RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 ANAPC15P60006 121 aa11.32□□□□□ -0.6
RPA1-206ENST00000573994 MGAT3Q09327 533 aa11.32□□□□□ -0.6
RPA1-206ENST00000573994 NPY5RQ15761 445 aa11.32□□□□□ -0.6
RPA1-206ENST00000573994 FAM160B1Q5W0V3 765 aa11.32□□□□□ -0.6
RPA1-206ENST00000573994 PDXDC2PQ6P474 469 aa11.32□□□□□ -0.6
RPA1-206ENST00000573994 ABHD15Q6UXT9 468 aa11.32□□□□□ -0.6
RPA1-206ENST00000573994 PLPPR4Q7Z2D5 763 aa11.32□□□□□ -0.6
RPA1-206ENST00000573994 TRMT1LQ7Z2T5 733 aaKnown RBP11.32□□□□□ -0.6
RPA1-206ENST00000573994 RSPH3Q86UC2 560 aa11.32□□□□□ -0.6
RPA1-206ENST00000573994 FAM177A1Q8N128 213 aaPredicted RBP11.32□□□□□ -0.6
RPA1-206ENST00000573994 NECAB1Q8N987 351 aa11.32□□□□□ -0.6
RPA1-206ENST00000573994 TBCKQ8TEA7 893 aa11.32□□□□□ -0.6
RPA1-206ENST00000573994 GJA10Q969M2 543 aa11.32□□□□□ -0.6
RPA1-206ENST00000573994 IFIH1Q9BYX4 1025 aaKnown RBP11.32□□□□□ -0.6
RPA1-206ENST00000573994 ZNF302Q9NR11 478 aa11.32□□□□□ -0.6
RPA1-206ENST00000573994 SH3GLB2Q9NR46 395 aa11.32□□□□□ -0.6
RPA1-206ENST00000573994 MTUS1Q9ULD2 1270 aa11.32□□□□□ -0.6
RPA1-206ENST00000573994 PCDHA4Q9UN74 947 aa11.32□□□□□ -0.6
RPA1-206ENST00000573994 VPS9D1Q9Y2B5 631 aa11.32□□□□□ -0.6
RPA1-206ENST00000573994 CDY2AQ9Y6F7 541 aa11.32□□□□□ -0.6
RPA1-206ENST00000573994 TRIP12Q14669 1992 aaPredicted RBP11.32□□□□□ -0.6
RPA1-206ENST00000573994 TRANK1O15050 2925 aa11.31□□□□□ -0.6
RPA1-206ENST00000573994 IGKV6D-21A0A0A0MT36 114 aa11.31□□□□□ -0.6
RPA1-206ENST00000573994 RRN3P2A6NIE6 340 aa11.31□□□□□ -0.6
RPA1-206ENST00000573994 MSH4O15457 936 aa11.31□□□□□ -0.6
RPA1-206ENST00000573994 CHMP2AO43633 222 aa11.31□□□□□ -0.6
RPA1-206ENST00000573994 ATG7O95352 703 aa11.31□□□□□ -0.6
RPA1-206ENST00000573994 RPLP2P05387 115 aaKnown RBP11.31□□□□□ -0.6
RPA1-206ENST00000573994 CIITAP33076 1130 aa11.31□□□□□ -0.6
RPA1-206ENST00000573994 MRPS6P82932 125 aaKnown RBP11.31□□□□□ -0.6
RPA1-206ENST00000573994 LPIN1Q14693 890 aa11.31□□□□□ -0.6
RPA1-206ENST00000573994 FAM26DQ5JW98 314 aa11.31□□□□□ -0.6
RPA1-206ENST00000573994 KRT40Q6A162 431 aa11.31□□□□□ -0.6
RPA1-206ENST00000573994 SWSAP1Q6NVH7 229 aa11.31□□□□□ -0.6
RPA1-206ENST00000573994 MIS18BP1Q6P0N0 1132 aa11.31□□□□□ -0.6
RPA1-206ENST00000573994 CKAP2LQ8IYA6 745 aa11.31□□□□□ -0.6
RPA1-206ENST00000573994 BLIDQ8IZY5 108 aa11.31□□□□□ -0.6
RPA1-206ENST00000573994 ATP8B4Q8TF62 1192 aa11.31□□□□□ -0.6
RPA1-206ENST00000573994 GDPD5Q8WTR4 605 aa11.31□□□□□ -0.6
RPA1-206ENST00000573994 RTN4Q9NQC3 1192 aaKnown RBP11.31□□□□□ -0.6
RPA1-206ENST00000573994 GJB4Q9NTQ9 266 aa11.31□□□□□ -0.6
RPA1-206ENST00000573994 TBC1D22BQ9NU19 505 aa11.31□□□□□ -0.6
RPA1-206ENST00000573994 STK36Q9NRP7 1315 aa11.31□□□□□ -0.6
RPA1-206ENST00000573994 PTPRSQ13332 1948 aa11.31□□□□□ -0.6
RPA1-206ENST00000573994 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.3□□□□□ -0.6
RPA1-206ENST00000573994 LINC01553A4QN01 128 aa11.3□□□□□ -0.6
RPA1-206ENST00000573994 UPP2O95045 317 aa11.3□□□□□ -0.6
RPA1-206ENST00000573994 CTDNEP1O95476 244 aa11.3□□□□□ -0.6
RPA1-206ENST00000573994 ATP4AP20648 1035 aa11.3□□□□□ -0.6
RPA1-206ENST00000573994 KRT76Q01546 638 aa11.3□□□□□ -0.6
RPA1-206ENST00000573994 CAMK2BQ13554 666 aa11.3□□□□□ -0.6
RPA1-206ENST00000573994 FBXO47Q5MNV8 452 aa11.3□□□□□ -0.6
RPA1-206ENST00000573994 ZNF746Q6NUN9 644 aaPredicted RBP11.3□□□□□ -0.6
RPA1-206ENST00000573994 DAGLBQ8NCG7 672 aa11.3□□□□□ -0.6
RPA1-206ENST00000573994 PPP1R16BQ96T49 567 aa11.3□□□□□ -0.6
RPA1-206ENST00000573994 RAD9AQ99638 391 aa11.3□□□□□ -0.6
RPA1-206ENST00000573994 GABBR1Q9UBS5 961 aa11.3□□□□□ -0.6
RPA1-206ENST00000573994 SAMM50Q9Y512 469 aa11.3□□□□□ -0.6
RPA1-206ENST00000573994 PCDHA2Q9Y5H9 948 aa11.3□□□□□ -0.6
RPA1-206ENST00000573994 XIRP2A4UGR9 3374 aa11.3□□□□□ -0.6
RPA1-206ENST00000573994 GOLGA8CPA6NN73 597 aa11.29□□□□□ -0.6
RPA1-206ENST00000573994 WDR64B1ANS9 1081 aa11.29□□□□□ -0.6
RPA1-206ENST00000573994 ZBTB42B2RXF5 422 aa11.29□□□□□ -0.6
RPA1-206ENST00000573994 M0R2N6 131 aa11.29□□□□□ -0.6
RPA1-206ENST00000573994 DLL1O00548 723 aa11.29□□□□□ -0.6
RPA1-206ENST00000573994 HBP1O60381 514 aa11.29□□□□□ -0.6
RPA1-206ENST00000573994 JAK2O60674 1132 aa11.29□□□□□ -0.6
RPA1-206ENST00000573994 GAS7O60861 476 aa11.29□□□□□ -0.6
RPA1-206ENST00000573994 PSAPP07602 524 aa11.29□□□□□ -0.6
RPA1-206ENST00000573994 CD52P31358 61 aa11.29□□□□□ -0.6
RPA1-206ENST00000573994 SLC26A2P50443 739 aa11.29□□□□□ -0.6
RPA1-206ENST00000573994 GRB10Q13322 594 aa11.29□□□□□ -0.6
RPA1-206ENST00000573994 NONOQ15233 471 aaKnown RBP eCLIP11.29□□□□□ -0.6
RPA1-206ENST00000573994 ANKRD1Q15327 319 aa11.29□□□□□ -0.6
RPA1-206ENST00000573994 UGCGQ16739 394 aa11.29□□□□□ -0.6
RPA1-206ENST00000573994 ME3Q16798 604 aa11.29□□□□□ -0.6
RPA1-206ENST00000573994 INF2Q27J81 1249 aa11.29□□□□□ -0.6
RPA1-206ENST00000573994 LRCH2Q5VUJ6 765 aa11.29□□□□□ -0.6
RPA1-206ENST00000573994 MTHFD1LQ6UB35 978 aa11.29□□□□□ -0.6
RPA1-206ENST00000573994 TSHZ1Q6ZSZ6 1077 aa11.29□□□□□ -0.6
RPA1-206ENST00000573994 FAM43BQ6ZT52 329 aaPredicted RBP11.29□□□□□ -0.6
RPA1-206ENST00000573994 RPAINQ86UA6 219 aa11.29□□□□□ -0.6
RPA1-206ENST00000573994 SMAP1Q8IYB5 467 aaPredicted RBP11.29□□□□□ -0.6
RPA1-206ENST00000573994 APBB2Q92870 758 aa11.29□□□□□ -0.6
RPA1-206ENST00000573994 SLC5A5Q92911 643 aa11.29□□□□□ -0.6
RPA1-206ENST00000573994 GTF3C6Q969F1 213 aa11.29□□□□□ -0.6
RPA1-206ENST00000573994 YME1L1Q96TA2 773 aa11.29□□□□□ -0.6
RPA1-206ENST00000573994 PHF20Q9BVI0 1012 aa11.29□□□□□ -0.6
RPA1-206ENST00000573994 C22orf23Q9BZE7 217 aa11.29□□□□□ -0.6
RPA1-206ENST00000573994 UNC45AQ9H3U1 944 aa11.29□□□□□ -0.6
RPA1-206ENST00000573994 AGO3Q9H9G7 860 aaKnown RBP11.29□□□□□ -0.6
RPA1-206ENST00000573994 ORC3Q9UBD5 711 aaPredicted RBP11.29□□□□□ -0.6
RPA1-206ENST00000573994 GINS2Q9Y248 185 aa11.29□□□□□ -0.6
RPA1-206ENST00000573994 TRPV2Q9Y5S1 764 aa11.29□□□□□ -0.6
RPA1-206ENST00000573994 IGSF9BQ9UPX0 1349 aa11.29□□□□□ -0.6
RPA1-206ENST00000573994 REV3LO60673 3130 aa11.28□□□□□ -0.6
RPA1-206ENST00000573994 COL4A4P53420 1690 aaPredicted RBP11.28□□□□□ -0.6
RPA1-206ENST00000573994 CCDC194A0A1B0GVG4 234 aa11.28□□□□□ -0.6
RPA1-206ENST00000573994 M0QZ92 97 aa11.28□□□□□ -0.6
RPA1-206ENST00000573994 SLC37A4O43826 429 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms