RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 MARCH6O60337 910 aa31.21■■■□□ 2.59
SCARF1-207ENST00000573867 IKBKEQ14164 716 aa31.21■■■□□ 2.59
SCARF1-207ENST00000573867 TARBP2Q15633 366 aaKnown RBP31.21■■■□□ 2.59
SCARF1-207ENST00000573867 HERC6Q8IVU3 1022 aa31.21■■■□□ 2.59
SCARF1-207ENST00000573867 SLFN12Q8IYM2 578 aa31.21■■■□□ 2.59
SCARF1-207ENST00000573867 LINC01465Q8N7H1 131 aa31.21■■■□□ 2.59
SCARF1-207ENST00000573867 PHOSPHO2Q8TCD6 241 aa31.21■■■□□ 2.59
SCARF1-207ENST00000573867 SEPT8Q92599 483 aa31.21■■■□□ 2.59
SCARF1-207ENST00000573867 TRPV2Q9Y5S1 764 aa31.21■■■□□ 2.59
SCARF1-207ENST00000573867 CHD7Q9P2D1 2997 aa31.21■■■□□ 2.59
SCARF1-207ENST00000573867 TMEM265A0A087WTH1 108 aa31.2■■■□□ 2.59
SCARF1-207ENST00000573867 U2AF2P26368 475 aaKnown RBP eCLIP31.2■■■□□ 2.59
SCARF1-207ENST00000573867 MCM7P33993 719 aa31.2■■■□□ 2.59
SCARF1-207ENST00000573867 KCNJ6P48051 423 aa31.2■■■□□ 2.59
SCARF1-207ENST00000573867 RAB30Q15771 203 aa31.2■■■□□ 2.59
SCARF1-207ENST00000573867 NCAPH2Q6IBW4 605 aa31.2■■■□□ 2.59
SCARF1-207ENST00000573867 CEP89Q96ST8 783 aa31.2■■■□□ 2.59
SCARF1-207ENST00000573867 SH2D3AQ9BRG2 576 aa31.2■■■□□ 2.59
SCARF1-207ENST00000573867 IFIH1Q9BYX4 1025 aaKnown RBP31.2■■■□□ 2.59
SCARF1-207ENST00000573867 AGO3Q9H9G7 860 aaKnown RBP31.2■■■□□ 2.59
SCARF1-207ENST00000573867 NRBP2Q9NSY0 501 aa31.2■■■□□ 2.59
SCARF1-207ENST00000573867 BAG4O95429 457 aaKnown RBP31.19■■■□□ 2.58
SCARF1-207ENST00000573867 CUL4AQ13619 759 aa31.19■■■□□ 2.58
SCARF1-207ENST00000573867 NBR1Q14596 966 aa31.19■■■□□ 2.58
SCARF1-207ENST00000573867 XKR3Q5GH77 459 aa31.19■■■□□ 2.58
SCARF1-207ENST00000573867 CDHR5Q9HBB8 845 aa31.19■■■□□ 2.58
SCARF1-207ENST00000573867 RGL1Q9NZL6 768 aa31.19■■■□□ 2.58
SCARF1-207ENST00000573867 SEPT9Q9UHD8 586 aaPredicted RBP31.19■■■□□ 2.58
SCARF1-207ENST00000573867 MSRAQ9UJ68 235 aa31.19■■■□□ 2.58
SCARF1-207ENST00000573867 CEP131Q9UPN4 1083 aa31.19■■■□□ 2.58
SCARF1-207ENST00000573867 PCDHA11Q9Y5I1 949 aa31.19■■■□□ 2.58
SCARF1-207ENST00000573867 COL6A3P12111 3177 aa31.18■■■□□ 2.58
SCARF1-207ENST00000573867 ARHGEF15O94989 841 aa31.18■■■□□ 2.58
SCARF1-207ENST00000573867 RPLP2P05387 115 aaKnown RBP31.18■■■□□ 2.58
SCARF1-207ENST00000573867 CLCN3P51790 818 aa31.18■■■□□ 2.58
SCARF1-207ENST00000573867 PSMC5P62195 406 aa31.18■■■□□ 2.58
SCARF1-207ENST00000573867 EPHA7Q15375 998 aa31.18■■■□□ 2.58
SCARF1-207ENST00000573867 IER5Q5VY09 327 aa31.18■■■□□ 2.58
SCARF1-207ENST00000573867 NME8Q8N427 588 aa31.18■■■□□ 2.58
SCARF1-207ENST00000573867 LRRC71Q8N4P6 559 aa31.18■■■□□ 2.58
SCARF1-207ENST00000573867 NIFKQ9BYG3 293 aaKnown RBP31.18■■■□□ 2.58
SCARF1-207ENST00000573867 CELF4Q9BZC1 486 aaKnown RBP31.18■■■□□ 2.58
SCARF1-207ENST00000573867 ZNF576Q9H609 170 aa31.18■■■□□ 2.58
SCARF1-207ENST00000573867 MICAL3Q7RTP6 2002 aa31.18■■■□□ 2.58
SCARF1-207ENST00000573867 LOC101059915A0A1B0GWI6 518 aaPredicted RBP31.17■■■□□ 2.58
SCARF1-207ENST00000573867 TXKP42681 527 aa31.17■■■□□ 2.58
SCARF1-207ENST00000573867 ZNF174Q15697 407 aa31.17■■■□□ 2.58
SCARF1-207ENST00000573867 ANO5Q75V66 913 aa31.17■■■□□ 2.58
SCARF1-207ENST00000573867 METTL13Q8N6R0 699 aa31.17■■■□□ 2.58
SCARF1-207ENST00000573867 DYDC2Q96IM9 177 aa31.17■■■□□ 2.58
SCARF1-207ENST00000573867 TTC12Q9H892 705 aaPredicted RBP31.17■■■□□ 2.58
SCARF1-207ENST00000573867 PCDHA12Q9UN75 941 aa31.17■■■□□ 2.58
SCARF1-207ENST00000573867 KDM3AQ9Y4C1 1321 aa31.17■■■□□ 2.58
SCARF1-207ENST00000573867 EFCAB14O75071 495 aa31.16■■■□□ 2.58
SCARF1-207ENST00000573867 VTNP04004 478 aa31.16■■■□□ 2.58
SCARF1-207ENST00000573867 P4HBP07237 508 aaKnown RBP31.16■■■□□ 2.58
SCARF1-207ENST00000573867 CD52P31358 61 aa31.16■■■□□ 2.58
SCARF1-207ENST00000573867 QARSP47897 775 aaKnown RBP31.16■■■□□ 2.58
SCARF1-207ENST00000573867 TOB1P50616 345 aaPredicted RBP31.16■■■□□ 2.58
SCARF1-207ENST00000573867 GNL2Q13823 731 aaKnown RBP31.16■■■□□ 2.58
SCARF1-207ENST00000573867 GRIN2CQ14957 1233 aa31.16■■■□□ 2.58
SCARF1-207ENST00000573867 MTERF2Q49AM1 385 aa31.16■■■□□ 2.58
SCARF1-207ENST00000573867 TTC38Q5R3I4 469 aa31.16■■■□□ 2.58
SCARF1-207ENST00000573867 PLA2G4FQ68DD2 849 aa31.16■■■□□ 2.58
SCARF1-207ENST00000573867 TSHZ1Q6ZSZ6 1077 aa31.16■■■□□ 2.58
SCARF1-207ENST00000573867 PPP1R16BQ96T49 567 aa31.16■■■□□ 2.58
SCARF1-207ENST00000573867 SMC3Q9UQE7 1217 aa31.16■■■□□ 2.58
SCARF1-207ENST00000573867 KIF3AQ9Y496 699 aa31.16■■■□□ 2.58
SCARF1-207ENST00000573867 EVPLQ92817 2033 aa31.15■■■□□ 2.58
SCARF1-207ENST00000573867 DDX11L8A8MPP1 907 aa31.15■■■□□ 2.58
SCARF1-207ENST00000573867 MAGEB2O15479 319 aa31.15■■■□□ 2.58
SCARF1-207ENST00000573867 EFCAB12Q6NXP0 572 aa31.15■■■□□ 2.58
SCARF1-207ENST00000573867 TMEM40Q8WWA1 233 aa31.15■■■□□ 2.58
SCARF1-207ENST00000573867 APBB2Q92870 758 aa31.15■■■□□ 2.58
SCARF1-207ENST00000573867 CDX2Q99626 313 aaPredicted RBP31.15■■■□□ 2.58
SCARF1-207ENST00000573867 LXNQ9BS40 222 aa31.15■■■□□ 2.58
SCARF1-207ENST00000573867 CYP4A11Q02928 519 aa31.14■■■□□ 2.58
SCARF1-207ENST00000573867 DRP2Q13474 957 aa31.14■■■□□ 2.58
SCARF1-207ENST00000573867 ZNF579Q8NAF0 562 aaKnown RBP31.14■■■□□ 2.58
SCARF1-207ENST00000573867 ZSCAN21Q9Y5A6 473 aaPredicted RBP31.14■■■□□ 2.58
SCARF1-207ENST00000573867 LCHNA4D1U4 455 aa31.13■■■□□ 2.57
SCARF1-207ENST00000573867 M0QZ92 97 aa31.13■■■□□ 2.57
SCARF1-207ENST00000573867 GPR32O75388 356 aa31.13■■■□□ 2.57
SCARF1-207ENST00000573867 CA3P07451 260 aa31.13■■■□□ 2.57
SCARF1-207ENST00000573867 TRAPPC10P48553 1259 aa31.13■■■□□ 2.57
SCARF1-207ENST00000573867 CTTNQ14247 550 aaKnown RBP31.13■■■□□ 2.57
SCARF1-207ENST00000573867 KIZQ2M2Z5 673 aa31.13■■■□□ 2.57
SCARF1-207ENST00000573867 FAM117BQ6P1L5 589 aa31.13■■■□□ 2.57
SCARF1-207ENST00000573867 C4orf32Q8N8J7 132 aa31.13■■■□□ 2.57
SCARF1-207ENST00000573867 LINC01599Q8WXQ3 324 aa31.13■■■□□ 2.57
SCARF1-207ENST00000573867 EIF2AK1Q9BQI3 630 aaKnown RBP31.13■■■□□ 2.57
SCARF1-207ENST00000573867 GINS2Q9Y248 185 aa31.13■■■□□ 2.57
SCARF1-207ENST00000573867 SQORQ9Y6N5 450 aa31.13■■■□□ 2.57
SCARF1-207ENST00000573867 POTEMA6NI47 508 aa31.12■■■□□ 2.57
SCARF1-207ENST00000573867 ZBTB39O15060 712 aa31.12■■■□□ 2.57
SCARF1-207ENST00000573867 SLITRK3O94933 977 aa31.12■■■□□ 2.57
SCARF1-207ENST00000573867 GJB5O95377 273 aa31.12■■■□□ 2.57
SCARF1-207ENST00000573867 NPEPPSP55786 919 aa31.12■■■□□ 2.57
SCARF1-207ENST00000573867 TBC1D8BQ0IIM8 1120 aa31.12■■■□□ 2.57
SCARF1-207ENST00000573867 C4orf19Q8IY42 314 aa31.12■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms