00000574234 GBP2P32456 591 aaPredicted RBP6.17□□□□□ -1.42
TRIM25-208ENST00000574234 RSPO4Q2I0M5 234 aaPredicted RBP6.17□□□□□ -1.42
TRIM25-208ENST00000574234 IQSEC1Q6DN90 963 aa6.17□□□□□ -1.42
TRIM25-208ENST00000574234 NAA16Q6N069 864 aaPredicted RBP6.17□□□□□ -1.42
TRIM25-208ENST00000574234 TMEM179Q6ZVK1 233 aa6.17□□□□□ -1.42
TRIM25-208ENST00000574234 FILIP1Q7Z7B0 1213 aa6.17□□□□□ -1.42
TRIM25-208ENST00000574234 TMEM192Q8IY95 271 aa6.17□□□□□ -1.42
TRIM25-208ENST00000574234 RUBCNQ92622 972 aa6.17□□□□□ -1.42
TRIM25-208ENST00000574234 DEPDC7Q96QD5 511 aa6.17□□□□□ -1.42
TRIM25-208ENST00000574234 TRIM55Q9BYV6 548 aa6.17□□□□□ -1.42
TRIM25-208ENST00000574234 PPP4R2Q9NY27 417 aa6.17□□□□□ -1.42
TRIM25-208ENST00000574234 LRP2BPQ9P2M1 347 aa6.17□□□□□ -1.42
TRIM25-208ENST00000574234 SAP30BPQ9UHR5 308 aaKnown RBP6.17□□□□□ -1.42
TRIM25-208ENST00000574234 PPP1R9AQ9ULJ8 1098 aa6.17□□□□□ -1.42
TRIM25-208ENST00000574234 SPTBN2O15020 2390 aa6.17□□□□□ -1.42
TRIM25-208ENST00000574234 MIA3Q5JRA6 1907 aa6.17□□□□□ -1.42
TRIM25-208ENST00000574234 ZZEF1O43149 2961 aa6.16□□□□□ -1.42
TRIM25-208ENST00000574234 A0A1W2PP55 124 aa6.16□□□□□ -1.42
TRIM25-208ENST00000574234 SOBPA7XYQ1 873 aa6.16□□□□□ -1.42
TRIM25-208ENST00000574234 DYNC1LI2O43237 492 aaPredicted RBP6.16□□□□□ -1.42
TRIM25-208ENST00000574234 GREM1O60565 184 aa6.16□□□□□ -1.42
TRIM25-208ENST00000574234 DNAJC6O75061 913 aa6.16□□□□□ -1.42
TRIM25-208ENST00000574234 AMHP03971 560 aa6.16□□□□□ -1.42
TRIM25-208ENST00000574234 RB1P06400 928 aa6.16□□□□□ -1.42
TRIM25-208ENST00000574234 SELPP16109 830 aa6.16□□□□□ -1.42
TRIM25-208ENST00000574234 SMPD1P17405 629 aa6.16□□□□□ -1.42
TRIM25-208ENST00000574234 GARTP22102 1010 aa6.16□□□□□ -1.42
TRIM25-208ENST00000574234 NDUFV1P49821 464 aa6.16□□□□□ -1.42
TRIM25-208ENST00000574234 CPT1AP50416 773 aa6.16□□□□□ -1.42
TRIM25-208ENST00000574234 RNF144AP50876 292 aaPredicted RBP6.16□□□□□ -1.42
TRIM25-208ENST00000574234 ATXN1P54253 815 aaKnown RBP6.16□□□□□ -1.42
TRIM25-208ENST00000574234 RRP1P56182 461 aaKnown RBP6.16□□□□□ -1.42
TRIM25-208ENST00000574234 TIMM10P62072 90 aa6.16□□□□□ -1.42
TRIM25-208ENST00000574234 GABPAQ06546 454 aa6.16□□□□□ -1.42
TRIM25-208ENST00000574234 ANGPT1Q15389 498 aa6.16□□□□□ -1.42
TRIM25-208ENST00000574234 FBXL19Q6PCT2 694 aa6.16□□□□□ -1.42
TRIM25-208ENST00000574234 LRRC8DQ7L1W4 858 aa6.16□□□□□ -1.42
TRIM25-208ENST00000574234 ADGRA1Q86SQ6 560 aa6.16□□□□□ -1.42
TRIM25-208ENST00000574234 SPICE1Q8N0Z3 855 aa6.16□□□□□ -1.42
TRIM25-208ENST00000574234 GPR161Q8N6U8 529 aaKnown RBP6.16□□□□□ -1.42
TRIM25-208ENST00000574234 KCNG4Q8TDN1 519 aa6.16□□□□□ -1.42
TRIM25-208ENST00000574234 HNRNPLLQ8WVV9 542 aaKnown RBP6.16□□□□□ -1.42
TRIM25-208ENST00000574234 PMEPA1Q969W9 287 aa6.16□□□□□ -1.42
TRIM25-208ENST00000574234 CHAMP1Q96JM3 812 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms