RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 LRCH2Q5VUJ6 765 aa12.81□□□□□ -0.36
RPAIN-214ENST00000574003 IER5Q5VY09 327 aa12.81□□□□□ -0.36
RPAIN-214ENST00000574003 CPLX2Q6PUV4 134 aaKnown RBP12.81□□□□□ -0.36
RPAIN-214ENST00000574003 DAGLBQ8NCG7 672 aa12.81□□□□□ -0.36
RPAIN-214ENST00000574003 FBXO22Q8NEZ5 403 aa12.81□□□□□ -0.36
RPAIN-214ENST00000574003 NECAB3Q96P71 396 aaPredicted RBP12.81□□□□□ -0.36
RPAIN-214ENST00000574003 SH2D3AQ9BRG2 576 aa12.81□□□□□ -0.36
RPAIN-214ENST00000574003 TMX1Q9H3N1 280 aa12.81□□□□□ -0.36
RPAIN-214ENST00000574003 DISC1Q9NRI5 854 aa12.81□□□□□ -0.36
RPAIN-214ENST00000574003 TCEAL9Q9UHQ7 104 aa12.81□□□□□ -0.36
RPAIN-214ENST00000574003 PADI3Q9ULW8 664 aa12.81□□□□□ -0.36
RPAIN-214ENST00000574003 NOC2LQ9Y3T9 749 aaKnown RBP12.81□□□□□ -0.36
RPAIN-214ENST00000574003 PCDHA10Q9Y5I2 948 aa12.81□□□□□ -0.36
RPAIN-214ENST00000574003 M0QZ92 97 aa12.8□□□□□ -0.36
RPAIN-214ENST00000574003 MGEA5O60502 916 aa12.8□□□□□ -0.36
RPAIN-214ENST00000574003 JAK2O60674 1132 aa12.8□□□□□ -0.36
RPAIN-214ENST00000574003 CENPBP07199 599 aaPredicted RBP12.8□□□□□ -0.36
RPAIN-214ENST00000574003 SLC26A2P50443 739 aa12.8□□□□□ -0.36
RPAIN-214ENST00000574003 KCNQ1P51787 676 aa12.8□□□□□ -0.36
RPAIN-214ENST00000574003 CLCN3P51790 818 aa12.8□□□□□ -0.36
RPAIN-214ENST00000574003 ANAPC15P60006 121 aa12.8□□□□□ -0.36
RPAIN-214ENST00000574003 NFX1Q12986 1120 aaKnown RBP12.8□□□□□ -0.36
RPAIN-214ENST00000574003 KIZQ2M2Z5 673 aa12.8□□□□□ -0.36
RPAIN-214ENST00000574003 EPC2Q52LR7 807 aa12.8□□□□□ -0.36
RPAIN-214ENST00000574003 TJAP1Q5JTD0 557 aa12.8□□□□□ -0.36
RPAIN-214ENST00000574003 ZNF484Q5JVG2 852 aa12.8□□□□□ -0.36
RPAIN-214ENST00000574003 SMAP1Q8IYB5 467 aaPredicted RBP12.8□□□□□ -0.36
RPAIN-214ENST00000574003 LRRC71Q8N4P6 559 aa12.8□□□□□ -0.36
RPAIN-214ENST00000574003 METTL13Q8N6R0 699 aa12.8□□□□□ -0.36
RPAIN-214ENST00000574003 BBXQ8WY36 941 aaPredicted RBP12.8□□□□□ -0.36
RPAIN-214ENST00000574003 ASB2Q96Q27 587 aa12.8□□□□□ -0.36
RPAIN-214ENST00000574003 PHF20Q9BVI0 1012 aa12.8□□□□□ -0.36
RPAIN-214ENST00000574003 TEKT3Q9BXF9 490 aa12.8□□□□□ -0.36
RPAIN-214ENST00000574003 ORC3Q9UBD5 711 aaPredicted RBP12.8□□□□□ -0.36
RPAIN-214ENST00000574003 IGSF9BQ9UPX0 1349 aa12.8□□□□□ -0.36
RPAIN-214ENST00000574003 NLRC5Q86WI3 1866 aa12.8□□□□□ -0.36
RPAIN-214ENST00000574003 COL4A6Q14031 1691 aa12.8□□□□□ -0.36
RPAIN-214ENST00000574003 WDR64B1ANS9 1081 aa12.79□□□□□ -0.36
RPAIN-214ENST00000574003 PSMD10O75832 226 aa12.79□□□□□ -0.36
RPAIN-214ENST00000574003 LINC00271P0C7V0 271 aa12.79□□□□□ -0.36
RPAIN-214ENST00000574003 NEK4P51957 841 aa12.79□□□□□ -0.36
RPAIN-214ENST00000574003 MRPS5P82675 430 aaKnown RBP12.79□□□□□ -0.36
RPAIN-214ENST00000574003 PRKCEQ02156 737 aa12.79□□□□□ -0.36
RPAIN-214ENST00000574003 PAK2Q13177 524 aa12.79□□□□□ -0.36
RPAIN-214ENST00000574003 NONOQ15233 471 aaKnown RBP eCLIP12.79□□□□□ -0.36
RPAIN-214ENST00000574003 LETM2Q2VYF4 491 aa12.79□□□□□ -0.36
RPAIN-214ENST00000574003 Q4G0T1 1027 aa12.79□□□□□ -0.36
RPAIN-214ENST00000574003 PAN2Q504Q3 1202 aaKnown RBP12.79□□□□□ -0.36
RPAIN-214ENST00000574003 PIK3AP1Q6ZUJ8 805 aa12.79□□□□□ -0.36
RPAIN-214ENST00000574003 MIER3Q7Z3K6 550 aa12.79□□□□□ -0.36
RPAIN-214ENST00000574003 TMEM192Q8IY95 271 aa12.79□□□□□ -0.36
RPAIN-214ENST00000574003 ETNPPLQ8TBG4 499 aa12.79□□□□□ -0.36
RPAIN-214ENST00000574003 TNPO1Q92973 898 aaKnown RBP12.79□□□□□ -0.36
RPAIN-214ENST00000574003 IL17RAQ96F46 866 aa12.79□□□□□ -0.36
RPAIN-214ENST00000574003 MBOAT7Q96N66 472 aa12.79□□□□□ -0.36
RPAIN-214ENST00000574003 OSMRQ99650 979 aa12.79□□□□□ -0.36
RPAIN-214ENST00000574003 DDX25Q9UHL0 483 aaKnown RBP12.79□□□□□ -0.36
RPAIN-214ENST00000574003 COL1A2P08123 1366 aa12.79□□□□□ -0.36
RPAIN-214ENST00000574003 CYP3A7-CYP3A51PA0A087WV96 503 aa12.78□□□□□ -0.36
RPAIN-214ENST00000574003 EML1O00423 815 aa12.78□□□□□ -0.36
RPAIN-214ENST00000574003 CDKL5O76039 1030 aa12.78□□□□□ -0.36
RPAIN-214ENST00000574003 STBD1O95210 358 aa12.78□□□□□ -0.36
RPAIN-214ENST00000574003 OATP04181 439 aa12.78□□□□□ -0.36
RPAIN-214ENST00000574003 CYP3A7P24462 503 aa12.78□□□□□ -0.36
RPAIN-214ENST00000574003 NR5A1Q13285 461 aa12.78□□□□□ -0.36
RPAIN-214ENST00000574003 DRP2Q13474 957 aa12.78□□□□□ -0.36
RPAIN-214ENST00000574003 GPM6BQ13491 265 aa12.78□□□□□ -0.36
RPAIN-214ENST00000574003 EFCAB12Q6NXP0 572 aa12.78□□□□□ -0.36
RPAIN-214ENST00000574003 KRT25Q7Z3Z0 450 aa12.78□□□□□ -0.36
RPAIN-214ENST00000574003 FAM228AQ86W67 206 aa12.78□□□□□ -0.36
RPAIN-214ENST00000574003 NME8Q8N427 588 aa12.78□□□□□ -0.36
RPAIN-214ENST00000574003 BANK1Q8NDB2 785 aa12.78□□□□□ -0.36
RPAIN-214ENST00000574003 ATXN2LQ8WWM7 1075 aaKnown RBP12.78□□□□□ -0.36
RPAIN-214ENST00000574003 GTF3C6Q969F1 213 aa12.78□□□□□ -0.36
RPAIN-214ENST00000574003 RIT2Q99578 217 aa12.78□□□□□ -0.36
RPAIN-214ENST00000574003 RC3H2Q9HBD1 1191 aaKnown RBP12.78□□□□□ -0.36
RPAIN-214ENST00000574003 ERVK-5Q9HDB9 667 aa12.78□□□□□ -0.36
RPAIN-214ENST00000574003 ST3GAL5Q9UNP4 418 aa12.78□□□□□ -0.36
RPAIN-214ENST00000574003 STK36Q9NRP7 1315 aa12.78□□□□□ -0.36
RPAIN-214ENST00000574003 KDM3AQ9Y4C1 1321 aa12.78□□□□□ -0.36
RPAIN-214ENST00000574003 CCDC194A0A1B0GVG4 234 aa12.77□□□□□ -0.37
RPAIN-214ENST00000574003 WNT7AO00755 349 aa12.77□□□□□ -0.37
RPAIN-214ENST00000574003 GPR32O75388 356 aa12.77□□□□□ -0.37
RPAIN-214ENST00000574003 RPS6KA5O75582 802 aa12.77□□□□□ -0.37
RPAIN-214ENST00000574003 FGFR4P22455 802 aa12.77□□□□□ -0.37
RPAIN-214ENST00000574003 CTNNB1P35222 781 aa12.77□□□□□ -0.37
RPAIN-214ENST00000574003 MTERF2Q49AM1 385 aa12.77□□□□□ -0.37
RPAIN-214ENST00000574003 GALNT17Q6IS24 598 aa12.77□□□□□ -0.37
RPAIN-214ENST00000574003 B3GNT9Q6UX72 402 aa12.77□□□□□ -0.37
RPAIN-214ENST00000574003 FIBCD1Q8N539 461 aa12.77□□□□□ -0.37
RPAIN-214ENST00000574003 LINC01465Q8N7H1 131 aa12.77□□□□□ -0.37
RPAIN-214ENST00000574003 NSUN7Q8NE18 718 aaKnown RBP12.77□□□□□ -0.37
RPAIN-214ENST00000574003 ADAMTS19Q8TE59 1207 aa12.77□□□□□ -0.37
RPAIN-214ENST00000574003 ZNF689Q96CS4 500 aaPredicted RBP12.77□□□□□ -0.37
RPAIN-214ENST00000574003 C22orf23Q9BZE7 217 aa12.77□□□□□ -0.37
RPAIN-214ENST00000574003 TSPYL2Q9H2G4 693 aaPredicted RBP12.77□□□□□ -0.37
RPAIN-214ENST00000574003 HCSTQ9UBK5 93 aa12.77□□□□□ -0.37
RPAIN-214ENST00000574003 SEPT9Q9UHD8 586 aaPredicted RBP12.77□□□□□ -0.37
RPAIN-214ENST00000574003 ATG2AQ2TAZ0 1938 aa12.77□□□□□ -0.37
RPAIN-214ENST00000574003 ADGRA3Q8IWK6 1321 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms